RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 LINC01554Q52M75 96 aa2.88□□□□□ -1.95
CTNNA1-241ENST00000524127 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.88□□□□□ -1.95
CTNNA1-241ENST00000524127 HERC1Q15751 4861 aa2.87□□□□□ -1.95
CTNNA1-241ENST00000524127 C1orf134Q5TEV5 83 aa2.87□□□□□ -1.95
CTNNA1-241ENST00000524127 PSORS1C2Q9UIG4 136 aa2.87□□□□□ -1.95
CTNNA1-241ENST00000524127 FLG2Q5D862 2391 aaPredicted RBP2.87□□□□□ -1.95
CTNNA1-241ENST00000524127 PRAC1Q96KF2 57 aa2.86□□□□□ -1.95
CTNNA1-241ENST00000524127 RETNLBQ9BQ08 111 aa2.86□□□□□ -1.95
CTNNA1-241ENST00000524127 TNXBP22105 4242 aa2.85□□□□□ -1.95
CTNNA1-241ENST00000524127 IGKV2D-30A0A075B6S6 120 aa2.84□□□□□ -1.95
CTNNA1-241ENST00000524127 A0A087WTM6 91 aa2.84□□□□□ -1.95
CTNNA1-241ENST00000524127 IGLV7-43P04211 117 aa2.84□□□□□ -1.95
CTNNA1-241ENST00000524127 C4orf48Q5BLP8 95 aa2.84□□□□□ -1.95
CTNNA1-241ENST00000524127 KRTAP16-1A8MUX0 517 aa2.83□□□□□ -1.96
CTNNA1-241ENST00000524127 KRTAP10-1P60331 282 aa2.83□□□□□ -1.96
CTNNA1-241ENST00000524127 SPINK6Q6UWN8 80 aa2.83□□□□□ -1.96
CTNNA1-241ENST00000524127 ADM2Q7Z4H4 148 aa2.82□□□□□ -1.96
CTNNA1-241ENST00000524127 CIRBP-AS1Q8TBR5 109 aa2.82□□□□□ -1.96
CTNNA1-241ENST00000524127 ANAPC11Q9NYG5 84 aa2.82□□□□□ -1.96
CTNNA1-241ENST00000524127 CSAG1Q6PB30 78 aa2.79□□□□□ -1.96
CTNNA1-241ENST00000524127 HMCN2Q8NDA2 5059 aa2.77□□□□□ -1.97
CTNNA1-241ENST00000524127 DMBT1Q9UGM3 2413 aaPredicted RBP2.77□□□□□ -1.97
CTNNA1-241ENST00000524127 Q6ZSA8 131 aa2.77□□□□□ -1.97
CTNNA1-241ENST00000524127 A8MUU9 505 aa2.76□□□□□ -1.97
CTNNA1-241ENST00000524127 SMR3BP02814 79 aaPredicted RBP2.76□□□□□ -1.97
CTNNA1-241ENST00000524127 KRTAP10-4P60372 401 aaPredicted RBP2.76□□□□□ -1.97
CTNNA1-241ENST00000524127 KRTAP13-2Q52LG2 175 aa2.76□□□□□ -1.97
CTNNA1-241ENST00000524127 Q8N1X5 172 aa2.76□□□□□ -1.97
CTNNA1-241ENST00000524127 H3BS24 57 aa2.75□□□□□ -1.97
CTNNA1-241ENST00000524127 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
CTNNA1-241ENST00000524127 RPS29P62273 56 aaKnown RBP2.74□□□□□ -1.97
CTNNA1-241ENST00000524127 SPINK1P00995 79 aa2.73□□□□□ -1.97
CTNNA1-241ENST00000524127 A0A1B0GU33 70 aa2.72□□□□□ -1.97
CTNNA1-241ENST00000524127 H0YAA0 97 aa2.72□□□□□ -1.97
CTNNA1-241ENST00000524127 KRTAP1-4P0C5Y4 121 aa2.72□□□□□ -1.97
CTNNA1-241ENST00000524127 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
CTNNA1-241ENST00000524127 Q5VSD8 79 aa2.72□□□□□ -1.97
CTNNA1-241ENST00000524127 LINC00304Q8N9R0 145 aa2.71□□□□□ -1.98
CTNNA1-241ENST00000524127 LRP2P98164 4655 aa2.7□□□□□ -1.98
CTNNA1-241ENST00000524127 K7ERS5 55 aa2.7□□□□□ -1.98
CTNNA1-241ENST00000524127 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
CTNNA1-241ENST00000524127 ROMO1P60602 79 aa2.69□□□□□ -1.98
CTNNA1-241ENST00000524127 TYMSOSQ8TAI1 123 aa2.68□□□□□ -1.98
CTNNA1-241ENST00000524127 C20orf166-AS1Q96NR2 134 aa2.68□□□□□ -1.98
CTNNA1-241ENST00000524127 LPAP08519 4548 aa2.68□□□□□ -1.98
CTNNA1-241ENST00000524127 KRTAP3-1Q9BYR8 98 aa2.66□□□□□ -1.98
CTNNA1-241ENST00000524127 MT1HL1P0DM35 61 aa2.65□□□□□ -1.99
CTNNA1-241ENST00000524127 COX6B2Q6YFQ2 88 aa2.64□□□□□ -1.99
CTNNA1-241ENST00000524127 RNF213Q63HN8 5207 aa2.62□□□□□ -1.99
CTNNA1-241ENST00000524127 RPL37P61927 97 aaKnown RBP2.61□□□□□ -1.99
CTNNA1-241ENST00000524127 MUC17Q685J3 4493 aa2.61□□□□□ -1.99
CTNNA1-241ENST00000524127 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
CTNNA1-241ENST00000524127 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
CTNNA1-241ENST00000524127 P0C880 135 aa2.58□□□□□ -2
CTNNA1-241ENST00000524127 LCE5AQ5TCM9 118 aa2.58□□□□□ -2
CTNNA1-241ENST00000524127 J3QL48 77 aa2.57□□□□□ -2
CTNNA1-241ENST00000524127 KRTAP10-6P60371 365 aaPredicted RBP2.57□□□□□ -2
CTNNA1-241ENST00000524127 C9orf92A6NGG3 77 aa2.56□□□□□ -2
CTNNA1-241ENST00000524127 TPRXLQ17RH7 258 aa2.55□□□□□ -2
CTNNA1-241ENST00000524127 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
CTNNA1-241ENST00000524127 MUC2Q02817 5179 aa2.54□□□□□ -2
CTNNA1-241ENST00000524127 KRTAP15-1Q3LI76 137 aa2.53□□□□□ -2
CTNNA1-241ENST00000524127 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
CTNNA1-241ENST00000524127 CRIPTQ9P021 101 aa2.53□□□□□ -2
CTNNA1-241ENST00000524127 S4R3F8 94 aa2.52□□□□□ -2.01
CTNNA1-241ENST00000524127 FAT4Q6V0I7 4981 aa2.52□□□□□ -2.01
CTNNA1-241ENST00000524127 A0A0D9SG42 100 aa2.49□□□□□ -2.01
CTNNA1-241ENST00000524127 M0QZ58 72 aa2.48□□□□□ -2.01
CTNNA1-241ENST00000524127 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
CTNNA1-241ENST00000524127 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
CTNNA1-241ENST00000524127 KRTAP12-2P59991 146 aa2.46□□□□□ -2.02
CTNNA1-241ENST00000524127 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
CTNNA1-241ENST00000524127 KRTAP9-7A8MTY7 169 aa2.41□□□□□ -2.02
CTNNA1-241ENST00000524127 KRTAP4-1Q9BYQ7 146 aa2.4□□□□□ -2.03
CTNNA1-241ENST00000524127 FLGP20930 4061 aaPredicted RBP2.4□□□□□ -2.03
CTNNA1-241ENST00000524127 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
CTNNA1-241ENST00000524127 KRTAP9-3Q9BYQ3 159 aa2.36□□□□□ -2.03
CTNNA1-241ENST00000524127 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
CTNNA1-241ENST00000524127 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
CTNNA1-241ENST00000524127 R4GN34 69 aa2.31□□□□□ -2.04
CTNNA1-241ENST00000524127 KRTAP23-1A1A580 65 aa2.29□□□□□ -2.04
CTNNA1-241ENST00000524127 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
CTNNA1-241ENST00000524127 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
CTNNA1-241ENST00000524127 A0A0A0MQY5 61 aa2.28□□□□□ -2.04
CTNNA1-241ENST00000524127 SEC61BP60468 96 aaKnown RBP2.25□□□□□ -2.05
CTNNA1-241ENST00000524127 MT1HP80294 61 aa2.24□□□□□ -2.05
CTNNA1-241ENST00000524127 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
CTNNA1-241ENST00000524127 CAMK2N1Q7Z7J9 78 aa2.22□□□□□ -2.05
CTNNA1-241ENST00000524127 USH2AO75445 5202 aa2.2□□□□□ -2.06
CTNNA1-241ENST00000524127 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
CTNNA1-241ENST00000524127 TNP1P09430 55 aa2.19□□□□□ -2.06
CTNNA1-241ENST00000524127 FSIP2Q5CZC0 6907 aa2.17□□□□□ -2.06
CTNNA1-241ENST00000524127 MT2AP02795 61 aa2.11□□□□□ -2.07
CTNNA1-241ENST00000524127 PRO2289Q9P1D8 64 aa2.11□□□□□ -2.07
CTNNA1-241ENST00000524127 INE1O15225 51 aa2.1□□□□□ -2.07
CTNNA1-241ENST00000524127 MT1FP04733 61 aa2.1□□□□□ -2.07
CTNNA1-241ENST00000524127 FCGBPQ9Y6R7 5405 aaPredicted RBP2.09□□□□□ -2.07
CTNNA1-241ENST00000524127 M0R2T5 61 aa2.09□□□□□ -2.07
CTNNA1-241ENST00000524127 CRCT1Q9UGL9 99 aa2.09□□□□□ -2.07
CTNNA1-241ENST00000524127 SPRR2GQ9BYE4 73 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms