RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 RYR1P21817 5038 aa4.57□□□□□ -1.68
CTNND1-215ENST00000526938 UQCR11O14957 56 aa4.57□□□□□ -1.68
CTNND1-215ENST00000526938 ROMO1P60602 79 aa4.57□□□□□ -1.68
CTNND1-215ENST00000526938 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
CTNND1-215ENST00000526938 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
CTNND1-215ENST00000526938 XP32Q5T750 250 aa4.55□□□□□ -1.68
CTNND1-215ENST00000526938 COX6B2Q6YFQ2 88 aa4.54□□□□□ -1.68
CTNND1-215ENST00000526938 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
CTNND1-215ENST00000526938 HSPG2P98160 4391 aa4.53□□□□□ -1.68
CTNND1-215ENST00000526938 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
CTNND1-215ENST00000526938 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
CTNND1-215ENST00000526938 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
CTNND1-215ENST00000526938 MT1HL1P0DM35 61 aa4.51□□□□□ -1.69
CTNND1-215ENST00000526938 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
CTNND1-215ENST00000526938 EPPK1P58107 5090 aaKnown RBP4.49□□□□□ -1.69
CTNND1-215ENST00000526938 A0A1B0GU33 70 aa4.48□□□□□ -1.69
CTNND1-215ENST00000526938 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
CTNND1-215ENST00000526938 SPATA8Q6RVD6 105 aa4.47□□□□□ -1.69
CTNND1-215ENST00000526938 LCE2BO14633 110 aa4.45□□□□□ -1.7
CTNND1-215ENST00000526938 A0A0D9SG42 100 aa4.45□□□□□ -1.7
CTNND1-215ENST00000526938 S4R3F8 94 aa4.44□□□□□ -1.7
CTNND1-215ENST00000526938 LRP2P98164 4655 aa4.4□□□□□ -1.7
CTNND1-215ENST00000526938 TNXBP22105 4242 aa4.4□□□□□ -1.7
CTNND1-215ENST00000526938 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.7
CTNND1-215ENST00000526938 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
CTNND1-215ENST00000526938 K7ERS5 55 aa4.38□□□□□ -1.71
CTNND1-215ENST00000526938 TPRXLQ17RH7 258 aa4.37□□□□□ -1.71
CTNND1-215ENST00000526938 H0YAA0 97 aa4.37□□□□□ -1.71
CTNND1-215ENST00000526938 LPAP08519 4548 aa4.36□□□□□ -1.71
CTNND1-215ENST00000526938 SEC61BP60468 96 aaKnown RBP4.33□□□□□ -1.72
CTNND1-215ENST00000526938 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
CTNND1-215ENST00000526938 HERC2O95714 4834 aa4.31□□□□□ -1.72
CTNND1-215ENST00000526938 ABCA13Q86UQ4 5058 aa4.31□□□□□ -1.72
CTNND1-215ENST00000526938 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
CTNND1-215ENST00000526938 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
CTNND1-215ENST00000526938 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
CTNND1-215ENST00000526938 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
CTNND1-215ENST00000526938 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
CTNND1-215ENST00000526938 LORP23490 312 aaPredicted RBP4.24□□□□□ -1.73
CTNND1-215ENST00000526938 M0QZ58 72 aa4.21□□□□□ -1.74
CTNND1-215ENST00000526938 R4GN34 69 aa4.2□□□□□ -1.74
CTNND1-215ENST00000526938 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
CTNND1-215ENST00000526938 MUC2Q02817 5179 aa4.18□□□□□ -1.74
CTNND1-215ENST00000526938 BIRC6Q9NR09 4857 aa4.13□□□□□ -1.75
CTNND1-215ENST00000526938 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
CTNND1-215ENST00000526938 KRTAP12-2P59991 146 aa4.12□□□□□ -1.75
CTNND1-215ENST00000526938 HERC1Q15751 4861 aa4.12□□□□□ -1.75
CTNND1-215ENST00000526938 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
CTNND1-215ENST00000526938 M0R2T5 61 aa4.11□□□□□ -1.75
CTNND1-215ENST00000526938 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
CTNND1-215ENST00000526938 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
CTNND1-215ENST00000526938 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
CTNND1-215ENST00000526938 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
CTNND1-215ENST00000526938 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
CTNND1-215ENST00000526938 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
CTNND1-215ENST00000526938 MUC17Q685J3 4493 aa3.96□□□□□ -1.78
CTNND1-215ENST00000526938 UBR4Q5T4S7 5183 aa3.92□□□□□ -1.78
CTNND1-215ENST00000526938 KRTAP19-2Q3LHN2 52 aa3.92□□□□□ -1.78
CTNND1-215ENST00000526938 HMCN2Q8NDA2 5059 aa3.92□□□□□ -1.78
CTNND1-215ENST00000526938 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
CTNND1-215ENST00000526938 PLAC4Q8WY50 150 aa3.84□□□□□ -1.8
CTNND1-215ENST00000526938 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
CTNND1-215ENST00000526938 MT1HP80294 61 aa3.8□□□□□ -1.8
CTNND1-215ENST00000526938 TNP1P09430 55 aa3.76□□□□□ -1.81
CTNND1-215ENST00000526938 MT1FP04733 61 aa3.72□□□□□ -1.81
CTNND1-215ENST00000526938 MT2AP02795 61 aa3.71□□□□□ -1.82
CTNND1-215ENST00000526938 KRTAP19-1Q8IUB9 90 aa3.69□□□□□ -1.82
CTNND1-215ENST00000526938 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.82
CTNND1-215ENST00000526938 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
CTNND1-215ENST00000526938 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
CTNND1-215ENST00000526938 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
CTNND1-215ENST00000526938 USH2AO75445 5202 aa3.54□□□□□ -1.84
CTNND1-215ENST00000526938 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
CTNND1-215ENST00000526938 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
CTNND1-215ENST00000526938 MT1BP07438 61 aa3.51□□□□□ -1.85
CTNND1-215ENST00000526938 KRTAP9-3Q9BYQ3 159 aa3.5□□□□□ -1.85
CTNND1-215ENST00000526938 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
CTNND1-215ENST00000526938 MT1XP80297 61 aa3.46□□□□□ -1.86
CTNND1-215ENST00000526938 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
CTNND1-215ENST00000526938 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
CTNND1-215ENST00000526938 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
CTNND1-215ENST00000526938 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
CTNND1-215ENST00000526938 KMT2DO14686 5537 aa3.38□□□□□ -1.87
CTNND1-215ENST00000526938 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
CTNND1-215ENST00000526938 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
CTNND1-215ENST00000526938 KRTAP4-8A0A0G2JLE6 195 aa3.32□□□□□ -1.88
CTNND1-215ENST00000526938 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
CTNND1-215ENST00000526938 INE1O15225 51 aa3.31□□□□□ -1.88
CTNND1-215ENST00000526938 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
CTNND1-215ENST00000526938 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
CTNND1-215ENST00000526938 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
CTNND1-215ENST00000526938 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
CTNND1-215ENST00000526938 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.9
CTNND1-215ENST00000526938 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
CTNND1-215ENST00000526938 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
CTNND1-215ENST00000526938 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
CTNND1-215ENST00000526938 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
CTNND1-215ENST00000526938 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
CTNND1-215ENST00000526938 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
CTNND1-215ENST00000526938 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms