RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 KRTAP15-1Q3LI76 137 aa2.49□□□□□ -2.01
HIPK3-204ENST00000525975 SACSQ9NZJ4 4579 aa2.48□□□□□ -2.01
HIPK3-204ENST00000525975 PKHD1P08F94 4074 aa2.48□□□□□ -2.01
HIPK3-204ENST00000525975 KRTAP10-1P60331 282 aa2.48□□□□□ -2.01
HIPK3-204ENST00000525975 RYR3Q15413 4870 aa2.47□□□□□ -2.01
HIPK3-204ENST00000525975 RPS29P62273 56 aaKnown RBP2.46□□□□□ -2.02
HIPK3-204ENST00000525975 KRTAP13-4Q3LI77 160 aa2.46□□□□□ -2.02
HIPK3-204ENST00000525975 S4R3F8 94 aa2.46□□□□□ -2.02
HIPK3-204ENST00000525975 DNAH11Q96DT5 4516 aa2.46□□□□□ -2.02
HIPK3-204ENST00000525975 FAT2Q9NYQ8 4349 aa2.45□□□□□ -2.02
HIPK3-204ENST00000525975 KRTAP10-6P60371 365 aaPredicted RBP2.45□□□□□ -2.02
HIPK3-204ENST00000525975 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
HIPK3-204ENST00000525975 DNAH5Q8TE73 4624 aa2.43□□□□□ -2.02
HIPK3-204ENST00000525975 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
HIPK3-204ENST00000525975 PKD1P98161 4303 aa2.41□□□□□ -2.02
HIPK3-204ENST00000525975 SMR3BP02814 79 aaPredicted RBP2.4□□□□□ -2.03
HIPK3-204ENST00000525975 RYR2Q92736 4967 aa2.39□□□□□ -2.03
HIPK3-204ENST00000525975 EPPK1P58107 5090 aaKnown RBP2.39□□□□□ -2.03
HIPK3-204ENST00000525975 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
HIPK3-204ENST00000525975 FAT1Q14517 4588 aa2.38□□□□□ -2.03
HIPK3-204ENST00000525975 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
HIPK3-204ENST00000525975 XP32Q5T750 250 aa2.37□□□□□ -2.03
HIPK3-204ENST00000525975 VPS13BQ7Z7G8 4022 aa2.36□□□□□ -2.03
HIPK3-204ENST00000525975 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
HIPK3-204ENST00000525975 DYNC1H1Q14204 4646 aaKnown RBP2.35□□□□□ -2.03
HIPK3-204ENST00000525975 M0QZ58 72 aa2.35□□□□□ -2.03
HIPK3-204ENST00000525975 APOBP04114 4563 aaKnown RBP2.34□□□□□ -2.04
HIPK3-204ENST00000525975 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
HIPK3-204ENST00000525975 KIAA1109Q2LD37 5005 aa2.33□□□□□ -2.04
HIPK3-204ENST00000525975 MYCBP2O75592 4640 aa2.31□□□□□ -2.04
HIPK3-204ENST00000525975 LRP1Q07954 4544 aaKnown RBP2.31□□□□□ -2.04
HIPK3-204ENST00000525975 R4GN34 69 aa2.3□□□□□ -2.04
HIPK3-204ENST00000525975 LOC100996750A0A140TA64 210 aa2.3□□□□□ -2.04
HIPK3-204ENST00000525975 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
HIPK3-204ENST00000525975 HSPG2P98160 4391 aa2.28□□□□□ -2.04
HIPK3-204ENST00000525975 KRTAP19-4Q3LI73 84 aa2.26□□□□□ -2.05
HIPK3-204ENST00000525975 A0A1B0GVY2 172 aa2.26□□□□□ -2.05
HIPK3-204ENST00000525975 PKHD1L1Q86WI1 4243 aa2.26□□□□□ -2.05
HIPK3-204ENST00000525975 RYR1P21817 5038 aa2.26□□□□□ -2.05
HIPK3-204ENST00000525975 KRTAP19-1Q8IUB9 90 aa2.26□□□□□ -2.05
HIPK3-204ENST00000525975 FAT3Q8TDW7 4589 aa2.25□□□□□ -2.05
HIPK3-204ENST00000525975 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
HIPK3-204ENST00000525975 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
HIPK3-204ENST00000525975 KRTAP10-4P60372 401 aaPredicted RBP2.23□□□□□ -2.05
HIPK3-204ENST00000525975 KRTAP17-1Q9BYP8 105 aa2.22□□□□□ -2.05
HIPK3-204ENST00000525975 ABCA13Q86UQ4 5058 aa2.22□□□□□ -2.05
HIPK3-204ENST00000525975 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
HIPK3-204ENST00000525975 KRTAP4-8Q9BYQ9 185 aa2.2□□□□□ -2.06
HIPK3-204ENST00000525975 HERC1Q15751 4861 aa2.2□□□□□ -2.06
HIPK3-204ENST00000525975 PCLOQ9Y6V0 5065 aa2.19□□□□□ -2.06
HIPK3-204ENST00000525975 LCE4AQ5TA78 99 aa2.19□□□□□ -2.06
HIPK3-204ENST00000525975 HERC2O95714 4834 aa2.19□□□□□ -2.06
HIPK3-204ENST00000525975 KRTAP9-6A0A140TA67 174 aa2.18□□□□□ -2.06
HIPK3-204ENST00000525975 KRTAP9-7A8MTY7 169 aa2.18□□□□□ -2.06
HIPK3-204ENST00000525975 TNXBP22105 4242 aa2.18□□□□□ -2.06
HIPK3-204ENST00000525975 Q5VSD8 79 aa2.18□□□□□ -2.06
HIPK3-204ENST00000525975 LPAP08519 4548 aa2.17□□□□□ -2.06
HIPK3-204ENST00000525975 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.17□□□□□ -2.06
HIPK3-204ENST00000525975 KRTAP9-2Q9BYQ4 174 aa2.17□□□□□ -2.06
HIPK3-204ENST00000525975 KRTAP4-5Q9BYR2 181 aa2.15□□□□□ -2.06
HIPK3-204ENST00000525975 BIRC6Q9NR09 4857 aa2.15□□□□□ -2.07
HIPK3-204ENST00000525975 LCE5AQ5TCM9 118 aa2.15□□□□□ -2.07
HIPK3-204ENST00000525975 MUC2Q02817 5179 aa2.15□□□□□ -2.07
HIPK3-204ENST00000525975 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
HIPK3-204ENST00000525975 KRTAP9-4Q9BYQ2 154 aa2.14□□□□□ -2.07
HIPK3-204ENST00000525975 TNP1P09430 55 aa2.14□□□□□ -2.07
HIPK3-204ENST00000525975 LRP2P98164 4655 aa2.13□□□□□ -2.07
HIPK3-204ENST00000525975 RNF213Q63HN8 5207 aa2.11□□□□□ -2.07
HIPK3-204ENST00000525975 PRO2289Q9P1D8 64 aa2.1□□□□□ -2.07
HIPK3-204ENST00000525975 UBR4Q5T4S7 5183 aa2.1□□□□□ -2.07
HIPK3-204ENST00000525975 KRTAP9-3Q9BYQ3 159 aa2.07□□□□□ -2.08
HIPK3-204ENST00000525975 MT1HL1P0DM35 61 aa2.07□□□□□ -2.08
HIPK3-204ENST00000525975 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
HIPK3-204ENST00000525975 INE1O15225 51 aa2.04□□□□□ -2.08
HIPK3-204ENST00000525975 LCE3BQ5TA77 95 aa2.03□□□□□ -2.08
HIPK3-204ENST00000525975 FAT4Q6V0I7 4981 aa2.02□□□□□ -2.09
HIPK3-204ENST00000525975 HMCN2Q8NDA2 5059 aa2.01□□□□□ -2.09
HIPK3-204ENST00000525975 KRTAP4-1Q9BYQ7 146 aa1.97□□□□□ -2.09
HIPK3-204ENST00000525975 LCE3AQ5TA76 89 aa1.96□□□□□ -2.1
HIPK3-204ENST00000525975 MUC17Q685J3 4493 aa1.96□□□□□ -2.1
HIPK3-204ENST00000525975 KRTAP4-8A0A0G2JLE6 195 aa1.96□□□□□ -2.1
HIPK3-204ENST00000525975 LCE1DQ5T752 114 aa1.93□□□□□ -2.1
HIPK3-204ENST00000525975 LCE1AQ5T7P2 110 aa1.93□□□□□ -2.1
HIPK3-204ENST00000525975 KRTAP19-2Q3LHN2 52 aa1.9□□□□□ -2.1
HIPK3-204ENST00000525975 M0R2T5 61 aa1.89□□□□□ -2.11
HIPK3-204ENST00000525975 KRTAP4-9Q9BYQ8 210 aa1.88□□□□□ -2.11
HIPK3-204ENST00000525975 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
HIPK3-204ENST00000525975 KRTAP4-7Q9BYR0 210 aa1.87□□□□□ -2.11
HIPK3-204ENST00000525975 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
HIPK3-204ENST00000525975 FSIP2Q5CZC0 6907 aa1.87□□□□□ -2.11
HIPK3-204ENST00000525975 FLGP20930 4061 aaPredicted RBP1.87□□□□□ -2.11
HIPK3-204ENST00000525975 SPRR2GQ9BYE4 73 aa1.87□□□□□ -2.11
HIPK3-204ENST00000525975 KRTAP2-2Q9BYT5 123 aa1.85□□□□□ -2.11
HIPK3-204ENST00000525975 KRTAP4-11Q9BYQ6 195 aa1.85□□□□□ -2.11
HIPK3-204ENST00000525975 KRTAP10-12P60413 245 aa1.84□□□□□ -2.12
HIPK3-204ENST00000525975 KRTAP10-10P60014 251 aa1.84□□□□□ -2.12
HIPK3-204ENST00000525975 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
HIPK3-204ENST00000525975 USH2AO75445 5202 aa1.82□□□□□ -2.12
HIPK3-204ENST00000525975 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
HIPK3-204ENST00000525975 MT1FP04733 61 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms