RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 KRTAP17-1Q9BYP8 105 aa6.23□□□□□ -1.41
USP35-207ENST00000530546 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
USP35-207ENST00000530546 A0A1B0GU33 70 aa6.22□□□□□ -1.41
USP35-207ENST00000530546 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.41
USP35-207ENST00000530546 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.42
USP35-207ENST00000530546 KRTAP10-8P60410 259 aa6.21□□□□□ -1.42
USP35-207ENST00000530546 TNXBP22105 4242 aa6.2□□□□□ -1.42
USP35-207ENST00000530546 K7ERS5 55 aa6.19□□□□□ -1.42
USP35-207ENST00000530546 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
USP35-207ENST00000530546 H1FX-AS1Q4G0G2 97 aa6.18□□□□□ -1.42
USP35-207ENST00000530546 MYCBP2O75592 4640 aa6.13□□□□□ -1.43
USP35-207ENST00000530546 EPPK1P58107 5090 aaKnown RBP6.13□□□□□ -1.43
USP35-207ENST00000530546 CRIPTQ9P021 101 aa6.08□□□□□ -1.44
USP35-207ENST00000530546 MT1HL1P0DM35 61 aa6.07□□□□□ -1.44
USP35-207ENST00000530546 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
USP35-207ENST00000530546 BIRC6Q9NR09 4857 aa6.05□□□□□ -1.44
USP35-207ENST00000530546 NDUFAF8A1L188 74 aa6.05□□□□□ -1.44
USP35-207ENST00000530546 XP32Q5T750 250 aa6.04□□□□□ -1.44
USP35-207ENST00000530546 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
USP35-207ENST00000530546 RPL37P61927 97 aaKnown RBP6.02□□□□□ -1.45
USP35-207ENST00000530546 COX6B2Q6YFQ2 88 aa6.02□□□□□ -1.45
USP35-207ENST00000530546 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
USP35-207ENST00000530546 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
USP35-207ENST00000530546 J3QL48 77 aa5.95□□□□□ -1.46
USP35-207ENST00000530546 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
USP35-207ENST00000530546 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
USP35-207ENST00000530546 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.47
USP35-207ENST00000530546 ABCA13Q86UQ4 5058 aa5.89□□□□□ -1.47
USP35-207ENST00000530546 HERC2O95714 4834 aa5.88□□□□□ -1.47
USP35-207ENST00000530546 LRP2P98164 4655 aa5.88□□□□□ -1.47
USP35-207ENST00000530546 LPAP08519 4548 aa5.86□□□□□ -1.47
USP35-207ENST00000530546 KRTAP10-6P60371 365 aaPredicted RBP5.83□□□□□ -1.48
USP35-207ENST00000530546 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
USP35-207ENST00000530546 S4R3F8 94 aa5.81□□□□□ -1.48
USP35-207ENST00000530546 KRTAP3-3Q9BYR6 98 aa5.81□□□□□ -1.48
USP35-207ENST00000530546 KRTAP13-4Q3LI77 160 aa5.8□□□□□ -1.48
USP35-207ENST00000530546 A0A0D9SG42 100 aa5.8□□□□□ -1.48
USP35-207ENST00000530546 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
USP35-207ENST00000530546 PCLOQ9Y6V0 5065 aa5.7□□□□□ -1.5
USP35-207ENST00000530546 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
USP35-207ENST00000530546 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
USP35-207ENST00000530546 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
USP35-207ENST00000530546 MUC17Q685J3 4493 aa5.58□□□□□ -1.52
USP35-207ENST00000530546 M0QZ58 72 aa5.53□□□□□ -1.52
USP35-207ENST00000530546 HERC1Q15751 4861 aa5.52□□□□□ -1.53
USP35-207ENST00000530546 MUC2Q02817 5179 aa5.49□□□□□ -1.53
USP35-207ENST00000530546 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
USP35-207ENST00000530546 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
USP35-207ENST00000530546 KRTAP19-2Q3LHN2 52 aa5.43□□□□□ -1.54
USP35-207ENST00000530546 R4GN34 69 aa5.4□□□□□ -1.54
USP35-207ENST00000530546 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
USP35-207ENST00000530546 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
USP35-207ENST00000530546 FLGP20930 4061 aaPredicted RBP5.31□□□□□ -1.56
USP35-207ENST00000530546 PP632Q6XCG6 107 aa5.29□□□□□ -1.56
USP35-207ENST00000530546 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
USP35-207ENST00000530546 RNF213Q63HN8 5207 aa5.23□□□□□ -1.57
USP35-207ENST00000530546 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
USP35-207ENST00000530546 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
USP35-207ENST00000530546 M0R2T5 61 aa5.18□□□□□ -1.58
USP35-207ENST00000530546 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
USP35-207ENST00000530546 MT1HP80294 61 aa5.1□□□□□ -1.59
USP35-207ENST00000530546 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
USP35-207ENST00000530546 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
USP35-207ENST00000530546 KRTAP10-10P60014 251 aa5□□□□□ -1.61
USP35-207ENST00000530546 MT2AP02795 61 aa4.98□□□□□ -1.61
USP35-207ENST00000530546 MT1FP04733 61 aa4.98□□□□□ -1.61
USP35-207ENST00000530546 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
USP35-207ENST00000530546 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
USP35-207ENST00000530546 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
USP35-207ENST00000530546 TNP1P09430 55 aa4.93□□□□□ -1.62
USP35-207ENST00000530546 INE1O15225 51 aa4.85□□□□□ -1.63
USP35-207ENST00000530546 LCE2AQ5TA79 106 aaPredicted RBP4.77□□□□□ -1.65
USP35-207ENST00000530546 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
USP35-207ENST00000530546 MT1BP07438 61 aa4.74□□□□□ -1.65
USP35-207ENST00000530546 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
USP35-207ENST00000530546 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
USP35-207ENST00000530546 MT1XP80297 61 aa4.66□□□□□ -1.66
USP35-207ENST00000530546 LCE3AQ5TA76 89 aa4.65□□□□□ -1.66
USP35-207ENST00000530546 LCE2BO14633 110 aa4.6□□□□□ -1.67
USP35-207ENST00000530546 USH2AO75445 5202 aa4.57□□□□□ -1.68
USP35-207ENST00000530546 KRTAP9-2Q9BYQ4 174 aa4.55□□□□□ -1.68
USP35-207ENST00000530546 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
USP35-207ENST00000530546 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
USP35-207ENST00000530546 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
USP35-207ENST00000530546 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
USP35-207ENST00000530546 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
USP35-207ENST00000530546 KMT2DO14686 5537 aa4.4□□□□□ -1.71
USP35-207ENST00000530546 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
USP35-207ENST00000530546 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.71
USP35-207ENST00000530546 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.72
USP35-207ENST00000530546 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.72
USP35-207ENST00000530546 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
USP35-207ENST00000530546 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
USP35-207ENST00000530546 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
USP35-207ENST00000530546 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.74
USP35-207ENST00000530546 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.74
USP35-207ENST00000530546 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
USP35-207ENST00000530546 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
USP35-207ENST00000530546 MT1EP04732 61 aa4.05□□□□□ -1.76
USP35-207ENST00000530546 KRTAP2-3P0C7H8 128 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms