RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 C9orf92A6NGG3 77 aa10.29□□□□□ -0.76
LTBP3-217ENST00000530785 CRIPTQ9P021 101 aa10.27□□□□□ -0.77
LTBP3-217ENST00000530785 K7ERS5 55 aa10.24□□□□□ -0.77
LTBP3-217ENST00000530785 KRTAP3-1Q9BYR8 98 aa10.24□□□□□ -0.77
LTBP3-217ENST00000530785 C20orf166-AS1Q96NR2 134 aa10.22□□□□□ -0.77
LTBP3-217ENST00000530785 Q5VSD8 79 aa10.22□□□□□ -0.77
LTBP3-217ENST00000530785 FLG2Q5D862 2391 aaPredicted RBP10.19□□□□□ -0.78
LTBP3-217ENST00000530785 LRP1Q07954 4544 aaKnown RBP10.16□□□□□ -0.78
LTBP3-217ENST00000530785 COX6B2Q6YFQ2 88 aa10.15□□□□□ -0.78
LTBP3-217ENST00000530785 BIRC6Q9NR09 4857 aa10.11□□□□□ -0.79
LTBP3-217ENST00000530785 NDUFAF8A1L188 74 aa10.1□□□□□ -0.79
LTBP3-217ENST00000530785 MYCBP2O75592 4640 aa10.1□□□□□ -0.79
LTBP3-217ENST00000530785 TNXBP22105 4242 aa10.07□□□□□ -0.8
LTBP3-217ENST00000530785 KRTAP10-8P60410 259 aa10.07□□□□□ -0.8
LTBP3-217ENST00000530785 KRTAP4-5Q9BYR2 181 aa10.07□□□□□ -0.8
LTBP3-217ENST00000530785 FAT3Q8TDW7 4589 aa10.02□□□□□ -0.81
LTBP3-217ENST00000530785 TPRXLQ17RH7 258 aa10.02□□□□□ -0.81
LTBP3-217ENST00000530785 SPINT4Q6UDR6 99 aa10.02□□□□□ -0.81
LTBP3-217ENST00000530785 RPL37P61927 97 aaKnown RBP9.99□□□□□ -0.81
LTBP3-217ENST00000530785 HERC2O95714 4834 aa9.97□□□□□ -0.81
LTBP3-217ENST00000530785 ABCA13Q86UQ4 5058 aa9.96□□□□□ -0.81
LTBP3-217ENST00000530785 KRTAP15-1Q3LI76 137 aa9.92□□□□□ -0.82
LTBP3-217ENST00000530785 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
LTBP3-217ENST00000530785 KRTAP10-6P60371 365 aaPredicted RBP9.9□□□□□ -0.83
LTBP3-217ENST00000530785 KRTAP13-4Q3LI77 160 aa9.88□□□□□ -0.83
LTBP3-217ENST00000530785 C10orf95Q9H7T3 257 aa9.83□□□□□ -0.84
LTBP3-217ENST00000530785 MT1HL1P0DM35 61 aa9.83□□□□□ -0.84
LTBP3-217ENST00000530785 XP32Q5T750 250 aa9.82□□□□□ -0.84
LTBP3-217ENST00000530785 A0A0D9SG42 100 aa9.8□□□□□ -0.84
LTBP3-217ENST00000530785 LUZP6Q538Z0 58 aa9.79□□□□□ -0.84
LTBP3-217ENST00000530785 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
LTBP3-217ENST00000530785 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
LTBP3-217ENST00000530785 PCLOQ9Y6V0 5065 aa9.75□□□□□ -0.85
LTBP3-217ENST00000530785 S4R3F8 94 aa9.67□□□□□ -0.86
LTBP3-217ENST00000530785 KRTAP12-2P59991 146 aa9.6□□□□□ -0.87
LTBP3-217ENST00000530785 J3QL48 77 aa9.58□□□□□ -0.88
LTBP3-217ENST00000530785 HERC1Q15751 4861 aa9.51□□□□□ -0.89
LTBP3-217ENST00000530785 KRTAP12-1P59990 96 aa9.51□□□□□ -0.89
LTBP3-217ENST00000530785 SEC61BP60468 96 aaKnown RBP9.51□□□□□ -0.89
LTBP3-217ENST00000530785 LRP2P98164 4655 aa9.47□□□□□ -0.89
LTBP3-217ENST00000530785 LPAP08519 4548 aa9.47□□□□□ -0.89
LTBP3-217ENST00000530785 M0QZ58 72 aa9.26□□□□□ -0.93
LTBP3-217ENST00000530785 HMCN2Q8NDA2 5059 aa9.24□□□□□ -0.93
LTBP3-217ENST00000530785 PLAC4Q8WY50 150 aa9.13□□□□□ -0.95
LTBP3-217ENST00000530785 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
LTBP3-217ENST00000530785 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
LTBP3-217ENST00000530785 MUC2Q02817 5179 aa9.03□□□□□ -0.96
LTBP3-217ENST00000530785 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
LTBP3-217ENST00000530785 KRTAP19-2Q3LHN2 52 aa8.9□□□□□ -0.99
LTBP3-217ENST00000530785 RNF213Q63HN8 5207 aa8.87□□□□□ -0.99
LTBP3-217ENST00000530785 R4GN34 69 aa8.86□□□□□ -0.99
LTBP3-217ENST00000530785 CAMK2N1Q7Z7J9 78 aa8.83□□□□□ -1
LTBP3-217ENST00000530785 PP632Q6XCG6 107 aa8.78□□□□□ -1
LTBP3-217ENST00000530785 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
LTBP3-217ENST00000530785 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
LTBP3-217ENST00000530785 FLGP20930 4061 aaPredicted RBP8.62□□□□□ -1.03
LTBP3-217ENST00000530785 PRO2289Q9P1D8 64 aa8.49□□□□□ -1.05
LTBP3-217ENST00000530785 SPRR5A0A1B0GTR4 108 aa8.48□□□□□ -1.05
LTBP3-217ENST00000530785 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
LTBP3-217ENST00000530785 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
LTBP3-217ENST00000530785 MT1HP80294 61 aa8.28□□□□□ -1.08
LTBP3-217ENST00000530785 TNP1P09430 55 aa8.27□□□□□ -1.09
LTBP3-217ENST00000530785 M0R2T5 61 aa8.22□□□□□ -1.09
LTBP3-217ENST00000530785 SPRR2GQ9BYE4 73 aa8.13□□□□□ -1.11
LTBP3-217ENST00000530785 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
LTBP3-217ENST00000530785 INE1O15225 51 aa8.1□□□□□ -1.11
LTBP3-217ENST00000530785 MT2AP02795 61 aa8.05□□□□□ -1.12
LTBP3-217ENST00000530785 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
LTBP3-217ENST00000530785 MT1FP04733 61 aa8.05□□□□□ -1.12
LTBP3-217ENST00000530785 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
LTBP3-217ENST00000530785 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
LTBP3-217ENST00000530785 KRTAP19-8Q3LI54 63 aa7.81□□□□□ -1.16
LTBP3-217ENST00000530785 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
LTBP3-217ENST00000530785 MT1BP07438 61 aa7.73□□□□□ -1.17
LTBP3-217ENST00000530785 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
LTBP3-217ENST00000530785 KRTAP10-5P60370 271 aa7.62□□□□□ -1.19
LTBP3-217ENST00000530785 MT1XP80297 61 aa7.62□□□□□ -1.19
LTBP3-217ENST00000530785 KRTAP8-1Q8IUC2 63 aa7.61□□□□□ -1.19
LTBP3-217ENST00000530785 USH2AO75445 5202 aa7.53□□□□□ -1.2
LTBP3-217ENST00000530785 LCE2BO14633 110 aa7.52□□□□□ -1.21
LTBP3-217ENST00000530785 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
LTBP3-217ENST00000530785 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
LTBP3-217ENST00000530785 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
LTBP3-217ENST00000530785 KRTAP12-3P60328 96 aa7.37□□□□□ -1.23
LTBP3-217ENST00000530785 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
LTBP3-217ENST00000530785 SSPOA2VEC9 5147 aa7.26□□□□□ -1.25
LTBP3-217ENST00000530785 KRTAP9-2Q9BYQ4 174 aa7.18□□□□□ -1.26
LTBP3-217ENST00000530785 KRTAP19-5Q3LI72 72 aa7.03□□□□□ -1.28
LTBP3-217ENST00000530785 KRTAP19-6Q3LI70 58 aa7.01□□□□□ -1.29
LTBP3-217ENST00000530785 KMT2DO14686 5537 aa6.99□□□□□ -1.29
LTBP3-217ENST00000530785 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
LTBP3-217ENST00000530785 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
LTBP3-217ENST00000530785 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
LTBP3-217ENST00000530785 FCGBPQ9Y6R7 5405 aaPredicted RBP6.96□□□□□ -1.29
LTBP3-217ENST00000530785 CRCT1Q9UGL9 99 aa6.88□□□□□ -1.31
LTBP3-217ENST00000530785 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
LTBP3-217ENST00000530785 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
LTBP3-217ENST00000530785 KRTAP2-1Q9BYU5 128 aa6.83□□□□□ -1.32
LTBP3-217ENST00000530785 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
LTBP3-217ENST00000530785 KRTAP19-7Q3SYF9 63 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms