RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 DSCR8Q96T75 97 aa3.11□□□□□ -1.91
HMGB1P42-201ENST00000532126 RPL37P61927 97 aaKnown RBP3.1□□□□□ -1.91
HMGB1P42-201ENST00000532126 PCOTHQ58A44 107 aa3.1□□□□□ -1.91
HMGB1P42-201ENST00000532126 LINC00643Q86TS7 51 aa3.1□□□□□ -1.91
HMGB1P42-201ENST00000532126 OBSCN-AS1Q96MR7 158 aa3.1□□□□□ -1.91
HMGB1P42-201ENST00000532126 JMJD7-PLA2G4BH0Y9G9 81 aa3.09□□□□□ -1.91
HMGB1P42-201ENST00000532126 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
HMGB1P42-201ENST00000532126 IGKV4-1P06312 121 aa3.08□□□□□ -1.92
HMGB1P42-201ENST00000532126 Q96NJ1 140 aa3.08□□□□□ -1.92
HMGB1P42-201ENST00000532126 PDE6GP18545 87 aa3.07□□□□□ -1.92
HMGB1P42-201ENST00000532126 DSCR10P59022 87 aa3.07□□□□□ -1.92
HMGB1P42-201ENST00000532126 KRTAP9-8Q9BYQ0 159 aa3.07□□□□□ -1.92
HMGB1P42-201ENST00000532126 LOC110117498A0A087WWA1 95 aa3.06□□□□□ -1.92
HMGB1P42-201ENST00000532126 ATP11AUNQ6ZP68 121 aa3.06□□□□□ -1.92
HMGB1P42-201ENST00000532126 Q6ZQT0 140 aa3.06□□□□□ -1.92
HMGB1P42-201ENST00000532126 LINC00472Q9H8W2 130 aa3.06□□□□□ -1.92
HMGB1P42-201ENST00000532126 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
HMGB1P42-201ENST00000532126 C14orf132Q9NPU4 83 aa3.05□□□□□ -1.92
HMGB1P42-201ENST00000532126 NDUFC1O43677 76 aa3.04□□□□□ -1.92
HMGB1P42-201ENST00000532126 C20orf166-AS1Q96NR2 134 aa3.04□□□□□ -1.92
HMGB1P42-201ENST00000532126 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
HMGB1P42-201ENST00000532126 Q8N9L7 120 aa3.03□□□□□ -1.92
HMGB1P42-201ENST00000532126 NDUFB1O75438 58 aa3.01□□□□□ -1.93
HMGB1P42-201ENST00000532126 NREPQ16612 68 aa3.01□□□□□ -1.93
HMGB1P42-201ENST00000532126 CYSTM1Q9H1C7 97 aa3.01□□□□□ -1.93
HMGB1P42-201ENST00000532126 hDV103S1A0JD37 113 aa3□□□□□ -1.93
HMGB1P42-201ENST00000532126 KLKP1Q107X0 134 aa3□□□□□ -1.93
HMGB1P42-201ENST00000532126 KRTAP19-2Q3LHN2 52 aa3□□□□□ -1.93
HMGB1P42-201ENST00000532126 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
HMGB1P42-201ENST00000532126 R4GN34 69 aa2.99□□□□□ -1.93
HMGB1P42-201ENST00000532126 IGKV3D-7A0A0C4DH55 119 aa2.98□□□□□ -1.93
HMGB1P42-201ENST00000532126 H7BZZ5 65 aa2.98□□□□□ -1.93
HMGB1P42-201ENST00000532126 ATP5EP2Q5VTU8 51 aa2.98□□□□□ -1.93
HMGB1P42-201ENST00000532126 MT1HP80294 61 aa2.97□□□□□ -1.93
HMGB1P42-201ENST00000532126 ROMO1P60602 79 aa2.96□□□□□ -1.94
HMGB1P42-201ENST00000532126 Q1T7F1 81 aa2.96□□□□□ -1.94
HMGB1P42-201ENST00000532126 K7EQZ3 153 aa2.95□□□□□ -1.94
HMGB1P42-201ENST00000532126 M0R2T5 61 aa2.95□□□□□ -1.94
HMGB1P42-201ENST00000532126 TMEM254Q8TBM7 123 aa2.95□□□□□ -1.94
HMGB1P42-201ENST00000532126 ZCCHC13Q8WW36 166 aaKnown RBP2.95□□□□□ -1.94
HMGB1P42-201ENST00000532126 MMP24-AS1A0A0U1RRL7 71 aa2.94□□□□□ -1.94
HMGB1P42-201ENST00000532126 UBL5Q9BZL1 73 aa2.94□□□□□ -1.94
HMGB1P42-201ENST00000532126 C20orf197Q8N268 126 aa2.93□□□□□ -1.94
HMGB1P42-201ENST00000532126 MRPL34Q9BQ48 92 aaKnown RBP2.93□□□□□ -1.94
HMGB1P42-201ENST00000532126 LINC00846Q9NV44 126 aa2.93□□□□□ -1.94
HMGB1P42-201ENST00000532126 SPINK7P58062 85 aa2.92□□□□□ -1.94
HMGB1P42-201ENST00000532126 HRES1P13985 223 aa2.91□□□□□ -1.94
HMGB1P42-201ENST00000532126 CASC2Q6XLA1 102 aa2.91□□□□□ -1.94
HMGB1P42-201ENST00000532126 A6NN06 94 aa2.9□□□□□ -1.95
HMGB1P42-201ENST00000532126 KRTAP10-6P60371 365 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P42-201ENST00000532126 WFDC13Q8IUB5 93 aa2.9□□□□□ -1.95
HMGB1P42-201ENST00000532126 FSIP2Q5CZC0 6907 aa2.89□□□□□ -1.95
HMGB1P42-201ENST00000532126 HCG22E2RYF7 251 aa2.88□□□□□ -1.95
HMGB1P42-201ENST00000532126 CYP4F30PQ9H0H9 118 aa2.88□□□□□ -1.95
HMGB1P42-201ENST00000532126 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
HMGB1P42-201ENST00000532126 FLGP20930 4061 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P42-201ENST00000532126 A0A087WVE0 104 aa2.84□□□□□ -1.95
HMGB1P42-201ENST00000532126 A8MU10 97 aa2.84□□□□□ -1.95
HMGB1P42-201ENST00000532126 TRAV22A0A0B4J277 110 aa2.83□□□□□ -1.96
HMGB1P42-201ENST00000532126 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
HMGB1P42-201ENST00000532126 TP53AIP1Q9HCN2 124 aa2.82□□□□□ -1.96
HMGB1P42-201ENST00000532126 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
HMGB1P42-201ENST00000532126 MIR22HGQ0VDD5 57 aa2.81□□□□□ -1.96
HMGB1P42-201ENST00000532126 Q5VV11 94 aa2.81□□□□□ -1.96
HMGB1P42-201ENST00000532126 H1FX-AS1Q4G0G2 97 aa2.8□□□□□ -1.96
HMGB1P42-201ENST00000532126 SNURFQ9Y675 71 aa2.8□□□□□ -1.96
HMGB1P42-201ENST00000532126 SPTSSBQ8NFR3 76 aa2.79□□□□□ -1.96
HMGB1P42-201ENST00000532126 LOC101927531A0A1B0GV80 90 aa2.78□□□□□ -1.96
HMGB1P42-201ENST00000532126 CHKB-CPT1BH3BT56 60 aa2.78□□□□□ -1.96
HMGB1P42-201ENST00000532126 MT2AP02795 61 aa2.78□□□□□ -1.96
HMGB1P42-201ENST00000532126 KRTAP10-10P60014 251 aa2.77□□□□□ -1.97
HMGB1P42-201ENST00000532126 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
HMGB1P42-201ENST00000532126 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
HMGB1P42-201ENST00000532126 MT1FP04733 61 aa2.76□□□□□ -1.97
HMGB1P42-201ENST00000532126 H0Y9P7 68 aa2.73□□□□□ -1.97
HMGB1P42-201ENST00000532126 USH2AO75445 5202 aa2.72□□□□□ -1.97
HMGB1P42-201ENST00000532126 P0C880 135 aa2.72□□□□□ -1.97
HMGB1P42-201ENST00000532126 S4R3F8 94 aa2.72□□□□□ -1.97
HMGB1P42-201ENST00000532126 PRR15LQ9BU68 103 aa2.71□□□□□ -1.98
HMGB1P42-201ENST00000532126 CSAG1Q6PB30 78 aa2.7□□□□□ -1.98
HMGB1P42-201ENST00000532126 LINC00208Q96KT6 92 aa2.7□□□□□ -1.98
HMGB1P42-201ENST00000532126 DMAC1Q96GE9 116 aa2.68□□□□□ -1.98
HMGB1P42-201ENST00000532126 SSPOA2VEC9 5147 aa2.67□□□□□ -1.98
HMGB1P42-201ENST00000532126 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
HMGB1P42-201ENST00000532126 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
HMGB1P42-201ENST00000532126 SYNE2Q8WXH0 6885 aaKnown RBP2.62□□□□□ -1.99
HMGB1P42-201ENST00000532126 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
HMGB1P42-201ENST00000532126 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P42-201ENST00000532126 H0YAA0 97 aa2.59□□□□□ -1.99
HMGB1P42-201ENST00000532126 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -1.99
HMGB1P42-201ENST00000532126 COA5Q86WW8 74 aa2.59□□□□□ -1.99
HMGB1P42-201ENST00000532126 SPRR2GQ9BYE4 73 aa2.59□□□□□ -1.99
HMGB1P42-201ENST00000532126 CRIPTQ9P021 101 aa2.59□□□□□ -1.99
HMGB1P42-201ENST00000532126 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
HMGB1P42-201ENST00000532126 SPATA8Q6RVD6 105 aa2.56□□□□□ -2
HMGB1P42-201ENST00000532126 INE1O15225 51 aa2.55□□□□□ -2
HMGB1P42-201ENST00000532126 ACYP2P14621 99 aa2.55□□□□□ -2
HMGB1P42-201ENST00000532126 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
HMGB1P42-201ENST00000532126 UQCR11O14957 56 aa2.54□□□□□ -2
HMGB1P42-201ENST00000532126 MT1BP07438 61 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms