RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
PPFIA1-222ENST00000532504 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
PPFIA1-222ENST00000532504 DNAH17Q9UFH2 4485 aa7.42□□□□□ -1.22
PPFIA1-222ENST00000532504 KMT2AQ03164 3969 aa7.38□□□□□ -1.23
PPFIA1-222ENST00000532504 KIAA1109Q2LD37 5005 aa7.37□□□□□ -1.23
PPFIA1-222ENST00000532504 RYR3Q15413 4870 aa7.33□□□□□ -1.24
PPFIA1-222ENST00000532504 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
PPFIA1-222ENST00000532504 CMYA5Q8N3K9 4069 aa7.31□□□□□ -1.24
PPFIA1-222ENST00000532504 DNAH2Q9P225 4427 aa7.3□□□□□ -1.24
PPFIA1-222ENST00000532504 FAT2Q9NYQ8 4349 aa7.3□□□□□ -1.24
PPFIA1-222ENST00000532504 PP632Q6XCG6 107 aa7.28□□□□□ -1.24
PPFIA1-222ENST00000532504 DNAH3Q8TD57 4116 aa7.27□□□□□ -1.24
PPFIA1-222ENST00000532504 DYNC2H1Q8NCM8 4307 aaKnown RBP7.26□□□□□ -1.25
PPFIA1-222ENST00000532504 LYSTQ99698 3801 aa7.26□□□□□ -1.25
PPFIA1-222ENST00000532504 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
PPFIA1-222ENST00000532504 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
PPFIA1-222ENST00000532504 KRTAP17-1Q9BYP8 105 aa7.2□□□□□ -1.26
PPFIA1-222ENST00000532504 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
PPFIA1-222ENST00000532504 RYR2Q92736 4967 aa7.18□□□□□ -1.26
PPFIA1-222ENST00000532504 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
PPFIA1-222ENST00000532504 KRTAP3-3Q9BYR6 98 aa7.17□□□□□ -1.26
PPFIA1-222ENST00000532504 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.26
PPFIA1-222ENST00000532504 VPS13BQ7Z7G8 4022 aa7.14□□□□□ -1.27
PPFIA1-222ENST00000532504 DNAH8Q96JB1 4490 aa7.14□□□□□ -1.27
PPFIA1-222ENST00000532504 A0A0A0MQY5 61 aa7.09□□□□□ -1.27
PPFIA1-222ENST00000532504 APOBP04114 4563 aaKnown RBP7.06□□□□□ -1.28
PPFIA1-222ENST00000532504 BIRC6Q9NR09 4857 aa7.05□□□□□ -1.28
PPFIA1-222ENST00000532504 HYDINQ4G0P3 5121 aa7.04□□□□□ -1.28
PPFIA1-222ENST00000532504 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
PPFIA1-222ENST00000532504 HERC2O95714 4834 aa7.01□□□□□ -1.29
PPFIA1-222ENST00000532504 MT1HP80294 61 aa6.96□□□□□ -1.3
PPFIA1-222ENST00000532504 LRP1Q07954 4544 aaKnown RBP6.95□□□□□ -1.3
PPFIA1-222ENST00000532504 MYCBP2O75592 4640 aa6.95□□□□□ -1.3
PPFIA1-222ENST00000532504 DNAH7Q8WXX0 4024 aa6.95□□□□□ -1.3
PPFIA1-222ENST00000532504 DNAH6Q9C0G6 4158 aa6.94□□□□□ -1.3
PPFIA1-222ENST00000532504 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
PPFIA1-222ENST00000532504 KMT2CQ8NEZ4 4911 aaKnown RBP6.91□□□□□ -1.3
PPFIA1-222ENST00000532504 NDUFAF8A1L188 74 aa6.91□□□□□ -1.3
PPFIA1-222ENST00000532504 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
PPFIA1-222ENST00000532504 PKHD1P08F94 4074 aa6.81□□□□□ -1.32
PPFIA1-222ENST00000532504 HSPG2P98160 4391 aa6.81□□□□□ -1.32
PPFIA1-222ENST00000532504 HECTD4Q9Y4D8 3996 aa6.79□□□□□ -1.32
PPFIA1-222ENST00000532504 KRTAP10-12P60413 245 aa6.78□□□□□ -1.32
PPFIA1-222ENST00000532504 MT2AP02795 61 aa6.76□□□□□ -1.33
PPFIA1-222ENST00000532504 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
PPFIA1-222ENST00000532504 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
PPFIA1-222ENST00000532504 H3BS24 57 aa6.71□□□□□ -1.34
PPFIA1-222ENST00000532504 EPPK1P58107 5090 aaKnown RBP6.69□□□□□ -1.34
PPFIA1-222ENST00000532504 MT1FP04733 61 aa6.66□□□□□ -1.34
PPFIA1-222ENST00000532504 PCLOQ9Y6V0 5065 aa6.64□□□□□ -1.35
PPFIA1-222ENST00000532504 LRP2P98164 4655 aa6.6□□□□□ -1.35
PPFIA1-222ENST00000532504 CRCT1Q9UGL9 99 aa6.59□□□□□ -1.35
PPFIA1-222ENST00000532504 PKD1P98161 4303 aa6.56□□□□□ -1.36
PPFIA1-222ENST00000532504 HERC1Q15751 4861 aa6.56□□□□□ -1.36
PPFIA1-222ENST00000532504 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
PPFIA1-222ENST00000532504 ABCA13Q86UQ4 5058 aa6.52□□□□□ -1.37
PPFIA1-222ENST00000532504 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
PPFIA1-222ENST00000532504 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
PPFIA1-222ENST00000532504 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
PPFIA1-222ENST00000532504 LPAP08519 4548 aa6.42□□□□□ -1.38
PPFIA1-222ENST00000532504 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
PPFIA1-222ENST00000532504 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
PPFIA1-222ENST00000532504 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
PPFIA1-222ENST00000532504 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
PPFIA1-222ENST00000532504 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
PPFIA1-222ENST00000532504 TNXBP22105 4242 aa6.21□□□□□ -1.42
PPFIA1-222ENST00000532504 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
PPFIA1-222ENST00000532504 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
PPFIA1-222ENST00000532504 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
PPFIA1-222ENST00000532504 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
PPFIA1-222ENST00000532504 KRTAP19-2Q3LHN2 52 aa6.07□□□□□ -1.44
PPFIA1-222ENST00000532504 KRTAP19-5Q3LI72 72 aa6.04□□□□□ -1.44
PPFIA1-222ENST00000532504 RNF213Q63HN8 5207 aa6.04□□□□□ -1.44
PPFIA1-222ENST00000532504 MT1BP07438 61 aa6.04□□□□□ -1.44
PPFIA1-222ENST00000532504 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
PPFIA1-222ENST00000532504 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
PPFIA1-222ENST00000532504 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
PPFIA1-222ENST00000532504 FAT4Q6V0I7 4981 aa5.98□□□□□ -1.45
PPFIA1-222ENST00000532504 MT1XP80297 61 aa5.96□□□□□ -1.46
PPFIA1-222ENST00000532504 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
PPFIA1-222ENST00000532504 LCE2BO14633 110 aa5.92□□□□□ -1.46
PPFIA1-222ENST00000532504 SPRR2EP22531 72 aa5.91□□□□□ -1.46
PPFIA1-222ENST00000532504 SPRR2BP35325 72 aa5.91□□□□□ -1.46
PPFIA1-222ENST00000532504 SPRR2AP35326 72 aa5.91□□□□□ -1.46
PPFIA1-222ENST00000532504 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
PPFIA1-222ENST00000532504 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
PPFIA1-222ENST00000532504 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
PPFIA1-222ENST00000532504 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
PPFIA1-222ENST00000532504 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
PPFIA1-222ENST00000532504 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
PPFIA1-222ENST00000532504 MUC2Q02817 5179 aa5.72□□□□□ -1.49
PPFIA1-222ENST00000532504 SPRR2DP22532 72 aa5.71□□□□□ -1.5
PPFIA1-222ENST00000532504 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
PPFIA1-222ENST00000532504 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
PPFIA1-222ENST00000532504 KRTAP9-6A0A140TA67 174 aa5.6□□□□□ -1.51
PPFIA1-222ENST00000532504 KRTAP19-6Q3LI70 58 aa5.57□□□□□ -1.52
PPFIA1-222ENST00000532504 MT1GP13640 62 aa5.51□□□□□ -1.53
PPFIA1-222ENST00000532504 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
PPFIA1-222ENST00000532504 INE1O15225 51 aa5.44□□□□□ -1.54
PPFIA1-222ENST00000532504 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms