RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 H0YAA0 97 aa1.44□□□□□ -2.18
CTR9-203ENST00000526874 PRH1P02810 166 aa1.44□□□□□ -2.18
CTR9-203ENST00000526874 DEFB105AQ8NG35 78 aa1.44□□□□□ -2.18
CTR9-203ENST00000526874 CMYA5Q8N3K9 4069 aa1.44□□□□□ -2.18
CTR9-203ENST00000526874 DEFB108AA8MXU0 73 aa1.43□□□□□ -2.18
CTR9-203ENST00000526874 SERF2P84101 59 aa1.43□□□□□ -2.18
CTR9-203ENST00000526874 ALMS1Q8TCU4 4167 aa1.43□□□□□ -2.18
CTR9-203ENST00000526874 DNAH1Q9P2D7 4330 aa1.43□□□□□ -2.18
CTR9-203ENST00000526874 HECTD4Q9Y4D8 3996 aa1.42□□□□□ -2.18
CTR9-203ENST00000526874 KLK9Q2XQG4 91 aa1.42□□□□□ -2.18
CTR9-203ENST00000526874 CMC2Q9NRP2 79 aa1.42□□□□□ -2.18
CTR9-203ENST00000526874 CRCT1Q9UGL9 99 aa1.42□□□□□ -2.18
CTR9-203ENST00000526874 LINC00158P58513 81 aa1.41□□□□□ -2.18
CTR9-203ENST00000526874 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
CTR9-203ENST00000526874 PLNP26678 52 aa1.4□□□□□ -2.19
CTR9-203ENST00000526874 LYNX1G3V0Z9 82 aa1.39□□□□□ -2.19
CTR9-203ENST00000526874 WFDC13Q8IUB5 93 aa1.39□□□□□ -2.19
CTR9-203ENST00000526874 TOMM5Q8N4H5 51 aa1.39□□□□□ -2.19
CTR9-203ENST00000526874 FAT4Q6V0I7 4981 aa1.38□□□□□ -2.19
CTR9-203ENST00000526874 FRAS1Q86XX4 4008 aa1.38□□□□□ -2.19
CTR9-203ENST00000526874 KMT2AQ03164 3969 aa1.38□□□□□ -2.19
CTR9-203ENST00000526874 RPS27P42677 84 aaKnown RBP1.36□□□□□ -2.19
CTR9-203ENST00000526874 DEFB108BQ8NET1 73 aa1.36□□□□□ -2.19
CTR9-203ENST00000526874 TTTY10Q9BZA0 68 aa1.35□□□□□ -2.19
CTR9-203ENST00000526874 ABRACLQ9P1F3 81 aa1.35□□□□□ -2.19
CTR9-203ENST00000526874 CSMD3Q7Z407 3707 aa1.35□□□□□ -2.19
CTR9-203ENST00000526874 SMIM27A0A1W2PRY6 76 aa1.34□□□□□ -2.19
CTR9-203ENST00000526874 H3BSH0 61 aa1.34□□□□□ -2.19
CTR9-203ENST00000526874 LINC01590Q5TEZ4 76 aa1.34□□□□□ -2.19
CTR9-203ENST00000526874 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
CTR9-203ENST00000526874 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.2
CTR9-203ENST00000526874 PKHD1P08F94 4074 aa1.33□□□□□ -2.2
CTR9-203ENST00000526874 LYSTQ99698 3801 aa1.33□□□□□ -2.2
CTR9-203ENST00000526874 NEBP20929 6669 aa1.33□□□□□ -2.2
CTR9-203ENST00000526874 SNRPGP62308 76 aaKnown RBP1.32□□□□□ -2.2
CTR9-203ENST00000526874 KAAG1Q9UBP8 84 aa1.32□□□□□ -2.2
CTR9-203ENST00000526874 DNAH10Q8IVF4 4471 aa1.32□□□□□ -2.2
CTR9-203ENST00000526874 HRNRQ86YZ3 2850 aaPredicted RBP1.32□□□□□ -2.2
CTR9-203ENST00000526874 DNAH9Q9NYC9 4486 aa1.31□□□□□ -2.2
CTR9-203ENST00000526874 H0YGX0 51 aa1.31□□□□□ -2.2
CTR9-203ENST00000526874 H3BUX3 64 aa1.31□□□□□ -2.2
CTR9-203ENST00000526874 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
CTR9-203ENST00000526874 PLECQ15149 4684 aaKnown RBP1.3□□□□□ -2.2
CTR9-203ENST00000526874 LINC01546A6NGU7 62 aa1.3□□□□□ -2.2
CTR9-203ENST00000526874 DEFB130BP0DP73 79 aa1.3□□□□□ -2.2
CTR9-203ENST00000526874 DEFB130AP0DP74 79 aa1.3□□□□□ -2.2
CTR9-203ENST00000526874 MINOS1Q5TGZ0 78 aa1.3□□□□□ -2.2
CTR9-203ENST00000526874 LEAP2Q969E1 77 aa1.3□□□□□ -2.2
CTR9-203ENST00000526874 TIMM8BQ9Y5J9 83 aaPredicted RBP1.3□□□□□ -2.2
CTR9-203ENST00000526874 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
CTR9-203ENST00000526874 DYNC1H1Q14204 4646 aaKnown RBP1.29□□□□□ -2.2
CTR9-203ENST00000526874 IAPPP10997 89 aa1.29□□□□□ -2.2
CTR9-203ENST00000526874 HSPG2P98160 4391 aa1.28□□□□□ -2.2
CTR9-203ENST00000526874 LINC00308Q8TCZ7 52 aa1.28□□□□□ -2.2
CTR9-203ENST00000526874 DNAH7Q8WXX0 4024 aa1.28□□□□□ -2.2
CTR9-203ENST00000526874 MACF1Q9UPN3 7388 aaKnown RBP1.27□□□□□ -2.21
CTR9-203ENST00000526874 DEFB136Q30KP8 78 aa1.27□□□□□ -2.21
CTR9-203ENST00000526874 RPL39P5Q59GN2 51 aa1.27□□□□□ -2.21
CTR9-203ENST00000526874 ARHGAP5-AS1Q96IT6 56 aa1.27□□□□□ -2.21
CTR9-203ENST00000526874 SPINK4O60575 86 aa1.26□□□□□ -2.21
CTR9-203ENST00000526874 APELAP0DMC3 54 aa1.26□□□□□ -2.21
CTR9-203ENST00000526874 MYCBP2O75592 4640 aa1.26□□□□□ -2.21
CTR9-203ENST00000526874 TMEM167BQ9NRX6 74 aa1.25□□□□□ -2.21
CTR9-203ENST00000526874 C6orf48Q9UBA6 75 aa1.25□□□□□ -2.21
CTR9-203ENST00000526874 PKHD1L1Q86WI1 4243 aa1.25□□□□□ -2.21
CTR9-203ENST00000526874 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
CTR9-203ENST00000526874 FAT2Q9NYQ8 4349 aa1.24□□□□□ -2.21
CTR9-203ENST00000526874 H3BUA1 57 aa1.23□□□□□ -2.21
CTR9-203ENST00000526874 FAT1Q14517 4588 aa1.23□□□□□ -2.21
CTR9-203ENST00000526874 HUWE1Q7Z6Z7 4374 aaKnown RBP1.23□□□□□ -2.21
CTR9-203ENST00000526874 STARD9Q9P2P6 4700 aa1.22□□□□□ -2.21
CTR9-203ENST00000526874 LRP2P98164 4655 aa1.22□□□□□ -2.21
CTR9-203ENST00000526874 WT1-ASQ06250 92 aa1.22□□□□□ -2.21
CTR9-203ENST00000526874 TMEM167AQ8TBQ9 72 aa1.22□□□□□ -2.21
CTR9-203ENST00000526874 DNAH3Q8TD57 4116 aa1.22□□□□□ -2.21
CTR9-203ENST00000526874 DNAH11Q96DT5 4516 aa1.21□□□□□ -2.22
CTR9-203ENST00000526874 RHPN1-AS1Q9BWJ2 59 aa1.21□□□□□ -2.22
CTR9-203ENST00000526874 SSPOA2VEC9 5147 aa1.21□□□□□ -2.22
CTR9-203ENST00000526874 K7EIM0 57 aa1.2□□□□□ -2.22
CTR9-203ENST00000526874 PRCDQ00LT1 54 aa1.2□□□□□ -2.22
CTR9-203ENST00000526874 DEFB135Q30KP9 77 aa1.2□□□□□ -2.22
CTR9-203ENST00000526874 KRTAP20-1Q3LI63 56 aa1.2□□□□□ -2.22
CTR9-203ENST00000526874 PKD1P98161 4303 aa1.2□□□□□ -2.22
CTR9-203ENST00000526874 DEFB4AO15263 64 aa1.19□□□□□ -2.22
CTR9-203ENST00000526874 DEFB131AP59861 70 aa1.19□□□□□ -2.22
CTR9-203ENST00000526874 VPS13DQ5THJ4 4388 aa1.19□□□□□ -2.22
CTR9-203ENST00000526874 KMT2DO14686 5537 aa1.19□□□□□ -2.22
CTR9-203ENST00000526874 DNAH6Q9C0G6 4158 aa1.19□□□□□ -2.22
CTR9-203ENST00000526874 FAT3Q8TDW7 4589 aa1.18□□□□□ -2.22
CTR9-203ENST00000526874 KRTAP2-3P0C7H8 128 aa1.18□□□□□ -2.22
CTR9-203ENST00000526874 DEFB1P60022 68 aa1.18□□□□□ -2.22
CTR9-203ENST00000526874 KRTAP19-3Q7Z4W3 81 aa1.18□□□□□ -2.22
CTR9-203ENST00000526874 KRTAP2-4Q9BYR9 128 aa1.18□□□□□ -2.22
CTR9-203ENST00000526874 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
CTR9-203ENST00000526874 APOBP04114 4563 aaKnown RBP1.18□□□□□ -2.22
CTR9-203ENST00000526874 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
CTR9-203ENST00000526874 HTN1P15515 57 aa1.17□□□□□ -2.22
CTR9-203ENST00000526874 HTN3P15516 51 aa1.17□□□□□ -2.22
CTR9-203ENST00000526874 VPS13BQ7Z7G8 4022 aa1.17□□□□□ -2.22
CTR9-203ENST00000526874 SPART-AS1P0CW21 52 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms