RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 UQCRQO14949 82 aa5.01□□□□□ -1.61
NR1H3-230ENST00000527949 LINC00643Q86TS7 51 aa5.01□□□□□ -1.61
NR1H3-230ENST00000527949 KRTAP3-3Q9BYR6 98 aa5.01□□□□□ -1.61
NR1H3-230ENST00000527949 ATOX1O00244 68 aa5□□□□□ -1.61
NR1H3-230ENST00000527949 MT1BP07438 61 aa5□□□□□ -1.61
NR1H3-230ENST00000527949 KLKP1Q107X0 134 aa5□□□□□ -1.61
NR1H3-230ENST00000527949 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
NR1H3-230ENST00000527949 HIST1H4AP62805 103 aaKnown RBP4.99□□□□□ -1.61
NR1H3-230ENST00000527949 Q5VV11 94 aa4.99□□□□□ -1.61
NR1H3-230ENST00000527949 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
NR1H3-230ENST00000527949 H0YAA0 97 aa4.95□□□□□ -1.62
NR1H3-230ENST00000527949 IMUPQ9GZP8 106 aa4.95□□□□□ -1.62
NR1H3-230ENST00000527949 A8MUN3 132 aa4.94□□□□□ -1.62
NR1H3-230ENST00000527949 H0Y9P7 68 aa4.94□□□□□ -1.62
NR1H3-230ENST00000527949 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
NR1H3-230ENST00000527949 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
NR1H3-230ENST00000527949 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
NR1H3-230ENST00000527949 A0A087WVE0 104 aa4.91□□□□□ -1.62
NR1H3-230ENST00000527949 NDUFC1O43677 76 aa4.91□□□□□ -1.62
NR1H3-230ENST00000527949 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
NR1H3-230ENST00000527949 KRTAP3-2Q9BYR7 98 aa4.9□□□□□ -1.63
NR1H3-230ENST00000527949 OCR1Q9BZK8 76 aa4.87□□□□□ -1.63
NR1H3-230ENST00000527949 H3BPC8 53 aa4.85□□□□□ -1.63
NR1H3-230ENST00000527949 MT-ATP8P03928 68 aa4.85□□□□□ -1.63
NR1H3-230ENST00000527949 SCGB1A1P11684 91 aa4.85□□□□□ -1.63
NR1H3-230ENST00000527949 MP68P56378 58 aa4.85□□□□□ -1.63
NR1H3-230ENST00000527949 LINC00208Q96KT6 92 aa4.85□□□□□ -1.63
NR1H3-230ENST00000527949 KMT2DO14686 5537 aa4.81□□□□□ -1.64
NR1H3-230ENST00000527949 ADM2Q7Z4H4 148 aa4.78□□□□□ -1.64
NR1H3-230ENST00000527949 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
NR1H3-230ENST00000527949 SMIM20Q8N5G0 67 aa4.76□□□□□ -1.65
NR1H3-230ENST00000527949 DMAC1Q96GE9 116 aa4.76□□□□□ -1.65
NR1H3-230ENST00000527949 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
NR1H3-230ENST00000527949 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
NR1H3-230ENST00000527949 SPRR2EP22531 72 aa4.75□□□□□ -1.65
NR1H3-230ENST00000527949 SPRR2BP35325 72 aa4.75□□□□□ -1.65
NR1H3-230ENST00000527949 SPRR2AP35326 72 aa4.75□□□□□ -1.65
NR1H3-230ENST00000527949 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
NR1H3-230ENST00000527949 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
NR1H3-230ENST00000527949 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
NR1H3-230ENST00000527949 TRAV7A0A075B6U4 112 aa4.7□□□□□ -1.66
NR1H3-230ENST00000527949 R4GN34 69 aa4.69□□□□□ -1.66
NR1H3-230ENST00000527949 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
NR1H3-230ENST00000527949 P0C880 135 aa4.67□□□□□ -1.66
NR1H3-230ENST00000527949 MT1XP80297 61 aa4.67□□□□□ -1.66
NR1H3-230ENST00000527949 SERP2Q8N6R1 65 aa4.64□□□□□ -1.67
NR1H3-230ENST00000527949 M0QZ58 72 aa4.63□□□□□ -1.67
NR1H3-230ENST00000527949 ACYP2P14621 99 aa4.63□□□□□ -1.67
NR1H3-230ENST00000527949 KRTAP12-2P59991 146 aa4.63□□□□□ -1.67
NR1H3-230ENST00000527949 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
NR1H3-230ENST00000527949 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
NR1H3-230ENST00000527949 SPRR2DP22532 72 aa4.61□□□□□ -1.67
NR1H3-230ENST00000527949 SPTSSBQ8NFR3 76 aa4.6□□□□□ -1.67
NR1H3-230ENST00000527949 ANAPC13Q9BS18 74 aa4.59□□□□□ -1.67
NR1H3-230ENST00000527949 SNURFQ9Y675 71 aa4.59□□□□□ -1.67
NR1H3-230ENST00000527949 COX7CP15954 63 aa4.57□□□□□ -1.68
NR1H3-230ENST00000527949 SPANXA2-OT1Q8N9U9 137 aa4.52□□□□□ -1.69
NR1H3-230ENST00000527949 SVIPQ8NHG7 77 aa4.52□□□□□ -1.69
NR1H3-230ENST00000527949 LINC01554Q52M75 96 aa4.51□□□□□ -1.69
NR1H3-230ENST00000527949 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
NR1H3-230ENST00000527949 CHKB-CPT1BH3BT56 60 aa4.49□□□□□ -1.69
NR1H3-230ENST00000527949 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
NR1H3-230ENST00000527949 CCDC179H3BU77 68 aa4.44□□□□□ -1.7
NR1H3-230ENST00000527949 PCP4P48539 62 aa4.44□□□□□ -1.7
NR1H3-230ENST00000527949 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
NR1H3-230ENST00000527949 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
NR1H3-230ENST00000527949 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
NR1H3-230ENST00000527949 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
NR1H3-230ENST00000527949 H7BZZ5 65 aa4.41□□□□□ -1.7
NR1H3-230ENST00000527949 CYSTM1Q9H1C7 97 aa4.39□□□□□ -1.71
NR1H3-230ENST00000527949 ATP5EP56381 51 aaPredicted RBP4.36□□□□□ -1.71
NR1H3-230ENST00000527949 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
NR1H3-230ENST00000527949 COA5Q86WW8 74 aa4.35□□□□□ -1.71
NR1H3-230ENST00000527949 TMEM258P61165 79 aa4.32□□□□□ -1.72
NR1H3-230ENST00000527949 CAMK2N1Q7Z7J9 78 aa4.29□□□□□ -1.72
NR1H3-230ENST00000527949 SEC61GP60059 68 aa4.28□□□□□ -1.72
NR1H3-230ENST00000527949 SERP1Q9Y6X1 66 aa4.27□□□□□ -1.73
NR1H3-230ENST00000527949 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
NR1H3-230ENST00000527949 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
NR1H3-230ENST00000527949 A0A1B0GU33 70 aa4.21□□□□□ -1.74
NR1H3-230ENST00000527949 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
NR1H3-230ENST00000527949 A0A0D9SG42 100 aa4.17□□□□□ -1.74
NR1H3-230ENST00000527949 A0A1B0GU69 56 aa4.16□□□□□ -1.74
NR1H3-230ENST00000527949 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
NR1H3-230ENST00000527949 SPATA8Q6RVD6 105 aa4.16□□□□□ -1.74
NR1H3-230ENST00000527949 MT1EP04732 61 aa4.15□□□□□ -1.75
NR1H3-230ENST00000527949 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
NR1H3-230ENST00000527949 PRR15LQ9BU68 103 aa4.15□□□□□ -1.75
NR1H3-230ENST00000527949 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
NR1H3-230ENST00000527949 SMIM26A0A096LP01 95 aa4.12□□□□□ -1.75
NR1H3-230ENST00000527949 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
NR1H3-230ENST00000527949 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
NR1H3-230ENST00000527949 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
NR1H3-230ENST00000527949 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
NR1H3-230ENST00000527949 V9GYY9 64 aa4.07□□□□□ -1.76
NR1H3-230ENST00000527949 MT1GP13640 62 aa4.06□□□□□ -1.76
NR1H3-230ENST00000527949 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
NR1H3-230ENST00000527949 MT4P47944 62 aa4.02□□□□□ -1.77
NR1H3-230ENST00000527949 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
NR1H3-230ENST00000527949 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms