RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 RYR3Q15413 4870 aa3.94□□□□□ -1.78
SOX6-208ENST00000527619 RYR2Q92736 4967 aa3.93□□□□□ -1.78
SOX6-208ENST00000527619 KRTAP1-4P0C5Y4 121 aa3.93□□□□□ -1.78
SOX6-208ENST00000527619 DNAH5Q8TE73 4624 aa3.92□□□□□ -1.78
SOX6-208ENST00000527619 A0A0D9SG42 100 aa3.89□□□□□ -1.79
SOX6-208ENST00000527619 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
SOX6-208ENST00000527619 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
SOX6-208ENST00000527619 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
SOX6-208ENST00000527619 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
SOX6-208ENST00000527619 PLAC4Q8WY50 150 aa3.87□□□□□ -1.79
SOX6-208ENST00000527619 RPS29P62273 56 aaKnown RBP3.86□□□□□ -1.79
SOX6-208ENST00000527619 C9orf92A6NGG3 77 aa3.86□□□□□ -1.79
SOX6-208ENST00000527619 R4GN34 69 aa3.86□□□□□ -1.79
SOX6-208ENST00000527619 VPS13BQ7Z7G8 4022 aa3.84□□□□□ -1.8
SOX6-208ENST00000527619 S4R3F8 94 aa3.83□□□□□ -1.8
SOX6-208ENST00000527619 KRTAP10-2P60368 255 aa3.83□□□□□ -1.8
SOX6-208ENST00000527619 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
SOX6-208ENST00000527619 FAT2Q9NYQ8 4349 aa3.82□□□□□ -1.8
SOX6-208ENST00000527619 PKD1P98161 4303 aa3.8□□□□□ -1.8
SOX6-208ENST00000527619 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
SOX6-208ENST00000527619 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
SOX6-208ENST00000527619 KRTAP10-1P60331 282 aa3.79□□□□□ -1.8
SOX6-208ENST00000527619 KRTAP10-8P60410 259 aa3.79□□□□□ -1.8
SOX6-208ENST00000527619 PKHD1P08F94 4074 aa3.78□□□□□ -1.8
SOX6-208ENST00000527619 XP32Q5T750 250 aa3.78□□□□□ -1.8
SOX6-208ENST00000527619 PKHD1L1Q86WI1 4243 aa3.75□□□□□ -1.81
SOX6-208ENST00000527619 DYNC1H1Q14204 4646 aaKnown RBP3.75□□□□□ -1.81
SOX6-208ENST00000527619 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
SOX6-208ENST00000527619 BIRC6Q9NR09 4857 aa3.73□□□□□ -1.81
SOX6-208ENST00000527619 DMBT1Q9UGM3 2413 aaPredicted RBP3.72□□□□□ -1.81
SOX6-208ENST00000527619 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
SOX6-208ENST00000527619 SMR3BP02814 79 aaPredicted RBP3.69□□□□□ -1.82
SOX6-208ENST00000527619 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
SOX6-208ENST00000527619 RYR1P21817 5038 aa3.67□□□□□ -1.82
SOX6-208ENST00000527619 HSPG2P98160 4391 aa3.66□□□□□ -1.82
SOX6-208ENST00000527619 INE1O15225 51 aa3.65□□□□□ -1.82
SOX6-208ENST00000527619 FAT1Q14517 4588 aa3.64□□□□□ -1.83
SOX6-208ENST00000527619 M0QZ58 72 aa3.64□□□□□ -1.83
SOX6-208ENST00000527619 HERC2O95714 4834 aa3.64□□□□□ -1.83
SOX6-208ENST00000527619 Q5VSD8 79 aa3.64□□□□□ -1.83
SOX6-208ENST00000527619 KRTAP17-1Q9BYP8 105 aa3.64□□□□□ -1.83
SOX6-208ENST00000527619 LRP1Q07954 4544 aaKnown RBP3.63□□□□□ -1.83
SOX6-208ENST00000527619 KRTAP4-5Q9BYR2 181 aa3.62□□□□□ -1.83
SOX6-208ENST00000527619 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
SOX6-208ENST00000527619 FAT3Q8TDW7 4589 aa3.6□□□□□ -1.83
SOX6-208ENST00000527619 TNXBP22105 4242 aa3.59□□□□□ -1.83
SOX6-208ENST00000527619 KRTAP10-4P60372 401 aaPredicted RBP3.57□□□□□ -1.84
SOX6-208ENST00000527619 ABCA13Q86UQ4 5058 aa3.56□□□□□ -1.84
SOX6-208ENST00000527619 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
SOX6-208ENST00000527619 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
SOX6-208ENST00000527619 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
SOX6-208ENST00000527619 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
SOX6-208ENST00000527619 HERC1Q15751 4861 aa3.42□□□□□ -1.86
SOX6-208ENST00000527619 LPAP08519 4548 aa3.39□□□□□ -1.87
SOX6-208ENST00000527619 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
SOX6-208ENST00000527619 LRP2P98164 4655 aa3.28□□□□□ -1.88
SOX6-208ENST00000527619 TNP1P09430 55 aa3.26□□□□□ -1.89
SOX6-208ENST00000527619 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
SOX6-208ENST00000527619 MUC17Q685J3 4493 aa3.21□□□□□ -1.89
SOX6-208ENST00000527619 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
SOX6-208ENST00000527619 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
SOX6-208ENST00000527619 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
SOX6-208ENST00000527619 RNF213Q63HN8 5207 aa3.14□□□□□ -1.91
SOX6-208ENST00000527619 MUC2Q02817 5179 aa3.1□□□□□ -1.91
SOX6-208ENST00000527619 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
SOX6-208ENST00000527619 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
SOX6-208ENST00000527619 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
SOX6-208ENST00000527619 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
SOX6-208ENST00000527619 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
SOX6-208ENST00000527619 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
SOX6-208ENST00000527619 FAT4Q6V0I7 4981 aa3□□□□□ -1.93
SOX6-208ENST00000527619 LCE4AQ5TA78 99 aa3□□□□□ -1.93
SOX6-208ENST00000527619 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
SOX6-208ENST00000527619 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.93
SOX6-208ENST00000527619 KRTAP9-6A0A140TA67 174 aa2.95□□□□□ -1.94
SOX6-208ENST00000527619 KRTAP9-7A8MTY7 169 aa2.95□□□□□ -1.94
SOX6-208ENST00000527619 SPRR2GQ9BYE4 73 aa2.94□□□□□ -1.94
SOX6-208ENST00000527619 M0R2T5 61 aa2.92□□□□□ -1.94
SOX6-208ENST00000527619 MT1HP80294 61 aa2.92□□□□□ -1.94
SOX6-208ENST00000527619 KRTAP19-4Q3LI73 84 aa2.92□□□□□ -1.94
SOX6-208ENST00000527619 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
SOX6-208ENST00000527619 KRTAP19-1Q8IUB9 90 aa2.89□□□□□ -1.95
SOX6-208ENST00000527619 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
SOX6-208ENST00000527619 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
SOX6-208ENST00000527619 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
SOX6-208ENST00000527619 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
SOX6-208ENST00000527619 KRTAP9-8Q9BYQ0 159 aa2.78□□□□□ -1.96
SOX6-208ENST00000527619 KRTAP9-2Q9BYQ4 174 aa2.77□□□□□ -1.97
SOX6-208ENST00000527619 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
SOX6-208ENST00000527619 MT1XP80297 61 aa2.76□□□□□ -1.97
SOX6-208ENST00000527619 MT2AP02795 61 aa2.75□□□□□ -1.97
SOX6-208ENST00000527619 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
SOX6-208ENST00000527619 MT1FP04733 61 aa2.73□□□□□ -1.97
SOX6-208ENST00000527619 KRTAP9-3Q9BYQ3 159 aa2.73□□□□□ -1.97
SOX6-208ENST00000527619 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
SOX6-208ENST00000527619 MT1BP07438 61 aa2.7□□□□□ -1.98
SOX6-208ENST00000527619 FSIP2Q5CZC0 6907 aa2.7□□□□□ -1.98
SOX6-208ENST00000527619 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
SOX6-208ENST00000527619 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
SOX6-208ENST00000527619 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms