RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 HSPG2P98160 4391 aa6.55□□□□□ -1.36
SCUBE2-208ENST00000524317 RYR1P21817 5038 aa6.5□□□□□ -1.37
SCUBE2-208ENST00000524317 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
SCUBE2-208ENST00000524317 LRP1Q07954 4544 aaKnown RBP6.46□□□□□ -1.37
SCUBE2-208ENST00000524317 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
SCUBE2-208ENST00000524317 TNXBP22105 4242 aa6.45□□□□□ -1.38
SCUBE2-208ENST00000524317 Q5VSD8 79 aa6.43□□□□□ -1.38
SCUBE2-208ENST00000524317 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
SCUBE2-208ENST00000524317 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
SCUBE2-208ENST00000524317 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
SCUBE2-208ENST00000524317 K7ERS5 55 aa6.41□□□□□ -1.38
SCUBE2-208ENST00000524317 EPPK1P58107 5090 aaKnown RBP6.4□□□□□ -1.39
SCUBE2-208ENST00000524317 C9orf92A6NGG3 77 aa6.38□□□□□ -1.39
SCUBE2-208ENST00000524317 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
SCUBE2-208ENST00000524317 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
SCUBE2-208ENST00000524317 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
SCUBE2-208ENST00000524317 C20orf166-AS1Q96NR2 134 aa6.34□□□□□ -1.39
SCUBE2-208ENST00000524317 A8MUU9 505 aa6.34□□□□□ -1.39
SCUBE2-208ENST00000524317 P0C880 135 aa6.33□□□□□ -1.4
SCUBE2-208ENST00000524317 MYCBP2O75592 4640 aa6.32□□□□□ -1.4
SCUBE2-208ENST00000524317 FLG2Q5D862 2391 aaPredicted RBP6.31□□□□□ -1.4
SCUBE2-208ENST00000524317 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
SCUBE2-208ENST00000524317 MT1HL1P0DM35 61 aa6.24□□□□□ -1.41
SCUBE2-208ENST00000524317 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.41
SCUBE2-208ENST00000524317 KRTAP4-6Q9BYQ5 205 aa6.21□□□□□ -1.41
SCUBE2-208ENST00000524317 H0YAA0 97 aa6.19□□□□□ -1.42
SCUBE2-208ENST00000524317 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
SCUBE2-208ENST00000524317 NDUFAF8A1L188 74 aa6.15□□□□□ -1.42
SCUBE2-208ENST00000524317 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.43
SCUBE2-208ENST00000524317 XP32Q5T750 250 aa6.14□□□□□ -1.43
SCUBE2-208ENST00000524317 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
SCUBE2-208ENST00000524317 RPL37P61927 97 aaKnown RBP6.13□□□□□ -1.43
SCUBE2-208ENST00000524317 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
SCUBE2-208ENST00000524317 KRTAP4-5Q9BYR2 181 aa6.11□□□□□ -1.43
SCUBE2-208ENST00000524317 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
SCUBE2-208ENST00000524317 A0A1B0GU33 70 aa6.09□□□□□ -1.43
SCUBE2-208ENST00000524317 LPAP08519 4548 aa6.05□□□□□ -1.44
SCUBE2-208ENST00000524317 COX6B2Q6YFQ2 88 aa6.05□□□□□ -1.44
SCUBE2-208ENST00000524317 H1FX-AS1Q4G0G2 97 aa6.04□□□□□ -1.44
SCUBE2-208ENST00000524317 HERC2O95714 4834 aa6.03□□□□□ -1.44
SCUBE2-208ENST00000524317 LRP2P98164 4655 aa6.03□□□□□ -1.44
SCUBE2-208ENST00000524317 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
SCUBE2-208ENST00000524317 PCLOQ9Y6V0 5065 aa5.89□□□□□ -1.47
SCUBE2-208ENST00000524317 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
SCUBE2-208ENST00000524317 S4R3F8 94 aa5.85□□□□□ -1.47
SCUBE2-208ENST00000524317 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
SCUBE2-208ENST00000524317 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
SCUBE2-208ENST00000524317 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
SCUBE2-208ENST00000524317 HERC1Q15751 4861 aa5.75□□□□□ -1.49
SCUBE2-208ENST00000524317 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
SCUBE2-208ENST00000524317 KRTAP4-1Q9BYQ7 146 aa5.71□□□□□ -1.49
SCUBE2-208ENST00000524317 R4GN34 69 aa5.71□□□□□ -1.49
SCUBE2-208ENST00000524317 MUC2Q02817 5179 aa5.69□□□□□ -1.5
SCUBE2-208ENST00000524317 A0A0D9SG42 100 aa5.69□□□□□ -1.5
SCUBE2-208ENST00000524317 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
SCUBE2-208ENST00000524317 KRTAP13-4Q3LI77 160 aa5.64□□□□□ -1.51
SCUBE2-208ENST00000524317 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
SCUBE2-208ENST00000524317 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
SCUBE2-208ENST00000524317 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
SCUBE2-208ENST00000524317 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
SCUBE2-208ENST00000524317 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
SCUBE2-208ENST00000524317 M0QZ58 72 aa5.49□□□□□ -1.53
SCUBE2-208ENST00000524317 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
SCUBE2-208ENST00000524317 UBR4Q5T4S7 5183 aa5.48□□□□□ -1.53
SCUBE2-208ENST00000524317 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
SCUBE2-208ENST00000524317 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
SCUBE2-208ENST00000524317 FAT4Q6V0I7 4981 aa5.45□□□□□ -1.54
SCUBE2-208ENST00000524317 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
SCUBE2-208ENST00000524317 KRTAP9-2Q9BYQ4 174 aa5.42□□□□□ -1.54
SCUBE2-208ENST00000524317 RNF213Q63HN8 5207 aa5.41□□□□□ -1.54
SCUBE2-208ENST00000524317 KRTAP9-6A0A140TA67 174 aa5.41□□□□□ -1.54
SCUBE2-208ENST00000524317 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
SCUBE2-208ENST00000524317 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.55
SCUBE2-208ENST00000524317 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
SCUBE2-208ENST00000524317 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
SCUBE2-208ENST00000524317 MT1HP80294 61 aa5.23□□□□□ -1.57
SCUBE2-208ENST00000524317 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
SCUBE2-208ENST00000524317 M0R2T5 61 aa5.2□□□□□ -1.58
SCUBE2-208ENST00000524317 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
SCUBE2-208ENST00000524317 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
SCUBE2-208ENST00000524317 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
SCUBE2-208ENST00000524317 MT2AP02795 61 aa5.08□□□□□ -1.6
SCUBE2-208ENST00000524317 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
SCUBE2-208ENST00000524317 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
SCUBE2-208ENST00000524317 MT1FP04733 61 aa5.07□□□□□ -1.6
SCUBE2-208ENST00000524317 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
SCUBE2-208ENST00000524317 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
SCUBE2-208ENST00000524317 LCE1FQ5T754 118 aa5.03□□□□□ -1.6
SCUBE2-208ENST00000524317 LCE1DQ5T752 114 aa5□□□□□ -1.61
SCUBE2-208ENST00000524317 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
SCUBE2-208ENST00000524317 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
SCUBE2-208ENST00000524317 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
SCUBE2-208ENST00000524317 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.61
SCUBE2-208ENST00000524317 INE1O15225 51 aa4.95□□□□□ -1.62
SCUBE2-208ENST00000524317 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.62
SCUBE2-208ENST00000524317 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
SCUBE2-208ENST00000524317 TNP1P09430 55 aa4.88□□□□□ -1.63
SCUBE2-208ENST00000524317 MT1BP07438 61 aa4.85□□□□□ -1.63
SCUBE2-208ENST00000524317 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
SCUBE2-208ENST00000524317 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms