RNA–Protein interactions for RNA: ENST00000531696.5

KDM2A-213, Transcript of lysine demethylase 2A, humanhuman

TSL 5

Gene KDM2A, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-213ENST00000531696 ALMS1Q8TCU4 4167 aa5.36□□□□□ -1.55
KDM2A-213ENST00000531696 DYNC2H1Q8NCM8 4307 aaKnown RBP5.35□□□□□ -1.55
KDM2A-213ENST00000531696 HUWE1Q7Z6Z7 4374 aaKnown RBP5.35□□□□□ -1.55
KDM2A-213ENST00000531696 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
KDM2A-213ENST00000531696 KRTAP3-3Q9BYR6 98 aa5.34□□□□□ -1.55
KDM2A-213ENST00000531696 HECTD4Q9Y4D8 3996 aa5.29□□□□□ -1.56
KDM2A-213ENST00000531696 DNAH8Q96JB1 4490 aa5.29□□□□□ -1.56
KDM2A-213ENST00000531696 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
KDM2A-213ENST00000531696 DNAH17Q9UFH2 4485 aa5.24□□□□□ -1.57
KDM2A-213ENST00000531696 KMT2AQ03164 3969 aa5.24□□□□□ -1.57
KDM2A-213ENST00000531696 FAT2Q9NYQ8 4349 aa5.21□□□□□ -1.57
KDM2A-213ENST00000531696 STARD9Q9P2P6 4700 aa5.2□□□□□ -1.58
KDM2A-213ENST00000531696 DNAH2Q9P225 4427 aa5.19□□□□□ -1.58
KDM2A-213ENST00000531696 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
KDM2A-213ENST00000531696 Q5VSD8 79 aa5.14□□□□□ -1.59
KDM2A-213ENST00000531696 PKD1P98161 4303 aa5.14□□□□□ -1.59
KDM2A-213ENST00000531696 INE1O15225 51 aa5.14□□□□□ -1.59
KDM2A-213ENST00000531696 EPPK1P58107 5090 aaKnown RBP5.14□□□□□ -1.59
KDM2A-213ENST00000531696 VPS13DQ5THJ4 4388 aa5.13□□□□□ -1.59
KDM2A-213ENST00000531696 PKHD1P08F94 4074 aa5.12□□□□□ -1.59
KDM2A-213ENST00000531696 DNAH6Q9C0G6 4158 aa5.12□□□□□ -1.59
KDM2A-213ENST00000531696 RYR2Q92736 4967 aa5.1□□□□□ -1.59
KDM2A-213ENST00000531696 M0R2T5 61 aa5.09□□□□□ -1.59
KDM2A-213ENST00000531696 DNAH11Q96DT5 4516 aa5.08□□□□□ -1.6
KDM2A-213ENST00000531696 A0A1B0GVY2 172 aa5.05□□□□□ -1.6
KDM2A-213ENST00000531696 LRP1BQ9NZR2 4599 aa5.04□□□□□ -1.6
KDM2A-213ENST00000531696 KRTAP21-3Q3LHN1 58 aa5.01□□□□□ -1.61
KDM2A-213ENST00000531696 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
KDM2A-213ENST00000531696 PCLOQ9Y6V0 5065 aa4.95□□□□□ -1.62
KDM2A-213ENST00000531696 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
KDM2A-213ENST00000531696 DNAH5Q8TE73 4624 aa4.92□□□□□ -1.62
KDM2A-213ENST00000531696 FAT3Q8TDW7 4589 aa4.87□□□□□ -1.63
KDM2A-213ENST00000531696 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
KDM2A-213ENST00000531696 PKHD1L1Q86WI1 4243 aa4.8□□□□□ -1.64
KDM2A-213ENST00000531696 FAT1Q14517 4588 aa4.8□□□□□ -1.64
KDM2A-213ENST00000531696 MYCBP2O75592 4640 aa4.77□□□□□ -1.65
KDM2A-213ENST00000531696 HSPG2P98160 4391 aa4.77□□□□□ -1.65
KDM2A-213ENST00000531696 ABCA13Q86UQ4 5058 aa4.74□□□□□ -1.65
KDM2A-213ENST00000531696 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
KDM2A-213ENST00000531696 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
KDM2A-213ENST00000531696 RYR1P21817 5038 aa4.67□□□□□ -1.66
KDM2A-213ENST00000531696 DYNC1H1Q14204 4646 aaKnown RBP4.66□□□□□ -1.66
KDM2A-213ENST00000531696 LRP1Q07954 4544 aaKnown RBP4.62□□□□□ -1.67
KDM2A-213ENST00000531696 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
KDM2A-213ENST00000531696 HERC2O95714 4834 aa4.58□□□□□ -1.68
KDM2A-213ENST00000531696 HERC1Q15751 4861 aa4.57□□□□□ -1.68
KDM2A-213ENST00000531696 KRTAP10-4P60372 401 aaPredicted RBP4.57□□□□□ -1.68
KDM2A-213ENST00000531696 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
KDM2A-213ENST00000531696 LPAP08519 4548 aa4.55□□□□□ -1.68
KDM2A-213ENST00000531696 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
KDM2A-213ENST00000531696 KIAA1109Q2LD37 5005 aa4.54□□□□□ -1.68
KDM2A-213ENST00000531696 KRTAP4-5Q9BYR2 181 aa4.5□□□□□ -1.69
KDM2A-213ENST00000531696 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
KDM2A-213ENST00000531696 TNXBP22105 4242 aa4.47□□□□□ -1.69
KDM2A-213ENST00000531696 LRP2P98164 4655 aa4.44□□□□□ -1.7
KDM2A-213ENST00000531696 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
KDM2A-213ENST00000531696 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
KDM2A-213ENST00000531696 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
KDM2A-213ENST00000531696 MUC2Q02817 5179 aa4.32□□□□□ -1.72
KDM2A-213ENST00000531696 KRTAP4-1Q9BYQ7 146 aa4.28□□□□□ -1.72
KDM2A-213ENST00000531696 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
KDM2A-213ENST00000531696 HMCN2Q8NDA2 5059 aa4.25□□□□□ -1.73
KDM2A-213ENST00000531696 CRCT1Q9UGL9 99 aa4.25□□□□□ -1.73
KDM2A-213ENST00000531696 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
KDM2A-213ENST00000531696 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
KDM2A-213ENST00000531696 RNF213Q63HN8 5207 aa4.2□□□□□ -1.74
KDM2A-213ENST00000531696 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
KDM2A-213ENST00000531696 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
KDM2A-213ENST00000531696 SPRR2GQ9BYE4 73 aa4.04□□□□□ -1.76
KDM2A-213ENST00000531696 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
KDM2A-213ENST00000531696 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
KDM2A-213ENST00000531696 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
KDM2A-213ENST00000531696 FLGP20930 4061 aaPredicted RBP3.99□□□□□ -1.77
KDM2A-213ENST00000531696 MUC17Q685J3 4493 aa3.98□□□□□ -1.77
KDM2A-213ENST00000531696 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
KDM2A-213ENST00000531696 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
KDM2A-213ENST00000531696 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
KDM2A-213ENST00000531696 MT1FP04733 61 aa3.88□□□□□ -1.79
KDM2A-213ENST00000531696 MT2AP02795 61 aa3.86□□□□□ -1.79
KDM2A-213ENST00000531696 MT1XP80297 61 aa3.84□□□□□ -1.79
KDM2A-213ENST00000531696 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
KDM2A-213ENST00000531696 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
KDM2A-213ENST00000531696 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
KDM2A-213ENST00000531696 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
KDM2A-213ENST00000531696 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
KDM2A-213ENST00000531696 MT1HP80294 61 aa3.73□□□□□ -1.81
KDM2A-213ENST00000531696 MT1BP07438 61 aa3.7□□□□□ -1.82
KDM2A-213ENST00000531696 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
KDM2A-213ENST00000531696 KRTAP19-8Q3LI54 63 aa3.68□□□□□ -1.82
KDM2A-213ENST00000531696 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
KDM2A-213ENST00000531696 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
KDM2A-213ENST00000531696 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
KDM2A-213ENST00000531696 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
KDM2A-213ENST00000531696 MT1GP13640 62 aa3.63□□□□□ -1.83
KDM2A-213ENST00000531696 PRM1P04553 51 aa3.6□□□□□ -1.83
KDM2A-213ENST00000531696 LCE2CQ5TA81 110 aa3.58□□□□□ -1.84
KDM2A-213ENST00000531696 KMT2DO14686 5537 aa3.57□□□□□ -1.84
KDM2A-213ENST00000531696 USH2AO75445 5202 aa3.54□□□□□ -1.84
KDM2A-213ENST00000531696 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
KDM2A-213ENST00000531696 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms