RNA–Protein interactions for RNA: ENST00000527178.1

NDUFS3-205, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 269 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-205ENST00000527178 VPS13BQ7Z7G8 4022 aa4.15□□□□□ -1.75
NDUFS3-205ENST00000527178 DNAH5Q8TE73 4624 aa4.15□□□□□ -1.75
NDUFS3-205ENST00000527178 XP32Q5T750 250 aa4.12□□□□□ -1.75
NDUFS3-205ENST00000527178 SMR3BP02814 79 aaPredicted RBP4.11□□□□□ -1.75
NDUFS3-205ENST00000527178 FLG2Q5D862 2391 aaPredicted RBP4.09□□□□□ -1.75
NDUFS3-205ENST00000527178 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
NDUFS3-205ENST00000527178 PKD1P98161 4303 aa4.09□□□□□ -1.75
NDUFS3-205ENST00000527178 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
NDUFS3-205ENST00000527178 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
NDUFS3-205ENST00000527178 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
NDUFS3-205ENST00000527178 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
NDUFS3-205ENST00000527178 A0A0D9SG42 100 aa4.06□□□□□ -1.76
NDUFS3-205ENST00000527178 P0C880 135 aa4.06□□□□□ -1.76
NDUFS3-205ENST00000527178 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
NDUFS3-205ENST00000527178 KIAA1109Q2LD37 5005 aa4.06□□□□□ -1.76
NDUFS3-205ENST00000527178 FAT2Q9NYQ8 4349 aa4.05□□□□□ -1.76
NDUFS3-205ENST00000527178 HERC2O95714 4834 aa4.05□□□□□ -1.76
NDUFS3-205ENST00000527178 DMBT1Q9UGM3 2413 aaPredicted RBP4.04□□□□□ -1.76
NDUFS3-205ENST00000527178 PKHD1P08F94 4074 aa4.03□□□□□ -1.76
NDUFS3-205ENST00000527178 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
NDUFS3-205ENST00000527178 PCLOQ9Y6V0 5065 aa4□□□□□ -1.77
NDUFS3-205ENST00000527178 DYNC1H1Q14204 4646 aaKnown RBP4□□□□□ -1.77
NDUFS3-205ENST00000527178 KRTAP17-1Q9BYP8 105 aa4□□□□□ -1.77
NDUFS3-205ENST00000527178 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
NDUFS3-205ENST00000527178 RYR1P21817 5038 aa3.98□□□□□ -1.77
NDUFS3-205ENST00000527178 Q5VSD8 79 aa3.98□□□□□ -1.77
NDUFS3-205ENST00000527178 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
NDUFS3-205ENST00000527178 R4GN34 69 aa3.97□□□□□ -1.77
NDUFS3-205ENST00000527178 APOBP04114 4563 aaKnown RBP3.96□□□□□ -1.78
NDUFS3-205ENST00000527178 HSPG2P98160 4391 aa3.94□□□□□ -1.78
NDUFS3-205ENST00000527178 KRTAP4-5Q9BYR2 181 aa3.94□□□□□ -1.78
NDUFS3-205ENST00000527178 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
NDUFS3-205ENST00000527178 ABCA13Q86UQ4 5058 aa3.92□□□□□ -1.78
NDUFS3-205ENST00000527178 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
NDUFS3-205ENST00000527178 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
NDUFS3-205ENST00000527178 MT1HL1P0DM35 61 aa3.89□□□□□ -1.79
NDUFS3-205ENST00000527178 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
NDUFS3-205ENST00000527178 TNXBP22105 4242 aa3.87□□□□□ -1.79
NDUFS3-205ENST00000527178 J3QL48 77 aa3.87□□□□□ -1.79
NDUFS3-205ENST00000527178 FAT1Q14517 4588 aa3.86□□□□□ -1.79
NDUFS3-205ENST00000527178 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
NDUFS3-205ENST00000527178 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
NDUFS3-205ENST00000527178 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
NDUFS3-205ENST00000527178 HERC1Q15751 4861 aa3.8□□□□□ -1.8
NDUFS3-205ENST00000527178 MYCBP2O75592 4640 aa3.77□□□□□ -1.81
NDUFS3-205ENST00000527178 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
NDUFS3-205ENST00000527178 TNP1P09430 55 aa3.76□□□□□ -1.81
NDUFS3-205ENST00000527178 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
NDUFS3-205ENST00000527178 HMCN2Q8NDA2 5059 aa3.64□□□□□ -1.83
NDUFS3-205ENST00000527178 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
NDUFS3-205ENST00000527178 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
NDUFS3-205ENST00000527178 LORP23490 312 aaPredicted RBP3.57□□□□□ -1.84
NDUFS3-205ENST00000527178 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
NDUFS3-205ENST00000527178 INE1O15225 51 aa3.53□□□□□ -1.84
NDUFS3-205ENST00000527178 LRP2P98164 4655 aa3.52□□□□□ -1.85
NDUFS3-205ENST00000527178 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
NDUFS3-205ENST00000527178 KRTAP4-1Q9BYQ7 146 aa3.49□□□□□ -1.85
NDUFS3-205ENST00000527178 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
NDUFS3-205ENST00000527178 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
NDUFS3-205ENST00000527178 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
NDUFS3-205ENST00000527178 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
NDUFS3-205ENST00000527178 FLGP20930 4061 aaPredicted RBP3.41□□□□□ -1.86
NDUFS3-205ENST00000527178 LPAP08519 4548 aa3.4□□□□□ -1.87
NDUFS3-205ENST00000527178 MUC2Q02817 5179 aa3.38□□□□□ -1.87
NDUFS3-205ENST00000527178 KRTAP19-8Q3LI54 63 aa3.37□□□□□ -1.87
NDUFS3-205ENST00000527178 KRTAP19-1Q8IUB9 90 aa3.35□□□□□ -1.87
NDUFS3-205ENST00000527178 LCE2CQ5TA81 110 aa3.3□□□□□ -1.88
NDUFS3-205ENST00000527178 M0R2T5 61 aa3.29□□□□□ -1.88
NDUFS3-205ENST00000527178 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
NDUFS3-205ENST00000527178 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
NDUFS3-205ENST00000527178 KRTAP10-10P60014 251 aa3.25□□□□□ -1.89
NDUFS3-205ENST00000527178 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
NDUFS3-205ENST00000527178 LCE2AQ5TA79 106 aaPredicted RBP3.24□□□□□ -1.89
NDUFS3-205ENST00000527178 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
NDUFS3-205ENST00000527178 MT1HP80294 61 aa3.22□□□□□ -1.89
NDUFS3-205ENST00000527178 KRTAP9-2Q9BYQ4 174 aa3.21□□□□□ -1.9
NDUFS3-205ENST00000527178 MT2AP02795 61 aa3.2□□□□□ -1.9
NDUFS3-205ENST00000527178 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
NDUFS3-205ENST00000527178 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
NDUFS3-205ENST00000527178 MT1XP80297 61 aa3.16□□□□□ -1.9
NDUFS3-205ENST00000527178 MT1FP04733 61 aa3.15□□□□□ -1.91
NDUFS3-205ENST00000527178 MT1BP07438 61 aa3.14□□□□□ -1.91
NDUFS3-205ENST00000527178 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
NDUFS3-205ENST00000527178 LCE2DQ5TA82 110 aaPredicted RBP3.12□□□□□ -1.91
NDUFS3-205ENST00000527178 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
NDUFS3-205ENST00000527178 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
NDUFS3-205ENST00000527178 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
NDUFS3-205ENST00000527178 CRCT1Q9UGL9 99 aa3.06□□□□□ -1.92
NDUFS3-205ENST00000527178 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
NDUFS3-205ENST00000527178 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
NDUFS3-205ENST00000527178 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
NDUFS3-205ENST00000527178 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
NDUFS3-205ENST00000527178 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
NDUFS3-205ENST00000527178 USH2AO75445 5202 aa2.89□□□□□ -1.95
NDUFS3-205ENST00000527178 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
NDUFS3-205ENST00000527178 MT1EP04732 61 aa2.85□□□□□ -1.95
NDUFS3-205ENST00000527178 LCE2BO14633 110 aa2.82□□□□□ -1.96
NDUFS3-205ENST00000527178 MT1LQ93083 61 aa2.82□□□□□ -1.96
NDUFS3-205ENST00000527178 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
NDUFS3-205ENST00000527178 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms