RNA–Protein interactions for RNA: ENST00000532280.1

PTENP1-202, Transcript of phosphatase and tensin homolog pseudogene 1, humanhuman

BASIC

Gene PTENP1, Length 3,996 nt, Biotype processed transcript, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTENP1-202ENST00000532280 VPS13BQ7Z7G8 4022 aa7.59□□□□□ -1.2
PTENP1-202ENST00000532280 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
PTENP1-202ENST00000532280 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
PTENP1-202ENST00000532280 KRTAP13-4Q3LI77 160 aa7.49□□□□□ -1.21
PTENP1-202ENST00000532280 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
PTENP1-202ENST00000532280 PKHD1P08F94 4074 aa7.48□□□□□ -1.21
PTENP1-202ENST00000532280 KRTAP12-2P59991 146 aa7.47□□□□□ -1.21
PTENP1-202ENST00000532280 DYNC1H1Q14204 4646 aaKnown RBP7.46□□□□□ -1.22
PTENP1-202ENST00000532280 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
PTENP1-202ENST00000532280 Q5VSD8 79 aa7.41□□□□□ -1.22
PTENP1-202ENST00000532280 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.23
PTENP1-202ENST00000532280 MYCBP2O75592 4640 aa7.37□□□□□ -1.23
PTENP1-202ENST00000532280 PKD1P98161 4303 aa7.35□□□□□ -1.23
PTENP1-202ENST00000532280 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
PTENP1-202ENST00000532280 A0A1B0GVY2 172 aa7.31□□□□□ -1.24
PTENP1-202ENST00000532280 KRTAP10-6P60371 365 aaPredicted RBP7.3□□□□□ -1.24
PTENP1-202ENST00000532280 LRP1Q07954 4544 aaKnown RBP7.29□□□□□ -1.24
PTENP1-202ENST00000532280 SACSQ9NZJ4 4579 aa7.28□□□□□ -1.24
PTENP1-202ENST00000532280 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
PTENP1-202ENST00000532280 KRTAP10-4P60372 401 aaPredicted RBP7.25□□□□□ -1.25
PTENP1-202ENST00000532280 XP32Q5T750 250 aa7.22□□□□□ -1.25
PTENP1-202ENST00000532280 APOBP04114 4563 aaKnown RBP7.22□□□□□ -1.25
PTENP1-202ENST00000532280 KRTAP21-3Q3LHN1 58 aa7.16□□□□□ -1.26
PTENP1-202ENST00000532280 KMT2CQ8NEZ4 4911 aaKnown RBP7.13□□□□□ -1.27
PTENP1-202ENST00000532280 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
PTENP1-202ENST00000532280 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
PTENP1-202ENST00000532280 KIAA1109Q2LD37 5005 aa7.07□□□□□ -1.28
PTENP1-202ENST00000532280 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
PTENP1-202ENST00000532280 RYR2Q92736 4967 aa7.01□□□□□ -1.29
PTENP1-202ENST00000532280 HSPG2P98160 4391 aa6.99□□□□□ -1.29
PTENP1-202ENST00000532280 RYR1P21817 5038 aa6.99□□□□□ -1.29
PTENP1-202ENST00000532280 TNP1P09430 55 aa6.97□□□□□ -1.29
PTENP1-202ENST00000532280 KRTAP17-1Q9BYP8 105 aa6.96□□□□□ -1.29
PTENP1-202ENST00000532280 RYR3Q15413 4870 aa6.96□□□□□ -1.3
PTENP1-202ENST00000532280 M0R2T5 61 aa6.95□□□□□ -1.3
PTENP1-202ENST00000532280 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
PTENP1-202ENST00000532280 LRP2P98164 4655 aa6.91□□□□□ -1.3
PTENP1-202ENST00000532280 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
PTENP1-202ENST00000532280 PP632Q6XCG6 107 aa6.9□□□□□ -1.3
PTENP1-202ENST00000532280 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
PTENP1-202ENST00000532280 LPAP08519 4548 aa6.8□□□□□ -1.32
PTENP1-202ENST00000532280 TNXBP22105 4242 aa6.76□□□□□ -1.33
PTENP1-202ENST00000532280 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
PTENP1-202ENST00000532280 EPPK1P58107 5090 aaKnown RBP6.65□□□□□ -1.34
PTENP1-202ENST00000532280 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
PTENP1-202ENST00000532280 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
PTENP1-202ENST00000532280 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
PTENP1-202ENST00000532280 MUC2Q02817 5179 aa6.45□□□□□ -1.38
PTENP1-202ENST00000532280 HERC2O95714 4834 aa6.43□□□□□ -1.38
PTENP1-202ENST00000532280 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
PTENP1-202ENST00000532280 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
PTENP1-202ENST00000532280 FAT4Q6V0I7 4981 aa6.17□□□□□ -1.42
PTENP1-202ENST00000532280 HERC1Q15751 4861 aa6.17□□□□□ -1.42
PTENP1-202ENST00000532280 INE1O15225 51 aa6.16□□□□□ -1.42
PTENP1-202ENST00000532280 MUC17Q685J3 4493 aa6.16□□□□□ -1.42
PTENP1-202ENST00000532280 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
PTENP1-202ENST00000532280 RNF213Q63HN8 5207 aa6.08□□□□□ -1.44
PTENP1-202ENST00000532280 KRTAP19-2Q3LHN2 52 aa6.05□□□□□ -1.44
PTENP1-202ENST00000532280 PCLOQ9Y6V0 5065 aa5.99□□□□□ -1.45
PTENP1-202ENST00000532280 BIRC6Q9NR09 4857 aa5.95□□□□□ -1.46
PTENP1-202ENST00000532280 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
PTENP1-202ENST00000532280 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
PTENP1-202ENST00000532280 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
PTENP1-202ENST00000532280 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
PTENP1-202ENST00000532280 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
PTENP1-202ENST00000532280 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
PTENP1-202ENST00000532280 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
PTENP1-202ENST00000532280 MT1HP80294 61 aa5.81□□□□□ -1.48
PTENP1-202ENST00000532280 MT1FP04733 61 aa5.8□□□□□ -1.48
PTENP1-202ENST00000532280 MT2AP02795 61 aa5.76□□□□□ -1.49
PTENP1-202ENST00000532280 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
PTENP1-202ENST00000532280 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
PTENP1-202ENST00000532280 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
PTENP1-202ENST00000532280 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
PTENP1-202ENST00000532280 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
PTENP1-202ENST00000532280 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
PTENP1-202ENST00000532280 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
PTENP1-202ENST00000532280 MT1BP07438 61 aa5.5□□□□□ -1.53
PTENP1-202ENST00000532280 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
PTENP1-202ENST00000532280 MT1XP80297 61 aa5.49□□□□□ -1.53
PTENP1-202ENST00000532280 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
PTENP1-202ENST00000532280 USH2AO75445 5202 aa5.48□□□□□ -1.53
PTENP1-202ENST00000532280 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
PTENP1-202ENST00000532280 KMT2DO14686 5537 aa5.4□□□□□ -1.55
PTENP1-202ENST00000532280 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.55
PTENP1-202ENST00000532280 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
PTENP1-202ENST00000532280 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
PTENP1-202ENST00000532280 KRTAP9-3Q9BYQ3 159 aa5.33□□□□□ -1.56
PTENP1-202ENST00000532280 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
PTENP1-202ENST00000532280 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
PTENP1-202ENST00000532280 LCE2BO14633 110 aa5.23□□□□□ -1.57
PTENP1-202ENST00000532280 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
PTENP1-202ENST00000532280 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
PTENP1-202ENST00000532280 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
PTENP1-202ENST00000532280 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
PTENP1-202ENST00000532280 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
PTENP1-202ENST00000532280 MT1GP13640 62 aa4.89□□□□□ -1.63
PTENP1-202ENST00000532280 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
PTENP1-202ENST00000532280 LCE2AQ5TA79 106 aaPredicted RBP4.86□□□□□ -1.63
PTENP1-202ENST00000532280 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms