RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
USP35-201ENST00000526425 RYR2Q92736 4967 aa5.36□□□□□ -1.55
USP35-201ENST00000526425 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
USP35-201ENST00000526425 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
USP35-201ENST00000526425 KRTAP10-4P60372 401 aaPredicted RBP5.33□□□□□ -1.56
USP35-201ENST00000526425 VPS13BQ7Z7G8 4022 aa5.33□□□□□ -1.56
USP35-201ENST00000526425 PKD1P98161 4303 aa5.33□□□□□ -1.56
USP35-201ENST00000526425 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
USP35-201ENST00000526425 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
USP35-201ENST00000526425 APOBP04114 4563 aaKnown RBP5.24□□□□□ -1.57
USP35-201ENST00000526425 KRTAP10-8P60410 259 aa5.24□□□□□ -1.57
USP35-201ENST00000526425 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
USP35-201ENST00000526425 KIAA1109Q2LD37 5005 aa5.22□□□□□ -1.57
USP35-201ENST00000526425 RYR3Q15413 4870 aa5.22□□□□□ -1.57
USP35-201ENST00000526425 LRP1Q07954 4544 aaKnown RBP5.16□□□□□ -1.58
USP35-201ENST00000526425 MYCBP2O75592 4640 aa5.16□□□□□ -1.58
USP35-201ENST00000526425 RYR1P21817 5038 aa5.13□□□□□ -1.59
USP35-201ENST00000526425 XP32Q5T750 250 aa5.13□□□□□ -1.59
USP35-201ENST00000526425 MT1HL1P0DM35 61 aa5.12□□□□□ -1.59
USP35-201ENST00000526425 KRTAP4-5Q9BYR2 181 aa5.12□□□□□ -1.59
USP35-201ENST00000526425 HSPG2P98160 4391 aa5.11□□□□□ -1.59
USP35-201ENST00000526425 S4R3F8 94 aa5.1□□□□□ -1.59
USP35-201ENST00000526425 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
USP35-201ENST00000526425 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
USP35-201ENST00000526425 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
USP35-201ENST00000526425 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
USP35-201ENST00000526425 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
USP35-201ENST00000526425 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
USP35-201ENST00000526425 CAMK2N1Q7Z7J9 78 aa4.98□□□□□ -1.61
USP35-201ENST00000526425 KRTAP12-2P59991 146 aa4.95□□□□□ -1.62
USP35-201ENST00000526425 PKHD1L1Q86WI1 4243 aa4.93□□□□□ -1.62
USP35-201ENST00000526425 HERC2O95714 4834 aa4.91□□□□□ -1.62
USP35-201ENST00000526425 TNXBP22105 4242 aa4.89□□□□□ -1.63
USP35-201ENST00000526425 BIRC6Q9NR09 4857 aa4.87□□□□□ -1.63
USP35-201ENST00000526425 M0QZ58 72 aa4.86□□□□□ -1.63
USP35-201ENST00000526425 R4GN34 69 aa4.86□□□□□ -1.63
USP35-201ENST00000526425 LRP2P98164 4655 aa4.86□□□□□ -1.63
USP35-201ENST00000526425 ABCA13Q86UQ4 5058 aa4.83□□□□□ -1.64
USP35-201ENST00000526425 KRTAP3-3Q9BYR6 98 aa4.82□□□□□ -1.64
USP35-201ENST00000526425 KRTAP10-6P60371 365 aaPredicted RBP4.82□□□□□ -1.64
USP35-201ENST00000526425 M0R2T5 61 aa4.81□□□□□ -1.64
USP35-201ENST00000526425 LPAP08519 4548 aa4.79□□□□□ -1.64
USP35-201ENST00000526425 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
USP35-201ENST00000526425 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
USP35-201ENST00000526425 KRTAP4-1Q9BYQ7 146 aa4.66□□□□□ -1.66
USP35-201ENST00000526425 HERC1Q15751 4861 aa4.62□□□□□ -1.67
USP35-201ENST00000526425 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
USP35-201ENST00000526425 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
USP35-201ENST00000526425 LORP23490 312 aaPredicted RBP4.59□□□□□ -1.68
USP35-201ENST00000526425 MUC2Q02817 5179 aa4.57□□□□□ -1.68
USP35-201ENST00000526425 HMCN2Q8NDA2 5059 aa4.48□□□□□ -1.69
USP35-201ENST00000526425 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
USP35-201ENST00000526425 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
USP35-201ENST00000526425 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
USP35-201ENST00000526425 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
USP35-201ENST00000526425 FAT4Q6V0I7 4981 aa4.37□□□□□ -1.71
USP35-201ENST00000526425 MUC17Q685J3 4493 aa4.37□□□□□ -1.71
USP35-201ENST00000526425 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
USP35-201ENST00000526425 TNP1P09430 55 aa4.33□□□□□ -1.72
USP35-201ENST00000526425 MT1HP80294 61 aa4.32□□□□□ -1.72
USP35-201ENST00000526425 INE1O15225 51 aa4.31□□□□□ -1.72
USP35-201ENST00000526425 LCE2CQ5TA81 110 aa4.3□□□□□ -1.72
USP35-201ENST00000526425 FLGP20930 4061 aaPredicted RBP4.28□□□□□ -1.72
USP35-201ENST00000526425 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
USP35-201ENST00000526425 MT2AP02795 61 aa4.18□□□□□ -1.74
USP35-201ENST00000526425 MT1FP04733 61 aa4.16□□□□□ -1.74
USP35-201ENST00000526425 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
USP35-201ENST00000526425 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
USP35-201ENST00000526425 KRTAP19-1Q8IUB9 90 aa4.09□□□□□ -1.75
USP35-201ENST00000526425 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
USP35-201ENST00000526425 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
USP35-201ENST00000526425 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
USP35-201ENST00000526425 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
USP35-201ENST00000526425 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.78
USP35-201ENST00000526425 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
USP35-201ENST00000526425 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
USP35-201ENST00000526425 MT1BP07438 61 aa3.91□□□□□ -1.78
USP35-201ENST00000526425 USH2AO75445 5202 aa3.89□□□□□ -1.79
USP35-201ENST00000526425 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
USP35-201ENST00000526425 LCE2BO14633 110 aa3.86□□□□□ -1.79
USP35-201ENST00000526425 MT1XP80297 61 aa3.86□□□□□ -1.79
USP35-201ENST00000526425 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
USP35-201ENST00000526425 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
USP35-201ENST00000526425 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
USP35-201ENST00000526425 KMT2DO14686 5537 aa3.75□□□□□ -1.81
USP35-201ENST00000526425 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
USP35-201ENST00000526425 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
USP35-201ENST00000526425 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
USP35-201ENST00000526425 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
USP35-201ENST00000526425 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
USP35-201ENST00000526425 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.83
USP35-201ENST00000526425 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
USP35-201ENST00000526425 LCE2DQ5TA82 110 aaPredicted RBP3.57□□□□□ -1.84
USP35-201ENST00000526425 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
USP35-201ENST00000526425 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
USP35-201ENST00000526425 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
USP35-201ENST00000526425 KRTAP9-2Q9BYQ4 174 aa3.51□□□□□ -1.85
USP35-201ENST00000526425 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
USP35-201ENST00000526425 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
USP35-201ENST00000526425 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms