RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 SPRR2GQ9BYE4 73 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 RNF213Q63HN8 5207 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 TRPM2O94759 1503 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 ACACAQ13085 2346 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 COL12A1Q99715 3063 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 FRYQ5TBA9 3013 aa0.21□□□□□ -2.38
CAPRIN1-208ENST00000530008 DMXL1Q9Y485 3027 aa0.2□□□□□ -2.38
CAPRIN1-208ENST00000530008 MUC12Q9UKN1 5478 aa0.2□□□□□ -2.38
CAPRIN1-208ENST00000530008 ATMQ13315 3056 aa0.2□□□□□ -2.38
CAPRIN1-208ENST00000530008 PRUNE2Q8WUY3 3088 aa0.2□□□□□ -2.38
CAPRIN1-208ENST00000530008 FAM186AA6NE01 2351 aa0.19□□□□□ -2.38
CAPRIN1-208ENST00000530008 H3BNG1 76 aa0.19□□□□□ -2.38
CAPRIN1-208ENST00000530008 NDUFA1O15239 70 aa0.19□□□□□ -2.38
CAPRIN1-208ENST00000530008 DNAH2Q9P225 4427 aa0.19□□□□□ -2.38
CAPRIN1-208ENST00000530008 SAMD9LQ8IVG5 1584 aa0.19□□□□□ -2.38
CAPRIN1-208ENST00000530008 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
CAPRIN1-208ENST00000530008 DNAH3Q8TD57 4116 aa0.19□□□□□ -2.38
CAPRIN1-208ENST00000530008 ANK3Q12955 4377 aaKnown RBP0.18□□□□□ -2.38
CAPRIN1-208ENST00000530008 SPRR2BP35325 72 aa0.18□□□□□ -2.38
CAPRIN1-208ENST00000530008 KRTAP6-2Q3LI66 62 aa0.18□□□□□ -2.38
CAPRIN1-208ENST00000530008 EPPK1P58107 5090 aaKnown RBP0.18□□□□□ -2.38
CAPRIN1-208ENST00000530008 FLGP20930 4061 aaPredicted RBP0.18□□□□□ -2.38
CAPRIN1-208ENST00000530008 CHD7Q9P2D1 2997 aa0.18□□□□□ -2.38
CAPRIN1-208ENST00000530008 TRIOO75962 3097 aa0.17□□□□□ -2.38
CAPRIN1-208ENST00000530008 ABCA13Q86UQ4 5058 aa0.17□□□□□ -2.38
CAPRIN1-208ENST00000530008 RYR3Q15413 4870 aa0.17□□□□□ -2.38
CAPRIN1-208ENST00000530008 SPENQ96T58 3664 aaKnown RBP0.17□□□□□ -2.38
CAPRIN1-208ENST00000530008 VPS13DQ5THJ4 4388 aa0.17□□□□□ -2.38
CAPRIN1-208ENST00000530008 MGAQ8IWI9 3026 aa0.16□□□□□ -2.38
CAPRIN1-208ENST00000530008 NOP10Q9NPE3 64 aaKnown RBP0.16□□□□□ -2.38
CAPRIN1-208ENST00000530008 HERC1Q15751 4861 aa0.16□□□□□ -2.38
CAPRIN1-208ENST00000530008 HYDINQ4G0P3 5121 aa0.16□□□□□ -2.38
CAPRIN1-208ENST00000530008 FAT1Q14517 4588 aa0.16□□□□□ -2.38
CAPRIN1-208ENST00000530008 FRYLO94915 3013 aa0.16□□□□□ -2.38
CAPRIN1-208ENST00000530008 APOBP04114 4563 aaKnown RBP0.15□□□□□ -2.38
CAPRIN1-208ENST00000530008 DNAH7Q8WXX0 4024 aa0.15□□□□□ -2.39
CAPRIN1-208ENST00000530008 DNAH9Q9NYC9 4486 aa0.15□□□□□ -2.39
CAPRIN1-208ENST00000530008 PKHD1P08F94 4074 aa0.15□□□□□ -2.39
CAPRIN1-208ENST00000530008 LRP2P98164 4655 aa0.15□□□□□ -2.39
CAPRIN1-208ENST00000530008 AKAP9Q99996 3911 aa0.15□□□□□ -2.39
CAPRIN1-208ENST00000530008 DNAH6Q9C0G6 4158 aa0.15□□□□□ -2.39
CAPRIN1-208ENST00000530008 CFAP54Q96N23 3096 aa0.15□□□□□ -2.39
CAPRIN1-208ENST00000530008 C5orf42Q9H799 3197 aa0.14□□□□□ -2.39
CAPRIN1-208ENST00000530008 DNHD1Q96M86 4753 aa0.14□□□□□ -2.39
CAPRIN1-208ENST00000530008 SRCAPQ6ZRS2 3230 aa0.14□□□□□ -2.39
CAPRIN1-208ENST00000530008 SPTBN5Q9NRC6 3674 aaKnown RBP0.14□□□□□ -2.39
CAPRIN1-208ENST00000530008 DYNC2H1Q8NCM8 4307 aaKnown RBP0.14□□□□□ -2.39
CAPRIN1-208ENST00000530008 C9orf92A6NGG3 77 aa0.14□□□□□ -2.39
CAPRIN1-208ENST00000530008 LAMA2P24043 3122 aaKnown RBP0.14□□□□□ -2.39
CAPRIN1-208ENST00000530008 HERC2O95714 4834 aa0.13□□□□□ -2.39
CAPRIN1-208ENST00000530008 M0QY20 66 aa0.13□□□□□ -2.39
CAPRIN1-208ENST00000530008 DEFB131AP59861 70 aa0.13□□□□□ -2.39
CAPRIN1-208ENST00000530008 FAT3Q8TDW7 4589 aa0.13□□□□□ -2.39
CAPRIN1-208ENST00000530008 NBPF19A0A087WUL8 3843 aa0.13□□□□□ -2.39
CAPRIN1-208ENST00000530008 HTTP42858 3142 aa0.13□□□□□ -2.39
CAPRIN1-208ENST00000530008 DUOX1Q9NRD9 1551 aa0.12□□□□□ -2.39
CAPRIN1-208ENST00000530008 CEP350Q5VT06 3117 aa0.11□□□□□ -2.39
CAPRIN1-208ENST00000530008 MROH2BQ7Z745 1585 aa0.11□□□□□ -2.39
CAPRIN1-208ENST00000530008 LAMA1P25391 3075 aa0.11□□□□□ -2.39
CAPRIN1-208ENST00000530008 RANBP2P49792 3224 aaKnown RBP0.11□□□□□ -2.39
CAPRIN1-208ENST00000530008 SPRR2AP35326 72 aa0.11□□□□□ -2.39
CAPRIN1-208ENST00000530008 DEFB110Q30KQ9 67 aa0.11□□□□□ -2.39
CAPRIN1-208ENST00000530008 CLPSL2Q6UWE3 100 aa0.11□□□□□ -2.39
CAPRIN1-208ENST00000530008 STARD9Q9P2P6 4700 aa0.11□□□□□ -2.39
CAPRIN1-208ENST00000530008 DNAH12Q6ZR08 3092 aa0.1□□□□□ -2.39
CAPRIN1-208ENST00000530008 POLR2KP53803 58 aaKnown RBP0.1□□□□□ -2.39
CAPRIN1-208ENST00000530008 DNAH8Q96JB1 4490 aa0.1□□□□□ -2.39
CAPRIN1-208ENST00000530008 ADGRG4Q8IZF6 3080 aa0.1□□□□□ -2.39
CAPRIN1-208ENST00000530008 CFAP47Q6ZTR5 3102 aa0.1□□□□□ -2.39
CAPRIN1-208ENST00000530008 DNAH1Q9P2D7 4330 aa0.1□□□□□ -2.39
CAPRIN1-208ENST00000530008 FREM2Q5SZK8 3169 aa0.09□□□□□ -2.39
CAPRIN1-208ENST00000530008 A8MTW9 85 aa0.09□□□□□ -2.4
CAPRIN1-208ENST00000530008 KRTAP20-1Q3LI63 56 aa0.09□□□□□ -2.4
CAPRIN1-208ENST00000530008 EYSQ5T1H1 3165 aa0.09□□□□□ -2.4
CAPRIN1-208ENST00000530008 WDFY4Q6ZS81 3184 aa0.09□□□□□ -2.4
CAPRIN1-208ENST00000530008 USH2AO75445 5202 aa0.09□□□□□ -2.4
CAPRIN1-208ENST00000530008 GCC2Q8IWJ2 1684 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 BIRC6Q9NR09 4857 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 CELSR3Q9NYQ7 3312 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 M0QZ58 72 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 MT1AP04731 61 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 TNP1P09430 55 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 SPRR2EP22531 72 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 RPL39P62891 51 aaKnown RBP0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 LOC400499M0QZD8 3231 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 LAMA5O15230 3695 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 VPS13AQ96RL7 3174 aa0.08□□□□□ -2.4
CAPRIN1-208ENST00000530008 TRRAPQ9Y4A5 3859 aa0.07□□□□□ -2.4
CAPRIN1-208ENST00000530008 CMYA5Q8N3K9 4069 aa0.07□□□□□ -2.4
CAPRIN1-208ENST00000530008 SNRPGP62308 76 aaKnown RBP0.06□□□□□ -2.4
CAPRIN1-208ENST00000530008 SPRR2FQ96RM1 72 aa0.06□□□□□ -2.4
CAPRIN1-208ENST00000530008 EP400Q96L91 3159 aa0.06□□□□□ -2.4
CAPRIN1-208ENST00000530008 KRTAP19-5Q3LI72 72 aa0.05□□□□□ -2.4
CAPRIN1-208ENST00000530008 PLECQ15149 4684 aaKnown RBP0.05□□□□□ -2.4
CAPRIN1-208ENST00000530008 ZFHX4Q86UP3 3567 aa0.05□□□□□ -2.4
CAPRIN1-208ENST00000530008 LAMA3Q16787 3333 aa0.05□□□□□ -2.4
CAPRIN1-208ENST00000530008 KRTAP8-1Q8IUC2 63 aa0.04□□□□□ -2.4
CAPRIN1-208ENST00000530008 RPL39LQ96EH5 51 aaKnown RBP0.04□□□□□ -2.4
CAPRIN1-208ENST00000530008 DNAH10Q8IVF4 4471 aa0.03□□□□□ -2.4
CAPRIN1-208ENST00000530008 SMR3BP02814 79 aaPredicted RBP0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms