RNA–Protein interactions for RNA: ENST00000532581.5

GRAMD1B-208, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 2,615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-208ENST00000532581 K7ERS5 55 aa6.79□□□□□ -1.32
GRAMD1B-208ENST00000532581 KRTAP10-8P60410 259 aa6.77□□□□□ -1.33
GRAMD1B-208ENST00000532581 RPL37P61927 97 aaKnown RBP6.77□□□□□ -1.33
GRAMD1B-208ENST00000532581 KRTAP3-3Q9BYR6 98 aa6.74□□□□□ -1.33
GRAMD1B-208ENST00000532581 P0C880 135 aa6.73□□□□□ -1.33
GRAMD1B-208ENST00000532581 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
GRAMD1B-208ENST00000532581 HSPG2P98160 4391 aa6.73□□□□□ -1.33
GRAMD1B-208ENST00000532581 KRTAP10-6P60371 365 aaPredicted RBP6.72□□□□□ -1.33
GRAMD1B-208ENST00000532581 XP32Q5T750 250 aa6.7□□□□□ -1.34
GRAMD1B-208ENST00000532581 S4R3F8 94 aa6.68□□□□□ -1.34
GRAMD1B-208ENST00000532581 Q5VSD8 79 aa6.67□□□□□ -1.34
GRAMD1B-208ENST00000532581 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
GRAMD1B-208ENST00000532581 KMT2CQ8NEZ4 4911 aaKnown RBP6.66□□□□□ -1.34
GRAMD1B-208ENST00000532581 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
GRAMD1B-208ENST00000532581 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
GRAMD1B-208ENST00000532581 MYCBP2O75592 4640 aa6.59□□□□□ -1.36
GRAMD1B-208ENST00000532581 A0A0D9SG42 100 aa6.58□□□□□ -1.36
GRAMD1B-208ENST00000532581 RYR1P21817 5038 aa6.55□□□□□ -1.36
GRAMD1B-208ENST00000532581 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
GRAMD1B-208ENST00000532581 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
GRAMD1B-208ENST00000532581 KRTAP17-1Q9BYP8 105 aa6.48□□□□□ -1.37
GRAMD1B-208ENST00000532581 TPRXLQ17RH7 258 aa6.46□□□□□ -1.37
GRAMD1B-208ENST00000532581 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.37
GRAMD1B-208ENST00000532581 NDUFAF8A1L188 74 aa6.46□□□□□ -1.38
GRAMD1B-208ENST00000532581 KRTAP12-2P59991 146 aa6.45□□□□□ -1.38
GRAMD1B-208ENST00000532581 RYR3Q15413 4870 aa6.43□□□□□ -1.38
GRAMD1B-208ENST00000532581 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
GRAMD1B-208ENST00000532581 LPAP08519 4548 aa6.4□□□□□ -1.38
GRAMD1B-208ENST00000532581 M0QZ58 72 aa6.4□□□□□ -1.39
GRAMD1B-208ENST00000532581 KIAA1109Q2LD37 5005 aa6.39□□□□□ -1.39
GRAMD1B-208ENST00000532581 LRP2P98164 4655 aa6.37□□□□□ -1.39
GRAMD1B-208ENST00000532581 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
GRAMD1B-208ENST00000532581 R4GN34 69 aa6.19□□□□□ -1.42
GRAMD1B-208ENST00000532581 SEC61BP60468 96 aaKnown RBP6.19□□□□□ -1.42
GRAMD1B-208ENST00000532581 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
GRAMD1B-208ENST00000532581 EPPK1P58107 5090 aaKnown RBP6.18□□□□□ -1.42
GRAMD1B-208ENST00000532581 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
GRAMD1B-208ENST00000532581 A0A0A0MQY5 61 aa6.15□□□□□ -1.43
GRAMD1B-208ENST00000532581 KRTAP4-5Q9BYR2 181 aa6.12□□□□□ -1.43
GRAMD1B-208ENST00000532581 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
GRAMD1B-208ENST00000532581 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
GRAMD1B-208ENST00000532581 KRTAP19-2Q3LHN2 52 aa6□□□□□ -1.45
GRAMD1B-208ENST00000532581 J3QL48 77 aa5.98□□□□□ -1.45
GRAMD1B-208ENST00000532581 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
GRAMD1B-208ENST00000532581 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
GRAMD1B-208ENST00000532581 HERC2O95714 4834 aa5.88□□□□□ -1.47
GRAMD1B-208ENST00000532581 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
GRAMD1B-208ENST00000532581 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
GRAMD1B-208ENST00000532581 FLGP20930 4061 aaPredicted RBP5.85□□□□□ -1.47
GRAMD1B-208ENST00000532581 BIRC6Q9NR09 4857 aa5.83□□□□□ -1.48
GRAMD1B-208ENST00000532581 HERC1Q15751 4861 aa5.78□□□□□ -1.48
GRAMD1B-208ENST00000532581 MUC2Q02817 5179 aa5.74□□□□□ -1.49
GRAMD1B-208ENST00000532581 TNP1P09430 55 aa5.69□□□□□ -1.5
GRAMD1B-208ENST00000532581 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
GRAMD1B-208ENST00000532581 PCLOQ9Y6V0 5065 aa5.64□□□□□ -1.51
GRAMD1B-208ENST00000532581 HMCN2Q8NDA2 5059 aa5.62□□□□□ -1.51
GRAMD1B-208ENST00000532581 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
GRAMD1B-208ENST00000532581 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.52
GRAMD1B-208ENST00000532581 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
GRAMD1B-208ENST00000532581 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
GRAMD1B-208ENST00000532581 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
GRAMD1B-208ENST00000532581 M0R2T5 61 aa5.45□□□□□ -1.54
GRAMD1B-208ENST00000532581 MT1HP80294 61 aa5.44□□□□□ -1.54
GRAMD1B-208ENST00000532581 MT2AP02795 61 aa5.38□□□□□ -1.55
GRAMD1B-208ENST00000532581 MT1FP04733 61 aa5.38□□□□□ -1.55
GRAMD1B-208ENST00000532581 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
GRAMD1B-208ENST00000532581 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
GRAMD1B-208ENST00000532581 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
GRAMD1B-208ENST00000532581 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
GRAMD1B-208ENST00000532581 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
GRAMD1B-208ENST00000532581 UBR4Q5T4S7 5183 aa5.27□□□□□ -1.57
GRAMD1B-208ENST00000532581 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
GRAMD1B-208ENST00000532581 MT1BP07438 61 aa5.23□□□□□ -1.57
GRAMD1B-208ENST00000532581 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
GRAMD1B-208ENST00000532581 MT1XP80297 61 aa5.22□□□□□ -1.57
GRAMD1B-208ENST00000532581 PRO2289Q9P1D8 64 aa5.15□□□□□ -1.58
GRAMD1B-208ENST00000532581 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
GRAMD1B-208ENST00000532581 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
GRAMD1B-208ENST00000532581 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
GRAMD1B-208ENST00000532581 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
GRAMD1B-208ENST00000532581 INE1O15225 51 aa4.95□□□□□ -1.62
GRAMD1B-208ENST00000532581 LCE2BO14633 110 aa4.87□□□□□ -1.63
GRAMD1B-208ENST00000532581 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
GRAMD1B-208ENST00000532581 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
GRAMD1B-208ENST00000532581 LCE2AQ5TA79 106 aaPredicted RBP4.73□□□□□ -1.65
GRAMD1B-208ENST00000532581 USH2AO75445 5202 aa4.7□□□□□ -1.66
GRAMD1B-208ENST00000532581 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
GRAMD1B-208ENST00000532581 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
GRAMD1B-208ENST00000532581 KMT2DO14686 5537 aa4.68□□□□□ -1.66
GRAMD1B-208ENST00000532581 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
GRAMD1B-208ENST00000532581 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
GRAMD1B-208ENST00000532581 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
GRAMD1B-208ENST00000532581 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.68
GRAMD1B-208ENST00000532581 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
GRAMD1B-208ENST00000532581 LCE2DQ5TA82 110 aaPredicted RBP4.57□□□□□ -1.68
GRAMD1B-208ENST00000532581 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
GRAMD1B-208ENST00000532581 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
GRAMD1B-208ENST00000532581 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
GRAMD1B-208ENST00000532581 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
GRAMD1B-208ENST00000532581 MT1LQ93083 61 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms