RNA–Protein interactions for RNA: ENST00000527224.1

PACS1-205, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 3,024 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-205ENST00000527224 KRTAP10-1P60331 282 aa9.59□□□□□ -0.87
PACS1-205ENST00000527224 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
PACS1-205ENST00000527224 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
PACS1-205ENST00000527224 PKD1P98161 4303 aa9.41□□□□□ -0.9
PACS1-205ENST00000527224 KRTAP12-1P59990 96 aa9.4□□□□□ -0.9
PACS1-205ENST00000527224 XP32Q5T750 250 aa9.39□□□□□ -0.91
PACS1-205ENST00000527224 SMR3BP02814 79 aaPredicted RBP9.37□□□□□ -0.91
PACS1-205ENST00000527224 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
PACS1-205ENST00000527224 KRTAP10-8P60410 259 aa9.29□□□□□ -0.92
PACS1-205ENST00000527224 RPS29P62273 56 aaKnown RBP9.25□□□□□ -0.93
PACS1-205ENST00000527224 PLAC4Q8WY50 150 aa9.24□□□□□ -0.93
PACS1-205ENST00000527224 SACSQ9NZJ4 4579 aa9.2□□□□□ -0.94
PACS1-205ENST00000527224 FAT1Q14517 4588 aa9.16□□□□□ -0.94
PACS1-205ENST00000527224 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
PACS1-205ENST00000527224 MYCBP2O75592 4640 aa9.11□□□□□ -0.95
PACS1-205ENST00000527224 HSPG2P98160 4391 aa9.1□□□□□ -0.95
PACS1-205ENST00000527224 KRTAP21-3Q3LHN1 58 aa9.1□□□□□ -0.95
PACS1-205ENST00000527224 APOBP04114 4563 aaKnown RBP9.09□□□□□ -0.95
PACS1-205ENST00000527224 KMT2CQ8NEZ4 4911 aaKnown RBP9.02□□□□□ -0.97
PACS1-205ENST00000527224 PKHD1L1Q86WI1 4243 aa9□□□□□ -0.97
PACS1-205ENST00000527224 A0A1B0GVY2 172 aa9□□□□□ -0.97
PACS1-205ENST00000527224 LRP1Q07954 4544 aaKnown RBP8.94□□□□□ -0.98
PACS1-205ENST00000527224 M0QZ58 72 aa8.93□□□□□ -0.98
PACS1-205ENST00000527224 KRTAP10-4P60372 401 aaPredicted RBP8.92□□□□□ -0.98
PACS1-205ENST00000527224 RYR2Q92736 4967 aa8.91□□□□□ -0.98
PACS1-205ENST00000527224 LPAP08519 4548 aa8.9□□□□□ -0.98
PACS1-205ENST00000527224 FAT3Q8TDW7 4589 aa8.86□□□□□ -0.99
PACS1-205ENST00000527224 R4GN34 69 aa8.78□□□□□ -1
PACS1-205ENST00000527224 Q5VSD8 79 aa8.73□□□□□ -1.01
PACS1-205ENST00000527224 RYR3Q15413 4870 aa8.69□□□□□ -1.02
PACS1-205ENST00000527224 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
PACS1-205ENST00000527224 KRTAP17-1Q9BYP8 105 aa8.65□□□□□ -1.02
PACS1-205ENST00000527224 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
PACS1-205ENST00000527224 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
PACS1-205ENST00000527224 TNXBP22105 4242 aa8.61□□□□□ -1.03
PACS1-205ENST00000527224 LRP2P98164 4655 aa8.57□□□□□ -1.04
PACS1-205ENST00000527224 RYR1P21817 5038 aa8.53□□□□□ -1.04
PACS1-205ENST00000527224 CAMK2N1Q7Z7J9 78 aa8.49□□□□□ -1.05
PACS1-205ENST00000527224 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
PACS1-205ENST00000527224 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
PACS1-205ENST00000527224 MT1HL1P0DM35 61 aa8.4□□□□□ -1.07
PACS1-205ENST00000527224 KRTAP4-5Q9BYR2 181 aa8.3□□□□□ -1.08
PACS1-205ENST00000527224 ABCA13Q86UQ4 5058 aa8.26□□□□□ -1.09
PACS1-205ENST00000527224 SPRR5A0A1B0GTR4 108 aa8.25□□□□□ -1.09
PACS1-205ENST00000527224 PRO2289Q9P1D8 64 aa8.25□□□□□ -1.09
PACS1-205ENST00000527224 TNP1P09430 55 aa8.12□□□□□ -1.11
PACS1-205ENST00000527224 J3QL48 77 aa8.02□□□□□ -1.13
PACS1-205ENST00000527224 HERC2O95714 4834 aa7.93□□□□□ -1.14
PACS1-205ENST00000527224 MUC17Q685J3 4493 aa7.9□□□□□ -1.15
PACS1-205ENST00000527224 INE1O15225 51 aa7.88□□□□□ -1.15
PACS1-205ENST00000527224 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
PACS1-205ENST00000527224 MUC2Q02817 5179 aa7.85□□□□□ -1.15
PACS1-205ENST00000527224 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
PACS1-205ENST00000527224 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
PACS1-205ENST00000527224 HERC1Q15751 4861 aa7.66□□□□□ -1.18
PACS1-205ENST00000527224 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
PACS1-205ENST00000527224 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
PACS1-205ENST00000527224 PCLOQ9Y6V0 5065 aa7.61□□□□□ -1.19
PACS1-205ENST00000527224 FLGP20930 4061 aaPredicted RBP7.48□□□□□ -1.21
PACS1-205ENST00000527224 FAT4Q6V0I7 4981 aa7.44□□□□□ -1.22
PACS1-205ENST00000527224 RNF213Q63HN8 5207 aa7.39□□□□□ -1.23
PACS1-205ENST00000527224 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
PACS1-205ENST00000527224 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
PACS1-205ENST00000527224 UBR4Q5T4S7 5183 aa7.28□□□□□ -1.24
PACS1-205ENST00000527224 M0R2T5 61 aa7.26□□□□□ -1.25
PACS1-205ENST00000527224 KRTAP19-1Q8IUB9 90 aa7.26□□□□□ -1.25
PACS1-205ENST00000527224 KRTAP10-12P60413 245 aa7.25□□□□□ -1.25
PACS1-205ENST00000527224 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
PACS1-205ENST00000527224 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
PACS1-205ENST00000527224 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
PACS1-205ENST00000527224 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
PACS1-205ENST00000527224 MT1HP80294 61 aa7.04□□□□□ -1.28
PACS1-205ENST00000527224 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
PACS1-205ENST00000527224 MT1FP04733 61 aa6.93□□□□□ -1.3
PACS1-205ENST00000527224 KRTAP10-7P60409 375 aaPredicted RBP6.93□□□□□ -1.3
PACS1-205ENST00000527224 MT1XP80297 61 aa6.91□□□□□ -1.3
PACS1-205ENST00000527224 MT2AP02795 61 aa6.9□□□□□ -1.3
PACS1-205ENST00000527224 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.31
PACS1-205ENST00000527224 KMT2DO14686 5537 aa6.81□□□□□ -1.32
PACS1-205ENST00000527224 KRTAP9-6A8MVA2 160 aa6.81□□□□□ -1.32
PACS1-205ENST00000527224 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
PACS1-205ENST00000527224 MT1BP07438 61 aa6.75□□□□□ -1.33
PACS1-205ENST00000527224 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
PACS1-205ENST00000527224 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
PACS1-205ENST00000527224 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
PACS1-205ENST00000527224 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
PACS1-205ENST00000527224 KRTAP2-1Q9BYU5 128 aa6.61□□□□□ -1.35
PACS1-205ENST00000527224 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
PACS1-205ENST00000527224 USH2AO75445 5202 aa6.55□□□□□ -1.36
PACS1-205ENST00000527224 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
PACS1-205ENST00000527224 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
PACS1-205ENST00000527224 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
PACS1-205ENST00000527224 LCE2BO14633 110 aa6.38□□□□□ -1.39
PACS1-205ENST00000527224 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
PACS1-205ENST00000527224 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
PACS1-205ENST00000527224 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
PACS1-205ENST00000527224 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.43
PACS1-205ENST00000527224 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
PACS1-205ENST00000527224 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
PACS1-205ENST00000527224 MT1LQ93083 61 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms