RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 UNQ6190/PRO20217Q6UXQ8 127 aa3.42□□□□□ -1.86
FDFT1-213ENST00000528729 APOBP04114 4563 aaKnown RBP3.42□□□□□ -1.86
FDFT1-213ENST00000528729 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
FDFT1-213ENST00000528729 DEFB104AQ8WTQ1 72 aa3.41□□□□□ -1.86
FDFT1-213ENST00000528729 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.87
FDFT1-213ENST00000528729 Q6ZSA8 131 aa3.4□□□□□ -1.87
FDFT1-213ENST00000528729 KRTAP9-2Q9BYQ4 174 aa3.4□□□□□ -1.87
FDFT1-213ENST00000528729 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
FDFT1-213ENST00000528729 ABCA13Q86UQ4 5058 aa3.39□□□□□ -1.87
FDFT1-213ENST00000528729 A0A1B0GU69 56 aa3.39□□□□□ -1.87
FDFT1-213ENST00000528729 NCR3O14931 201 aa3.39□□□□□ -1.87
FDFT1-213ENST00000528729 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
FDFT1-213ENST00000528729 FAT1Q14517 4588 aa3.38□□□□□ -1.87
FDFT1-213ENST00000528729 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
FDFT1-213ENST00000528729 CRIP1P50238 77 aa3.37□□□□□ -1.87
FDFT1-213ENST00000528729 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
FDFT1-213ENST00000528729 LINC00308Q8TCZ7 52 aa3.36□□□□□ -1.87
FDFT1-213ENST00000528729 VPS13BQ7Z7G8 4022 aa3.36□□□□□ -1.87
FDFT1-213ENST00000528729 HERC1Q15751 4861 aa3.35□□□□□ -1.87
FDFT1-213ENST00000528729 NDUFA1O15239 70 aa3.34□□□□□ -1.87
FDFT1-213ENST00000528729 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
FDFT1-213ENST00000528729 MYCBP2O75592 4640 aa3.33□□□□□ -1.88
FDFT1-213ENST00000528729 ANGP03950 147 aaKnown RBP3.33□□□□□ -1.88
FDFT1-213ENST00000528729 PLAC4Q8WY50 150 aa3.33□□□□□ -1.88
FDFT1-213ENST00000528729 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
FDFT1-213ENST00000528729 SMIM11BQ8TCY0 68 aa3.32□□□□□ -1.88
FDFT1-213ENST00000528729 M0QY20 66 aa3.31□□□□□ -1.88
FDFT1-213ENST00000528729 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
FDFT1-213ENST00000528729 KRTAP10-4P60372 401 aaPredicted RBP3.31□□□□□ -1.88
FDFT1-213ENST00000528729 Q6ZRX8 168 aa3.31□□□□□ -1.88
FDFT1-213ENST00000528729 DNAH8Q96JB1 4490 aa3.29□□□□□ -1.88
FDFT1-213ENST00000528729 GVQW2A0A096LPI5 108 aaPredicted RBP3.29□□□□□ -1.88
FDFT1-213ENST00000528729 LINC00158P58513 81 aa3.29□□□□□ -1.88
FDFT1-213ENST00000528729 LINC00575Q6W349 94 aa3.29□□□□□ -1.88
FDFT1-213ENST00000528729 CLPSL2Q6UWE3 100 aa3.26□□□□□ -1.89
FDFT1-213ENST00000528729 LRP1Q07954 4544 aaKnown RBP3.24□□□□□ -1.89
FDFT1-213ENST00000528729 MT1HL1P0DM35 61 aa3.24□□□□□ -1.89
FDFT1-213ENST00000528729 COX6A2Q02221 97 aa3.24□□□□□ -1.89
FDFT1-213ENST00000528729 Q8IZM0 81 aa3.24□□□□□ -1.89
FDFT1-213ENST00000528729 PCOTHQ58A44 107 aa3.23□□□□□ -1.89
FDFT1-213ENST00000528729 SPINK6Q6UWN8 80 aa3.23□□□□□ -1.89
FDFT1-213ENST00000528729 POLR2KP53803 58 aaKnown RBP3.22□□□□□ -1.89
FDFT1-213ENST00000528729 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
FDFT1-213ENST00000528729 SSBP3-AS1Q7Z2R9 100 aa3.2□□□□□ -1.9
FDFT1-213ENST00000528729 RPL39LQ96EH5 51 aaKnown RBP3.2□□□□□ -1.9
FDFT1-213ENST00000528729 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
FDFT1-213ENST00000528729 A0A096LNI7 61 aa3.19□□□□□ -1.9
FDFT1-213ENST00000528729 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
FDFT1-213ENST00000528729 CDKN2A-AS1Q9UH64 79 aa3.19□□□□□ -1.9
FDFT1-213ENST00000528729 TP53AIP1Q9HCN2 124 aa3.18□□□□□ -1.9
FDFT1-213ENST00000528729 HMCN2Q8NDA2 5059 aa3.16□□□□□ -1.9
FDFT1-213ENST00000528729 TNXBP22105 4242 aa3.14□□□□□ -1.91
FDFT1-213ENST00000528729 UBR4Q5T4S7 5183 aa3.14□□□□□ -1.91
FDFT1-213ENST00000528729 KRTAP13-3Q3SY46 172 aa3.14□□□□□ -1.91
FDFT1-213ENST00000528729 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
FDFT1-213ENST00000528729 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
FDFT1-213ENST00000528729 RPL39P62891 51 aaKnown RBP3.12□□□□□ -1.91
FDFT1-213ENST00000528729 LRP2P98164 4655 aa3.12□□□□□ -1.91
FDFT1-213ENST00000528729 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
FDFT1-213ENST00000528729 C6orf48Q9UBA6 75 aa3.1□□□□□ -1.91
FDFT1-213ENST00000528729 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
FDFT1-213ENST00000528729 CRIPTQ9P021 101 aa3.09□□□□□ -1.91
FDFT1-213ENST00000528729 K7EQZ3 153 aa3.07□□□□□ -1.92
FDFT1-213ENST00000528729 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
FDFT1-213ENST00000528729 TOMM7Q9P0U1 55 aa3.06□□□□□ -1.92
FDFT1-213ENST00000528729 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
FDFT1-213ENST00000528729 IGLV5-48A0A075B6I7 105 aa3.05□□□□□ -1.92
FDFT1-213ENST00000528729 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
FDFT1-213ENST00000528729 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
FDFT1-213ENST00000528729 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
FDFT1-213ENST00000528729 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
FDFT1-213ENST00000528729 KRTAP13-1Q8IUC0 172 aa3□□□□□ -1.93
FDFT1-213ENST00000528729 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
FDFT1-213ENST00000528729 LPAP08519 4548 aa2.99□□□□□ -1.93
FDFT1-213ENST00000528729 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
FDFT1-213ENST00000528729 MRPL34Q9BQ48 92 aaKnown RBP2.98□□□□□ -1.93
FDFT1-213ENST00000528729 MUC2Q02817 5179 aa2.97□□□□□ -1.93
FDFT1-213ENST00000528729 SPINK1P00995 79 aa2.95□□□□□ -1.94
FDFT1-213ENST00000528729 PRLHP81277 87 aa2.95□□□□□ -1.94
FDFT1-213ENST00000528729 H0YAA0 97 aa2.93□□□□□ -1.94
FDFT1-213ENST00000528729 SPRR1AP35321 89 aa2.93□□□□□ -1.94
FDFT1-213ENST00000528729 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
FDFT1-213ENST00000528729 RPS29P62273 56 aaKnown RBP2.92□□□□□ -1.94
FDFT1-213ENST00000528729 WFDC13Q8IUB5 93 aa2.92□□□□□ -1.94
FDFT1-213ENST00000528729 FAT4Q6V0I7 4981 aa2.86□□□□□ -1.95
FDFT1-213ENST00000528729 KRTAP4-7Q9BYR0 210 aa2.85□□□□□ -1.95
FDFT1-213ENST00000528729 SPRR1BP22528 89 aa2.84□□□□□ -1.95
FDFT1-213ENST00000528729 H1FX-AS1Q4G0G2 97 aa2.84□□□□□ -1.95
FDFT1-213ENST00000528729 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
FDFT1-213ENST00000528729 MUC17Q685J3 4493 aa2.84□□□□□ -1.96
FDFT1-213ENST00000528729 MMP24-AS1A0A0U1RRL7 71 aa2.81□□□□□ -1.96
FDFT1-213ENST00000528729 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
FDFT1-213ENST00000528729 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
FDFT1-213ENST00000528729 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
FDFT1-213ENST00000528729 DEFB105AQ8NG35 78 aa2.77□□□□□ -1.97
FDFT1-213ENST00000528729 C9orf92A6NGG3 77 aa2.76□□□□□ -1.97
FDFT1-213ENST00000528729 KRTAP19-2Q3LHN2 52 aa2.76□□□□□ -1.97
FDFT1-213ENST00000528729 MT1HP80294 61 aa2.75□□□□□ -1.97
FDFT1-213ENST00000528729 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
FDFT1-213ENST00000528729 M0R2T5 61 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms