RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 SPRR2GQ9BYE4 73 aa10.29□□□□□ -0.76
PPP1CA-207ENST00000532279 Q5VV11 94 aa10.27□□□□□ -0.77
PPP1CA-207ENST00000532279 MT1BP07438 61 aa10.26□□□□□ -0.77
PPP1CA-207ENST00000532279 SYNE2Q8WXH0 6885 aaKnown RBP10.22□□□□□ -0.77
PPP1CA-207ENST00000532279 KRTAP19-8Q3LI54 63 aa10.22□□□□□ -0.77
PPP1CA-207ENST00000532279 LINC00208Q96KT6 92 aa10.22□□□□□ -0.77
PPP1CA-207ENST00000532279 NDUFC1O43677 76 aa10.18□□□□□ -0.78
PPP1CA-207ENST00000532279 A6NN06 94 aa10.17□□□□□ -0.78
PPP1CA-207ENST00000532279 OCR1Q9BZK8 76 aa10.16□□□□□ -0.78
PPP1CA-207ENST00000532279 IMUPQ9GZP8 106 aa10.16□□□□□ -0.78
PPP1CA-207ENST00000532279 MP68P56378 58 aa10.15□□□□□ -0.78
PPP1CA-207ENST00000532279 A8MUN3 132 aa10.12□□□□□ -0.79
PPP1CA-207ENST00000532279 CRIPTQ9P021 101 aa10.11□□□□□ -0.79
PPP1CA-207ENST00000532279 J3QR89 54 aa10.08□□□□□ -0.8
PPP1CA-207ENST00000532279 KRTAP6-3Q3LI67 103 aa10.07□□□□□ -0.8
PPP1CA-207ENST00000532279 H0YAA0 97 aa10.05□□□□□ -0.8
PPP1CA-207ENST00000532279 KRTAP10-5P60370 271 aa10.02□□□□□ -0.81
PPP1CA-207ENST00000532279 ADM2Q7Z4H4 148 aa10.01□□□□□ -0.81
PPP1CA-207ENST00000532279 SCGB1A1P11684 91 aa9.98□□□□□ -0.81
PPP1CA-207ENST00000532279 H3BPC8 53 aa9.96□□□□□ -0.82
PPP1CA-207ENST00000532279 DMAC1Q96GE9 116 aa9.86□□□□□ -0.83
PPP1CA-207ENST00000532279 MT-ATP8P03928 68 aa9.77□□□□□ -0.85
PPP1CA-207ENST00000532279 P0C880 135 aa9.77□□□□□ -0.85
PPP1CA-207ENST00000532279 R4GN34 69 aa9.74□□□□□ -0.85
PPP1CA-207ENST00000532279 C20orf197Q8N268 126 aa9.73□□□□□ -0.85
PPP1CA-207ENST00000532279 K7ERU9 68 aa9.69□□□□□ -0.86
PPP1CA-207ENST00000532279 PLAC4Q8WY50 150 aa9.69□□□□□ -0.86
PPP1CA-207ENST00000532279 M0QZ58 72 aa9.68□□□□□ -0.86
PPP1CA-207ENST00000532279 TRAV7A0A075B6U4 112 aa9.66□□□□□ -0.86
PPP1CA-207ENST00000532279 SMIM20Q8N5G0 67 aa9.65□□□□□ -0.86
PPP1CA-207ENST00000532279 KRTAP3-2Q9BYR7 98 aa9.65□□□□□ -0.86
PPP1CA-207ENST00000532279 PRO2289Q9P1D8 64 aa9.65□□□□□ -0.86
PPP1CA-207ENST00000532279 ACYP2P14621 99 aa9.63□□□□□ -0.87
PPP1CA-207ENST00000532279 MT1XP80297 61 aa9.62□□□□□ -0.87
PPP1CA-207ENST00000532279 KRTAP5-9P26371 169 aa9.6□□□□□ -0.87
PPP1CA-207ENST00000532279 NEBP20929 6669 aa9.57□□□□□ -0.88
PPP1CA-207ENST00000532279 LINC01554Q52M75 96 aa9.57□□□□□ -0.88
PPP1CA-207ENST00000532279 MUC12Q9UKN1 5478 aa9.56□□□□□ -0.88
PPP1CA-207ENST00000532279 SPTSSBQ8NFR3 76 aa9.52□□□□□ -0.89
PPP1CA-207ENST00000532279 SNURFQ9Y675 71 aa9.52□□□□□ -0.89
PPP1CA-207ENST00000532279 CHKB-CPT1BH3BT56 60 aa9.48□□□□□ -0.89
PPP1CA-207ENST00000532279 KMT2DO14686 5537 aa9.4□□□□□ -0.9
PPP1CA-207ENST00000532279 SPRR2FQ96RM1 72 aa9.38□□□□□ -0.91
PPP1CA-207ENST00000532279 KRTAP20-1Q3LI63 56 aa9.36□□□□□ -0.91
PPP1CA-207ENST00000532279 KRTAP12-2P59991 146 aa9.35□□□□□ -0.91
PPP1CA-207ENST00000532279 KRTAP8-1Q8IUC2 63 aa9.34□□□□□ -0.91
PPP1CA-207ENST00000532279 SERP2Q8N6R1 65 aa9.33□□□□□ -0.92
PPP1CA-207ENST00000532279 SPANXA2-OT1Q8N9U9 137 aa9.33□□□□□ -0.92
PPP1CA-207ENST00000532279 MDN1Q9NU22 5596 aa9.27□□□□□ -0.93
PPP1CA-207ENST00000532279 SPRR2EP22531 72 aa9.24□□□□□ -0.93
PPP1CA-207ENST00000532279 SPRR2BP35325 72 aa9.24□□□□□ -0.93
PPP1CA-207ENST00000532279 SPRR2AP35326 72 aa9.24□□□□□ -0.93
PPP1CA-207ENST00000532279 KRTAP4-8A0A0G2JLE6 195 aa9.23□□□□□ -0.93
PPP1CA-207ENST00000532279 KRTAP4-8Q9BYQ9 185 aa9.23□□□□□ -0.93
PPP1CA-207ENST00000532279 KRTAP10-7P60409 375 aaPredicted RBP9.2□□□□□ -0.94
PPP1CA-207ENST00000532279 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
PPP1CA-207ENST00000532279 KRTAP10-12P60413 245 aa9.12□□□□□ -0.95
PPP1CA-207ENST00000532279 COA5Q86WW8 74 aa9.12□□□□□ -0.95
PPP1CA-207ENST00000532279 KRTAP2-3P0C7H8 128 aa9.09□□□□□ -0.95
PPP1CA-207ENST00000532279 KRTAP2-4Q9BYR9 128 aa9.09□□□□□ -0.95
PPP1CA-207ENST00000532279 LCE1AQ5T7P2 110 aa9.08□□□□□ -0.96
PPP1CA-207ENST00000532279 COX7CP15954 63 aa9.04□□□□□ -0.96
PPP1CA-207ENST00000532279 CAMK2N1Q7Z7J9 78 aa8.98□□□□□ -0.97
PPP1CA-207ENST00000532279 SEC61GP60059 68 aa8.97□□□□□ -0.97
PPP1CA-207ENST00000532279 CYSTM1Q9H1C7 97 aa8.95□□□□□ -0.98
PPP1CA-207ENST00000532279 SERP1Q9Y6X1 66 aa8.95□□□□□ -0.98
PPP1CA-207ENST00000532279 SPRR2DP22532 72 aa8.93□□□□□ -0.98
PPP1CA-207ENST00000532279 H7BZZ5 65 aa8.92□□□□□ -0.98
PPP1CA-207ENST00000532279 A0A0D9SG42 100 aa8.89□□□□□ -0.99
PPP1CA-207ENST00000532279 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
PPP1CA-207ENST00000532279 A0A1B0GU33 70 aa8.81□□□□□ -1
PPP1CA-207ENST00000532279 KRTAP2-2Q9BYT5 123 aa8.81□□□□□ -1
PPP1CA-207ENST00000532279 KRTAP2-1Q9BYU5 128 aa8.81□□□□□ -1
PPP1CA-207ENST00000532279 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
PPP1CA-207ENST00000532279 ANAPC13Q9BS18 74 aa8.73□□□□□ -1.01
PPP1CA-207ENST00000532279 LCE3BQ5TA77 95 aa8.68□□□□□ -1.02
PPP1CA-207ENST00000532279 A0A1B0GU69 56 aa8.66□□□□□ -1.02
PPP1CA-207ENST00000532279 KRTAP12-1P59990 96 aa8.66□□□□□ -1.02
PPP1CA-207ENST00000532279 KRTAP19-7Q3SYF9 63 aa8.59□□□□□ -1.03
PPP1CA-207ENST00000532279 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
PPP1CA-207ENST00000532279 SMIM26A0A096LP01 95 aa8.55□□□□□ -1.04
PPP1CA-207ENST00000532279 A8MU10 97 aa8.52□□□□□ -1.05
PPP1CA-207ENST00000532279 MT1EP04732 61 aa8.52□□□□□ -1.05
PPP1CA-207ENST00000532279 LCE5AQ5TCM9 118 aa8.46□□□□□ -1.06
PPP1CA-207ENST00000532279 KRTAP19-3Q7Z4W3 81 aa8.45□□□□□ -1.06
PPP1CA-207ENST00000532279 ATP5EP56381 51 aaPredicted RBP8.43□□□□□ -1.06
PPP1CA-207ENST00000532279 KRTAP19-5Q3LI72 72 aa8.41□□□□□ -1.06
PPP1CA-207ENST00000532279 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
PPP1CA-207ENST00000532279 C10orf95Q9H7T3 257 aa8.29□□□□□ -1.08
PPP1CA-207ENST00000532279 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
PPP1CA-207ENST00000532279 TNP1P09430 55 aa8.25□□□□□ -1.09
PPP1CA-207ENST00000532279 DSTQ03001 7570 aaKnown RBP8.24□□□□□ -1.09
PPP1CA-207ENST00000532279 MT1GP13640 62 aa8.23□□□□□ -1.09
PPP1CA-207ENST00000532279 LCE3AQ5TA76 89 aa8.22□□□□□ -1.09
PPP1CA-207ENST00000532279 TMEM258P61165 79 aa8.21□□□□□ -1.1
PPP1CA-207ENST00000532279 PP632Q6XCG6 107 aa8.18□□□□□ -1.1
PPP1CA-207ENST00000532279 MT1LQ93083 61 aa8.15□□□□□ -1.1
PPP1CA-207ENST00000532279 MT1MQ8N339 61 aa8.12□□□□□ -1.11
PPP1CA-207ENST00000532279 UQCR11O14957 56 aa8.1□□□□□ -1.11
PPP1CA-207ENST00000532279 KRTAP4-9Q9BYQ8 210 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms