RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 LCE2DQ5TA82 110 aaPredicted RBP4.29□□□□□ -1.72
SOX6-211ENST00000528429 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
SOX6-211ENST00000528429 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
SOX6-211ENST00000528429 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
SOX6-211ENST00000528429 Q5W150 140 aa4.26□□□□□ -1.73
SOX6-211ENST00000528429 HRES1P13985 223 aa4.25□□□□□ -1.73
SOX6-211ENST00000528429 TNXBP22105 4242 aa4.25□□□□□ -1.73
SOX6-211ENST00000528429 MT1HL1P0DM35 61 aa4.24□□□□□ -1.73
SOX6-211ENST00000528429 FAT3Q8TDW7 4589 aa4.24□□□□□ -1.73
SOX6-211ENST00000528429 UQCR11O14957 56 aa4.23□□□□□ -1.73
SOX6-211ENST00000528429 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
SOX6-211ENST00000528429 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
SOX6-211ENST00000528429 CRIPTQ9P021 101 aa4.22□□□□□ -1.73
SOX6-211ENST00000528429 A0A1B0GU69 56 aa4.22□□□□□ -1.73
SOX6-211ENST00000528429 KRTAP3-3Q9BYR6 98 aa4.21□□□□□ -1.74
SOX6-211ENST00000528429 KRTAP3-2Q9BYR7 98 aa4.21□□□□□ -1.74
SOX6-211ENST00000528429 KRTAP13-3Q3SY46 172 aa4.2□□□□□ -1.74
SOX6-211ENST00000528429 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
SOX6-211ENST00000528429 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
SOX6-211ENST00000528429 BIRC6Q9NR09 4857 aa4.17□□□□□ -1.74
SOX6-211ENST00000528429 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
SOX6-211ENST00000528429 HERC2O95714 4834 aa4.15□□□□□ -1.75
SOX6-211ENST00000528429 ACYP2P14621 99 aa4.14□□□□□ -1.75
SOX6-211ENST00000528429 CAMK2N1Q7Z7J9 78 aa4.13□□□□□ -1.75
SOX6-211ENST00000528429 XP32Q5T750 250 aa4.11□□□□□ -1.75
SOX6-211ENST00000528429 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
SOX6-211ENST00000528429 RPL37P61927 97 aaKnown RBP4.08□□□□□ -1.76
SOX6-211ENST00000528429 TPRXLQ17RH7 258 aa4.07□□□□□ -1.76
SOX6-211ENST00000528429 PCLOQ9Y6V0 5065 aa4.04□□□□□ -1.76
SOX6-211ENST00000528429 LPAP08519 4548 aa4.03□□□□□ -1.76
SOX6-211ENST00000528429 LRP2P98164 4655 aa4.03□□□□□ -1.76
SOX6-211ENST00000528429 HERC1Q15751 4861 aa3.98□□□□□ -1.77
SOX6-211ENST00000528429 KRTAP3-1Q9BYR8 98 aa3.97□□□□□ -1.77
SOX6-211ENST00000528429 COX6B2Q6YFQ2 88 aa3.96□□□□□ -1.78
SOX6-211ENST00000528429 A0A1B0GU33 70 aa3.95□□□□□ -1.78
SOX6-211ENST00000528429 H0YAA0 97 aa3.9□□□□□ -1.78
SOX6-211ENST00000528429 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
SOX6-211ENST00000528429 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
SOX6-211ENST00000528429 KRTAP4-1Q9BYQ7 146 aa3.87□□□□□ -1.79
SOX6-211ENST00000528429 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
SOX6-211ENST00000528429 R4GN34 69 aa3.86□□□□□ -1.79
SOX6-211ENST00000528429 S4R3F8 94 aa3.86□□□□□ -1.79
SOX6-211ENST00000528429 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
SOX6-211ENST00000528429 LCE2AQ5TA79 106 aaPredicted RBP3.84□□□□□ -1.8
SOX6-211ENST00000528429 MUC2Q02817 5179 aa3.83□□□□□ -1.8
SOX6-211ENST00000528429 PRO2289Q9P1D8 64 aa3.81□□□□□ -1.8
SOX6-211ENST00000528429 MUC17Q685J3 4493 aa3.79□□□□□ -1.8
SOX6-211ENST00000528429 UBR4Q5T4S7 5183 aa3.75□□□□□ -1.81
SOX6-211ENST00000528429 RNF213Q63HN8 5207 aa3.73□□□□□ -1.81
SOX6-211ENST00000528429 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
SOX6-211ENST00000528429 LCE2BO14633 110 aa3.71□□□□□ -1.82
SOX6-211ENST00000528429 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
SOX6-211ENST00000528429 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
SOX6-211ENST00000528429 FAT4Q6V0I7 4981 aa3.65□□□□□ -1.82
SOX6-211ENST00000528429 FLGP20930 4061 aaPredicted RBP3.64□□□□□ -1.83
SOX6-211ENST00000528429 A0A0D9SG42 100 aa3.63□□□□□ -1.83
SOX6-211ENST00000528429 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
SOX6-211ENST00000528429 M0R2T5 61 aa3.62□□□□□ -1.83
SOX6-211ENST00000528429 M0QZ58 72 aa3.58□□□□□ -1.84
SOX6-211ENST00000528429 LORP23490 312 aaPredicted RBP3.57□□□□□ -1.84
SOX6-211ENST00000528429 MT1HP80294 61 aa3.57□□□□□ -1.84
SOX6-211ENST00000528429 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
SOX6-211ENST00000528429 INE1O15225 51 aa3.48□□□□□ -1.85
SOX6-211ENST00000528429 KRTAP12-1P59990 96 aa3.48□□□□□ -1.85
SOX6-211ENST00000528429 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
SOX6-211ENST00000528429 MT2AP02795 61 aa3.45□□□□□ -1.86
SOX6-211ENST00000528429 MT1FP04733 61 aa3.44□□□□□ -1.86
SOX6-211ENST00000528429 KRTAP9-8Q9BYQ0 159 aa3.44□□□□□ -1.86
SOX6-211ENST00000528429 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
SOX6-211ENST00000528429 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
SOX6-211ENST00000528429 KRTAP9-3Q9BYQ3 159 aa3.3□□□□□ -1.88
SOX6-211ENST00000528429 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
SOX6-211ENST00000528429 MT1BP07438 61 aa3.26□□□□□ -1.89
SOX6-211ENST00000528429 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
SOX6-211ENST00000528429 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
SOX6-211ENST00000528429 USH2AO75445 5202 aa3.19□□□□□ -1.9
SOX6-211ENST00000528429 TNP1P09430 55 aa3.18□□□□□ -1.9
SOX6-211ENST00000528429 MT1XP80297 61 aa3.16□□□□□ -1.9
SOX6-211ENST00000528429 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
SOX6-211ENST00000528429 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
SOX6-211ENST00000528429 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
SOX6-211ENST00000528429 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
SOX6-211ENST00000528429 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
SOX6-211ENST00000528429 SSPOA2VEC9 5147 aa3.03□□□□□ -1.92
SOX6-211ENST00000528429 LOC100996750A0A140TA64 210 aa2.99□□□□□ -1.93
SOX6-211ENST00000528429 KRTAP4-6Q9BYQ5 205 aa2.99□□□□□ -1.93
SOX6-211ENST00000528429 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
SOX6-211ENST00000528429 KMT2DO14686 5537 aa2.98□□□□□ -1.93
SOX6-211ENST00000528429 KRTAP4-8A0A0G2JLE6 195 aa2.96□□□□□ -1.94
SOX6-211ENST00000528429 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.94
SOX6-211ENST00000528429 KRTAP8-1Q8IUC2 63 aa2.94□□□□□ -1.94
SOX6-211ENST00000528429 KRTAP9-2Q9BYQ4 174 aa2.93□□□□□ -1.94
SOX6-211ENST00000528429 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
SOX6-211ENST00000528429 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
SOX6-211ENST00000528429 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
SOX6-211ENST00000528429 LCE5AQ5TCM9 118 aa2.89□□□□□ -1.95
SOX6-211ENST00000528429 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
SOX6-211ENST00000528429 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
SOX6-211ENST00000528429 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
SOX6-211ENST00000528429 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms