RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 LINC00208Q96KT6 92 aa11.96□□□□□ -0.49
TSPAN4-217ENST00000527644 MP68P56378 58 aa11.93□□□□□ -0.5
TSPAN4-217ENST00000527644 SYNE2Q8WXH0 6885 aaKnown RBP11.92□□□□□ -0.5
TSPAN4-217ENST00000527644 MACF1Q9UPN3 7388 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-217ENST00000527644 KLKP1Q107X0 134 aa11.9□□□□□ -0.5
TSPAN4-217ENST00000527644 A8MUN3 132 aa11.89□□□□□ -0.51
TSPAN4-217ENST00000527644 SPRR2GQ9BYE4 73 aa11.89□□□□□ -0.51
TSPAN4-217ENST00000527644 NDUFC1O43677 76 aa11.86□□□□□ -0.51
TSPAN4-217ENST00000527644 IMUPQ9GZP8 106 aa11.82□□□□□ -0.52
TSPAN4-217ENST00000527644 KRTAP19-8Q3LI54 63 aa11.8□□□□□ -0.52
TSPAN4-217ENST00000527644 Q5VV11 94 aa11.8□□□□□ -0.52
TSPAN4-217ENST00000527644 H3BPC8 53 aa11.78□□□□□ -0.52
TSPAN4-217ENST00000527644 MT1BP07438 61 aa11.77□□□□□ -0.53
TSPAN4-217ENST00000527644 SCGB1A1P11684 91 aa11.77□□□□□ -0.53
TSPAN4-217ENST00000527644 CRIPTQ9P021 101 aa11.77□□□□□ -0.53
TSPAN4-217ENST00000527644 H0YAA0 97 aa11.74□□□□□ -0.53
TSPAN4-217ENST00000527644 A6NN06 94 aa11.62□□□□□ -0.55
TSPAN4-217ENST00000527644 K7ERU9 68 aa11.6□□□□□ -0.55
TSPAN4-217ENST00000527644 ADM2Q7Z4H4 148 aa11.59□□□□□ -0.55
TSPAN4-217ENST00000527644 MT-ATP8P03928 68 aa11.57□□□□□ -0.56
TSPAN4-217ENST00000527644 DMAC1Q96GE9 116 aa11.57□□□□□ -0.56
TSPAN4-217ENST00000527644 KRTAP10-5P60370 271 aa11.5□□□□□ -0.57
TSPAN4-217ENST00000527644 SMIM20Q8N5G0 67 aa11.49□□□□□ -0.57
TSPAN4-217ENST00000527644 KRTAP6-3Q3LI67 103 aa11.46□□□□□ -0.57
TSPAN4-217ENST00000527644 TRAV7A0A075B6U4 112 aa11.45□□□□□ -0.58
TSPAN4-217ENST00000527644 C20orf197Q8N268 126 aa11.36□□□□□ -0.59
TSPAN4-217ENST00000527644 ACYP2P14621 99 aa11.33□□□□□ -0.6
TSPAN4-217ENST00000527644 P0C880 135 aa11.32□□□□□ -0.6
TSPAN4-217ENST00000527644 R4GN34 69 aa11.3□□□□□ -0.6
TSPAN4-217ENST00000527644 KRTAP3-2Q9BYR7 98 aa11.25□□□□□ -0.61
TSPAN4-217ENST00000527644 NEBP20929 6669 aa11.21□□□□□ -0.61
TSPAN4-217ENST00000527644 M0QZ58 72 aa11.2□□□□□ -0.62
TSPAN4-217ENST00000527644 PLAC4Q8WY50 150 aa11.2□□□□□ -0.62
TSPAN4-217ENST00000527644 SPTSSBQ8NFR3 76 aa11.19□□□□□ -0.62
TSPAN4-217ENST00000527644 SNURFQ9Y675 71 aa11.19□□□□□ -0.62
TSPAN4-217ENST00000527644 PRO2289Q9P1D8 64 aa11.14□□□□□ -0.63
TSPAN4-217ENST00000527644 CHKB-CPT1BH3BT56 60 aa11.1□□□□□ -0.63
TSPAN4-217ENST00000527644 SERP2Q8N6R1 65 aa11.1□□□□□ -0.63
TSPAN4-217ENST00000527644 MUC12Q9UKN1 5478 aa11.08□□□□□ -0.63
TSPAN4-217ENST00000527644 SPANXA2-OT1Q8N9U9 137 aa11.07□□□□□ -0.64
TSPAN4-217ENST00000527644 MT1XP80297 61 aa11.06□□□□□ -0.64
TSPAN4-217ENST00000527644 LINC01554Q52M75 96 aa11.02□□□□□ -0.65
TSPAN4-217ENST00000527644 KRTAP5-9P26371 169 aa10.98□□□□□ -0.65
TSPAN4-217ENST00000527644 KMT2DO14686 5537 aa10.83□□□□□ -0.68
TSPAN4-217ENST00000527644 KRTAP12-2P59991 146 aa10.8□□□□□ -0.68
TSPAN4-217ENST00000527644 KRTAP20-1Q3LI63 56 aa10.78□□□□□ -0.68
TSPAN4-217ENST00000527644 COX7CP15954 63 aa10.77□□□□□ -0.69
TSPAN4-217ENST00000527644 COA5Q86WW8 74 aa10.73□□□□□ -0.69
TSPAN4-217ENST00000527644 MDN1Q9NU22 5596 aa10.7□□□□□ -0.7
TSPAN4-217ENST00000527644 KRTAP8-1Q8IUC2 63 aa10.67□□□□□ -0.7
TSPAN4-217ENST00000527644 SPRR2FQ96RM1 72 aa10.67□□□□□ -0.7
TSPAN4-217ENST00000527644 KRTAP13-4Q3LI77 160 aa10.61□□□□□ -0.71
TSPAN4-217ENST00000527644 H7BZZ5 65 aa10.59□□□□□ -0.71
TSPAN4-217ENST00000527644 KRTAP10-7P60409 375 aaPredicted RBP10.56□□□□□ -0.72
TSPAN4-217ENST00000527644 CYSTM1Q9H1C7 97 aa10.56□□□□□ -0.72
TSPAN4-217ENST00000527644 SEC61GP60059 68 aa10.55□□□□□ -0.72
TSPAN4-217ENST00000527644 KRTAP4-8A0A0G2JLE6 195 aa10.54□□□□□ -0.72
TSPAN4-217ENST00000527644 KRTAP4-8Q9BYQ9 185 aa10.54□□□□□ -0.72
TSPAN4-217ENST00000527644 KRTAP10-12P60413 245 aa10.53□□□□□ -0.72
TSPAN4-217ENST00000527644 SERP1Q9Y6X1 66 aa10.52□□□□□ -0.73
TSPAN4-217ENST00000527644 SPRR2EP22531 72 aa10.48□□□□□ -0.73
TSPAN4-217ENST00000527644 SPRR2BP35325 72 aa10.48□□□□□ -0.73
TSPAN4-217ENST00000527644 SPRR2AP35326 72 aa10.48□□□□□ -0.73
TSPAN4-217ENST00000527644 ANAPC13Q9BS18 74 aa10.43□□□□□ -0.74
TSPAN4-217ENST00000527644 CAMK2N1Q7Z7J9 78 aa10.41□□□□□ -0.74
TSPAN4-217ENST00000527644 LCE1AQ5T7P2 110 aa10.37□□□□□ -0.75
TSPAN4-217ENST00000527644 KRTAP2-3P0C7H8 128 aa10.35□□□□□ -0.75
TSPAN4-217ENST00000527644 KRTAP2-4Q9BYR9 128 aa10.35□□□□□ -0.75
TSPAN4-217ENST00000527644 A0A1B0GU33 70 aa10.34□□□□□ -0.75
TSPAN4-217ENST00000527644 A0A0D9SG42 100 aa10.3□□□□□ -0.76
TSPAN4-217ENST00000527644 SPATA8Q6RVD6 105 aa10.3□□□□□ -0.76
TSPAN4-217ENST00000527644 CCDC179H3BU77 68 aa10.21□□□□□ -0.77
TSPAN4-217ENST00000527644 A0A1B0GU69 56 aa10.2□□□□□ -0.78
TSPAN4-217ENST00000527644 SPINT4Q6UDR6 99 aa10.17□□□□□ -0.78
TSPAN4-217ENST00000527644 SPRR2DP22532 72 aa10.13□□□□□ -0.79
TSPAN4-217ENST00000527644 KRTAP12-1P59990 96 aa10.11□□□□□ -0.79
TSPAN4-217ENST00000527644 ATP5EP56381 51 aaPredicted RBP10.1□□□□□ -0.79
TSPAN4-217ENST00000527644 SMIM26A0A096LP01 95 aa10.06□□□□□ -0.8
TSPAN4-217ENST00000527644 KRTAP2-2Q9BYT5 123 aa10.01□□□□□ -0.81
TSPAN4-217ENST00000527644 KRTAP2-1Q9BYU5 128 aa10.01□□□□□ -0.81
TSPAN4-217ENST00000527644 PRR15LQ9BU68 103 aa9.94□□□□□ -0.82
TSPAN4-217ENST00000527644 A8MU10 97 aa9.93□□□□□ -0.82
TSPAN4-217ENST00000527644 KRTAP19-7Q3SYF9 63 aa9.89□□□□□ -0.83
TSPAN4-217ENST00000527644 LINC01558Q9Y6Z2 57 aa9.86□□□□□ -0.83
TSPAN4-217ENST00000527644 TMEM258P61165 79 aa9.85□□□□□ -0.83
TSPAN4-217ENST00000527644 LCE3BQ5TA77 95 aa9.85□□□□□ -0.83
TSPAN4-217ENST00000527644 MT1EP04732 61 aa9.81□□□□□ -0.84
TSPAN4-217ENST00000527644 LCE5AQ5TCM9 118 aa9.72□□□□□ -0.85
TSPAN4-217ENST00000527644 KRTAP19-3Q7Z4W3 81 aa9.71□□□□□ -0.86
TSPAN4-217ENST00000527644 KRTAP19-5Q3LI72 72 aa9.67□□□□□ -0.86
TSPAN4-217ENST00000527644 C10orf95Q9H7T3 257 aa9.66□□□□□ -0.86
TSPAN4-217ENST00000527644 TNP1P09430 55 aa9.63□□□□□ -0.87
TSPAN4-217ENST00000527644 UQCR11O14957 56 aa9.61□□□□□ -0.87
TSPAN4-217ENST00000527644 DSTQ03001 7570 aaKnown RBP9.53□□□□□ -0.88
TSPAN4-217ENST00000527644 MT1GP13640 62 aa9.51□□□□□ -0.89
TSPAN4-217ENST00000527644 LCE3AQ5TA76 89 aa9.51□□□□□ -0.89
TSPAN4-217ENST00000527644 PP632Q6XCG6 107 aa9.43□□□□□ -0.9
TSPAN4-217ENST00000527644 GPR98Q8WXG9 6306 aa9.42□□□□□ -0.9
TSPAN4-217ENST00000527644 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
TSPAN4-217ENST00000527644 MT1LQ93083 61 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms