RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 LAMA3Q16787 3333 aa-0.08□□□□□ -2.42
ATM-208ENST00000525537 SPTAN1Q13813 2472 aaKnown RBP-0.08□□□□□ -2.42
ATM-208ENST00000525537 COL6A5A8TX70 2615 aa-0.08□□□□□ -2.42
ATM-208ENST00000525537 UTP20O75691 2785 aaKnown RBP-0.08□□□□□ -2.42
ATM-208ENST00000525537 SPRR2EP22531 72 aa-0.08□□□□□ -2.42
ATM-208ENST00000525537 MGAM2Q2M2H8 2515 aa-0.08□□□□□ -2.42
ATM-208ENST00000525537 NIPBLQ6KC79 2804 aaeCLIP-0.08□□□□□ -2.42
ATM-208ENST00000525537 MGAQ8IWI9 3026 aa-0.08□□□□□ -2.42
ATM-208ENST00000525537 EYSQ5T1H1 3165 aa-0.08□□□□□ -2.42
ATM-208ENST00000525537 TIAM1Q13009 1591 aa-0.09□□□□□ -2.42
ATM-208ENST00000525537 C9orf92A6NGG3 77 aa-0.09□□□□□ -2.42
ATM-208ENST00000525537 KRTAP19-8Q3LI54 63 aa-0.09□□□□□ -2.42
ATM-208ENST00000525537 KRTAP20-2Q3LI61 65 aa-0.09□□□□□ -2.42
ATM-208ENST00000525537 DOPEY1Q5JWR5 2465 aa-0.09□□□□□ -2.42
ATM-208ENST00000525537 CHD7Q9P2D1 2997 aa-0.09□□□□□ -2.42
ATM-208ENST00000525537 ALS2Q96Q42 1657 aa-0.1□□□□□ -2.43
ATM-208ENST00000525537 FAM208AQ9UK61 1670 aaKnown RBP-0.1□□□□□ -2.43
ATM-208ENST00000525537 SPRR2FQ96RM1 72 aa-0.1□□□□□ -2.43
ATM-208ENST00000525537 CPS1P31327 1500 aa-0.1□□□□□ -2.43
ATM-208ENST00000525537 ABCA10Q8WWZ4 1543 aa-0.1□□□□□ -2.43
ATM-208ENST00000525537 SMG1Q96Q15 3661 aaKnown RBP-0.1□□□□□ -2.43
ATM-208ENST00000525537 MYO9AB2RTY4 2548 aa-0.1□□□□□ -2.43
ATM-208ENST00000525537 ITPR1Q14643 2758 aa-0.1□□□□□ -2.43
ATM-208ENST00000525537 LAMA2P24043 3122 aaKnown RBP-0.1□□□□□ -2.43
ATM-208ENST00000525537 LRBAP50851 2863 aa-0.1□□□□□ -2.43
ATM-208ENST00000525537 CFAP46Q8IYW2 2715 aa-0.1□□□□□ -2.43
ATM-208ENST00000525537 DDX60Q8IY21 1712 aaKnown RBP-0.1□□□□□ -2.43
ATM-208ENST00000525537 VPS13CQ709C8 3753 aa-0.11□□□□□ -2.43
ATM-208ENST00000525537 IGIPA6NJ69 53 aa-0.11□□□□□ -2.43
ATM-208ENST00000525537 CRYBG3Q68DQ2 2970 aa-0.11□□□□□ -2.43
ATM-208ENST00000525537 DMXL2Q8TDJ6 3036 aa-0.11□□□□□ -2.43
ATM-208ENST00000525537 LMO7Q8WWI1 1683 aa-0.11□□□□□ -2.43
ATM-208ENST00000525537 CLASP1Q7Z460 1538 aa-0.12□□□□□ -2.43
ATM-208ENST00000525537 MT1AP04731 61 aa-0.12□□□□□ -2.43
ATM-208ENST00000525537 MT4P47944 62 aa-0.12□□□□□ -2.43
ATM-208ENST00000525537 KRTAP19-5Q3LI72 72 aa-0.12□□□□□ -2.43
ATM-208ENST00000525537 CSMD2Q7Z408 3487 aa-0.12□□□□□ -2.43
ATM-208ENST00000525537 TLN1Q9Y490 2541 aaKnown RBP-0.12□□□□□ -2.43
ATM-208ENST00000525537 UGGT1Q9NYU2 1555 aa-0.12□□□□□ -2.43
ATM-208ENST00000525537 MYO15AQ9UKN7 3530 aa-0.12□□□□□ -2.43
ATM-208ENST00000525537 EEA1Q15075 1411 aa-0.13□□□□□ -2.43
ATM-208ENST00000525537 CFAP54Q96N23 3096 aa-0.13□□□□□ -2.43
ATM-208ENST00000525537 IQGAP1P46940 1657 aa-0.13□□□□□ -2.43
ATM-208ENST00000525537 PRXQ9BXM0 1461 aa-0.13□□□□□ -2.43
ATM-208ENST00000525537 DEFB110Q30KQ9 67 aa-0.13□□□□□ -2.43
ATM-208ENST00000525537 CEP295Q9C0D2 2601 aa-0.13□□□□□ -2.43
ATM-208ENST00000525537 ATMQ13315 3056 aa-0.13□□□□□ -2.43
ATM-208ENST00000525537 PRUNE2Q8WUY3 3088 aa-0.13□□□□□ -2.43
ATM-208ENST00000525537 NRXN3Q9Y4C0 1643 aa-0.13□□□□□ -2.43
ATM-208ENST00000525537 MAST1Q9Y2H9 1570 aa-0.14□□□□□ -2.43
ATM-208ENST00000525537 CEP350Q5VT06 3117 aa-0.14□□□□□ -2.43
ATM-208ENST00000525537 SMR3BP02814 79 aaPredicted RBP-0.14□□□□□ -2.43
ATM-208ENST00000525537 DMDP11532 3685 aa-0.14□□□□□ -2.43
ATM-208ENST00000525537 FRYLO94915 3013 aa-0.14□□□□□ -2.43
ATM-208ENST00000525537 FREM2Q5SZK8 3169 aa-0.15□□□□□ -2.43
ATM-208ENST00000525537 IGLV5-48A0A075B6I7 105 aa-0.15□□□□□ -2.43
ATM-208ENST00000525537 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.15□□□□□ -2.43
ATM-208ENST00000525537 EFCAB6Q5THR3 1501 aa-0.15□□□□□ -2.43
ATM-208ENST00000525537 XIRP2A4UGR9 3374 aa-0.15□□□□□ -2.43
ATM-208ENST00000525537 MUC3AQ02505 3323 aa-0.15□□□□□ -2.43
ATM-208ENST00000525537 KIF21BO75037 1637 aa-0.16□□□□□ -2.43
ATM-208ENST00000525537 PCNTO95613 3336 aa-0.16□□□□□ -2.43
ATM-208ENST00000525537 NFAT5O94916 1531 aa-0.16□□□□□ -2.43
ATM-208ENST00000525537 AGLP35573 1532 aa-0.16□□□□□ -2.43
ATM-208ENST00000525537 USP34Q70CQ2 3546 aa-0.16□□□□□ -2.43
ATM-208ENST00000525537 H3BUA1 57 aa-0.16□□□□□ -2.44
ATM-208ENST00000525537 MT1HP80294 61 aa-0.16□□□□□ -2.44
ATM-208ENST00000525537 KRTAP20-1Q3LI63 56 aa-0.16□□□□□ -2.44
ATM-208ENST00000525537 KRTAP8-1Q8IUC2 63 aa-0.16□□□□□ -2.44
ATM-208ENST00000525537 SZT2Q5T011 3432 aa-0.16□□□□□ -2.44
ATM-208ENST00000525537 WDFY4Q6ZS81 3184 aa-0.16□□□□□ -2.44
ATM-208ENST00000525537 PREX2Q70Z35 1606 aa-0.16□□□□□ -2.44
ATM-208ENST00000525537 CEP250Q9BV73 2442 aa-0.17□□□□□ -2.44
ATM-208ENST00000525537 TNP1P09430 55 aa-0.17□□□□□ -2.44
ATM-208ENST00000525537 DEFB1P60022 68 aa-0.17□□□□□ -2.44
ATM-208ENST00000525537 WDFY3Q8IZQ1 3526 aa-0.17□□□□□ -2.44
ATM-208ENST00000525537 KAAG1Q9UBP8 84 aa-0.17□□□□□ -2.44
ATM-208ENST00000525537 CLTCL1P53675 1640 aa-0.17□□□□□ -2.44
ATM-208ENST00000525537 ABCA5Q8WWZ7 1642 aa-0.17□□□□□ -2.44
ATM-208ENST00000525537 ITPR2Q14571 2701 aa-0.17□□□□□ -2.44
ATM-208ENST00000525537 SPEGQ15772 3267 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 SYCP2Q9BX26 1530 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 BOD1L1Q8NFC6 3051 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 MMP24-AS1A0A0U1RRL7 71 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 MT1GP13640 62 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 MT1XP80297 61 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 TFF3Q07654 80 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 WFDC10BQ8IUB3 73 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 LINC00308Q8TCZ7 52 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 DNAH12Q6ZR08 3092 aa-0.18□□□□□ -2.44
ATM-208ENST00000525537 MKI67P46013 3256 aaKnown RBP-0.19□□□□□ -2.44
ATM-208ENST00000525537 UNC80Q8N2C7 3258 aa-0.19□□□□□ -2.44
ATM-208ENST00000525537 M0QY20 66 aa-0.19□□□□□ -2.44
ATM-208ENST00000525537 CLPSL2Q6UWE3 100 aa-0.19□□□□□ -2.44
ATM-208ENST00000525537 NOP10Q9NPE3 64 aaKnown RBP-0.19□□□□□ -2.44
ATM-208ENST00000525537 DCHS1Q96JQ0 3298 aa-0.19□□□□□ -2.44
ATM-208ENST00000525537 ABCC8Q09428 1581 aa-0.19□□□□□ -2.44
ATM-208ENST00000525537 EP400Q96L91 3159 aa-0.2□□□□□ -2.44
ATM-208ENST00000525537 ASPMQ8IZT6 3477 aa-0.2□□□□□ -2.44
ATM-208ENST00000525537 MT1EP04732 61 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms