RNA–Protein interactions for RNA: ENST00000527028.5

PDZD3-206, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,522 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-206ENST00000527028 RYR3Q15413 4870 aa9.59□□□□□ -0.88
PDZD3-206ENST00000527028 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
PDZD3-206ENST00000527028 CRIPTQ9P021 101 aa9.58□□□□□ -0.88
PDZD3-206ENST00000527028 FAT1Q14517 4588 aa9.55□□□□□ -0.88
PDZD3-206ENST00000527028 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
PDZD3-206ENST00000527028 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
PDZD3-206ENST00000527028 S4R3F8 94 aa9.46□□□□□ -0.9
PDZD3-206ENST00000527028 FAT3Q8TDW7 4589 aa9.42□□□□□ -0.9
PDZD3-206ENST00000527028 A0A0D9SG42 100 aa9.4□□□□□ -0.91
PDZD3-206ENST00000527028 KRTAP10-8P60410 259 aa9.4□□□□□ -0.91
PDZD3-206ENST00000527028 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
PDZD3-206ENST00000527028 XP32Q5T750 250 aa9.37□□□□□ -0.91
PDZD3-206ENST00000527028 P0C880 135 aa9.36□□□□□ -0.91
PDZD3-206ENST00000527028 TNXBP22105 4242 aa9.34□□□□□ -0.91
PDZD3-206ENST00000527028 TPRXLQ17RH7 258 aa9.34□□□□□ -0.91
PDZD3-206ENST00000527028 LRP1Q07954 4544 aaKnown RBP9.31□□□□□ -0.92
PDZD3-206ENST00000527028 HSPG2P98160 4391 aa9.26□□□□□ -0.93
PDZD3-206ENST00000527028 EPPK1P58107 5090 aaKnown RBP9.25□□□□□ -0.93
PDZD3-206ENST00000527028 KIAA1109Q2LD37 5005 aa9.23□□□□□ -0.93
PDZD3-206ENST00000527028 KRTAP12-2P59991 146 aa9.22□□□□□ -0.93
PDZD3-206ENST00000527028 SPINT4Q6UDR6 99 aa9.22□□□□□ -0.93
PDZD3-206ENST00000527028 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
PDZD3-206ENST00000527028 C10orf95Q9H7T3 257 aa9.17□□□□□ -0.94
PDZD3-206ENST00000527028 Q5VSD8 79 aa9.17□□□□□ -0.94
PDZD3-206ENST00000527028 RYR1P21817 5038 aa9.16□□□□□ -0.94
PDZD3-206ENST00000527028 KRTAP17-1Q9BYP8 105 aa9.16□□□□□ -0.94
PDZD3-206ENST00000527028 M0QZ58 72 aa9.13□□□□□ -0.95
PDZD3-206ENST00000527028 KRTAP15-1Q3LI76 137 aa9.08□□□□□ -0.96
PDZD3-206ENST00000527028 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
PDZD3-206ENST00000527028 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
PDZD3-206ENST00000527028 NDUFAF8A1L188 74 aa8.95□□□□□ -0.98
PDZD3-206ENST00000527028 A0A0A0MQY5 61 aa8.84□□□□□ -0.99
PDZD3-206ENST00000527028 KRTAP4-5Q9BYR2 181 aa8.83□□□□□ -1
PDZD3-206ENST00000527028 LPAP08519 4548 aa8.83□□□□□ -1
PDZD3-206ENST00000527028 R4GN34 69 aa8.78□□□□□ -1
PDZD3-206ENST00000527028 LRP2P98164 4655 aa8.78□□□□□ -1
PDZD3-206ENST00000527028 BIRC6Q9NR09 4857 aa8.76□□□□□ -1.01
PDZD3-206ENST00000527028 ABCA13Q86UQ4 5058 aa8.75□□□□□ -1.01
PDZD3-206ENST00000527028 HERC2O95714 4834 aa8.63□□□□□ -1.03
PDZD3-206ENST00000527028 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.03
PDZD3-206ENST00000527028 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
PDZD3-206ENST00000527028 LORP23490 312 aaPredicted RBP8.55□□□□□ -1.04
PDZD3-206ENST00000527028 PP632Q6XCG6 107 aa8.49□□□□□ -1.05
PDZD3-206ENST00000527028 MUC17Q685J3 4493 aa8.48□□□□□ -1.05
PDZD3-206ENST00000527028 PCLOQ9Y6V0 5065 aa8.45□□□□□ -1.06
PDZD3-206ENST00000527028 KRTAP4-1Q9BYQ7 146 aa8.4□□□□□ -1.07
PDZD3-206ENST00000527028 J3QL48 77 aa8.38□□□□□ -1.07
PDZD3-206ENST00000527028 KRTAP19-2Q3LHN2 52 aa8.37□□□□□ -1.07
PDZD3-206ENST00000527028 CAMK2N1Q7Z7J9 78 aa8.35□□□□□ -1.07
PDZD3-206ENST00000527028 HERC1Q15751 4861 aa8.34□□□□□ -1.07
PDZD3-206ENST00000527028 LUZP6Q538Z0 58 aa8.25□□□□□ -1.09
PDZD3-206ENST00000527028 KRTAP23-1A1A580 65 aa8.2□□□□□ -1.1
PDZD3-206ENST00000527028 MUC2Q02817 5179 aa8.15□□□□□ -1.1
PDZD3-206ENST00000527028 TNP1P09430 55 aa8.12□□□□□ -1.11
PDZD3-206ENST00000527028 HMCN2Q8NDA2 5059 aa8.09□□□□□ -1.11
PDZD3-206ENST00000527028 FLGP20930 4061 aaPredicted RBP8.07□□□□□ -1.12
PDZD3-206ENST00000527028 SPRR5A0A1B0GTR4 108 aa8.01□□□□□ -1.13
PDZD3-206ENST00000527028 UBR4Q5T4S7 5183 aa7.88□□□□□ -1.15
PDZD3-206ENST00000527028 RNF213Q63HN8 5207 aa7.85□□□□□ -1.15
PDZD3-206ENST00000527028 SPRR2GQ9BYE4 73 aa7.84□□□□□ -1.15
PDZD3-206ENST00000527028 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
PDZD3-206ENST00000527028 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
PDZD3-206ENST00000527028 LCE2CQ5TA81 110 aa7.72□□□□□ -1.17
PDZD3-206ENST00000527028 LCE3AQ5TA76 89 aa7.61□□□□□ -1.19
PDZD3-206ENST00000527028 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
PDZD3-206ENST00000527028 M0R2T5 61 aa7.5□□□□□ -1.21
PDZD3-206ENST00000527028 MT1HP80294 61 aa7.48□□□□□ -1.21
PDZD3-206ENST00000527028 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
PDZD3-206ENST00000527028 MT2AP02795 61 aa7.44□□□□□ -1.22
PDZD3-206ENST00000527028 MT1FP04733 61 aa7.44□□□□□ -1.22
PDZD3-206ENST00000527028 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
PDZD3-206ENST00000527028 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
PDZD3-206ENST00000527028 KRTAP10-5P60370 271 aa7.32□□□□□ -1.24
PDZD3-206ENST00000527028 MT1XP80297 61 aa7.3□□□□□ -1.24
PDZD3-206ENST00000527028 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
PDZD3-206ENST00000527028 MT1BP07438 61 aa7.29□□□□□ -1.24
PDZD3-206ENST00000527028 INE1O15225 51 aa7.28□□□□□ -1.24
PDZD3-206ENST00000527028 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
PDZD3-206ENST00000527028 KRTAP10-12P60413 245 aa7.26□□□□□ -1.25
PDZD3-206ENST00000527028 KRTAP10-7P60409 375 aaPredicted RBP7.08□□□□□ -1.28
PDZD3-206ENST00000527028 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
PDZD3-206ENST00000527028 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
PDZD3-206ENST00000527028 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
PDZD3-206ENST00000527028 KRTAP19-5Q3LI72 72 aa6.84□□□□□ -1.31
PDZD3-206ENST00000527028 USH2AO75445 5202 aa6.8□□□□□ -1.32
PDZD3-206ENST00000527028 LCE2BO14633 110 aa6.69□□□□□ -1.34
PDZD3-206ENST00000527028 KRTAP9-6A8MVA2 160 aa6.59□□□□□ -1.35
PDZD3-206ENST00000527028 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
PDZD3-206ENST00000527028 KRTAP2-3P0C7H8 128 aa6.54□□□□□ -1.36
PDZD3-206ENST00000527028 KRTAP2-4Q9BYR9 128 aa6.54□□□□□ -1.36
PDZD3-206ENST00000527028 KRTAP2-1Q9BYU5 128 aa6.54□□□□□ -1.36
PDZD3-206ENST00000527028 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
PDZD3-206ENST00000527028 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
PDZD3-206ENST00000527028 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
PDZD3-206ENST00000527028 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
PDZD3-206ENST00000527028 KRTAP19-7Q3SYF9 63 aa6.5□□□□□ -1.37
PDZD3-206ENST00000527028 KMT2DO14686 5537 aa6.46□□□□□ -1.38
PDZD3-206ENST00000527028 LCE2DQ5TA82 110 aaPredicted RBP6.41□□□□□ -1.38
PDZD3-206ENST00000527028 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
PDZD3-206ENST00000527028 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms