RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 FRYLO94915 3013 aa0.43□□□□□ -2.34
PCM1-219ENST00000523540 CELSR3Q9NYQ7 3312 aa0.43□□□□□ -2.34
PCM1-219ENST00000523540 TEX15Q9BXT5 2789 aa0.43□□□□□ -2.34
PCM1-219ENST00000523540 DNAH3Q8TD57 4116 aa0.43□□□□□ -2.34
PCM1-219ENST00000523540 HUWE1Q7Z6Z7 4374 aaKnown RBP0.43□□□□□ -2.34
PCM1-219ENST00000523540 RANBP2P49792 3224 aaKnown RBP0.43□□□□□ -2.34
PCM1-219ENST00000523540 STAB1Q9NY15 2570 aa0.43□□□□□ -2.34
PCM1-219ENST00000523540 DNAH12Q6ZR08 3092 aa0.42□□□□□ -2.34
PCM1-219ENST00000523540 DMXL2Q8TDJ6 3036 aa0.42□□□□□ -2.34
PCM1-219ENST00000523540 H3BNG1 76 aa0.42□□□□□ -2.34
PCM1-219ENST00000523540 RPL39P5Q59GN2 51 aa0.42□□□□□ -2.34
PCM1-219ENST00000523540 ATMQ13315 3056 aa0.42□□□□□ -2.34
PCM1-219ENST00000523540 LAMA3Q16787 3333 aa0.42□□□□□ -2.34
PCM1-219ENST00000523540 ACACBO00763 2458 aa0.42□□□□□ -2.34
PCM1-219ENST00000523540 APC2O95996 2303 aa0.42□□□□□ -2.34
PCM1-219ENST00000523540 NBEAL1Q6ZS30 2694 aa0.41□□□□□ -2.34
PCM1-219ENST00000523540 SMG1Q96Q15 3661 aaKnown RBP0.41□□□□□ -2.34
PCM1-219ENST00000523540 CEP295Q9C0D2 2601 aa0.41□□□□□ -2.34
PCM1-219ENST00000523540 PRM1P04553 51 aa0.41□□□□□ -2.34
PCM1-219ENST00000523540 LAMA5O15230 3695 aa0.41□□□□□ -2.34
PCM1-219ENST00000523540 MGAM2Q2M2H8 2515 aa0.41□□□□□ -2.34
PCM1-219ENST00000523540 DNAH7Q8WXX0 4024 aa0.41□□□□□ -2.34
PCM1-219ENST00000523540 TRIOO75962 3097 aa0.41□□□□□ -2.34
PCM1-219ENST00000523540 C5orf42Q9H799 3197 aa0.41□□□□□ -2.34
PCM1-219ENST00000523540 MYCBP2O75592 4640 aa0.4□□□□□ -2.35
PCM1-219ENST00000523540 DEFB110Q30KQ9 67 aa0.4□□□□□ -2.35
PCM1-219ENST00000523540 ADGRG4Q8IZF6 3080 aa0.4□□□□□ -2.35
PCM1-219ENST00000523540 LAMA1P25391 3075 aa0.39□□□□□ -2.35
PCM1-219ENST00000523540 SPTAN1Q13813 2472 aaKnown RBP0.39□□□□□ -2.35
PCM1-219ENST00000523540 DEFB108AA8MXU0 73 aa0.39□□□□□ -2.35
PCM1-219ENST00000523540 SPART-AS1P0CW21 52 aa0.39□□□□□ -2.35
PCM1-219ENST00000523540 RELNP78509 3460 aa0.39□□□□□ -2.35
PCM1-219ENST00000523540 CSMD1Q96PZ7 3565 aa0.39□□□□□ -2.35
PCM1-219ENST00000523540 STAB2Q8WWQ8 2551 aa0.39□□□□□ -2.35
PCM1-219ENST00000523540 CUBNO60494 3623 aa0.38□□□□□ -2.35
PCM1-219ENST00000523540 PKHD1L1Q86WI1 4243 aa0.38□□□□□ -2.35
PCM1-219ENST00000523540 DYNC2H1Q8NCM8 4307 aaKnown RBP0.37□□□□□ -2.35
PCM1-219ENST00000523540 DNAH8Q96JB1 4490 aa0.37□□□□□ -2.35
PCM1-219ENST00000523540 VPS13DQ5THJ4 4388 aa0.37□□□□□ -2.35
PCM1-219ENST00000523540 H3BUX3 64 aa0.37□□□□□ -2.35
PCM1-219ENST00000523540 COL6A3P12111 3177 aa0.37□□□□□ -2.35
PCM1-219ENST00000523540 DNAH6Q9C0G6 4158 aa0.36□□□□□ -2.35
PCM1-219ENST00000523540 SONP18583 2426 aaKnown RBP0.36□□□□□ -2.35
PCM1-219ENST00000523540 DOPEY1Q5JWR5 2465 aa0.36□□□□□ -2.35
PCM1-219ENST00000523540 RHPN1-AS1Q9BWJ2 59 aa0.36□□□□□ -2.35
PCM1-219ENST00000523540 DNAH2Q9P225 4427 aa0.36□□□□□ -2.35
PCM1-219ENST00000523540 PKHD1P08F94 4074 aa0.36□□□□□ -2.35
PCM1-219ENST00000523540 BOD1L1Q8NFC6 3051 aa0.36□□□□□ -2.35
PCM1-219ENST00000523540 TRRAPQ9Y4A5 3859 aa0.36□□□□□ -2.35
PCM1-219ENST00000523540 SPTBN5Q9NRC6 3674 aaKnown RBP0.35□□□□□ -2.35
PCM1-219ENST00000523540 APELAP0DMC3 54 aa0.35□□□□□ -2.35
PCM1-219ENST00000523540 SPRR2DP22532 72 aa0.35□□□□□ -2.35
PCM1-219ENST00000523540 DNAH9Q9NYC9 4486 aa0.34□□□□□ -2.35
PCM1-219ENST00000523540 MUC3AQ02505 3323 aa0.34□□□□□ -2.35
PCM1-219ENST00000523540 ANK3Q12955 4377 aaKnown RBP0.34□□□□□ -2.35
PCM1-219ENST00000523540 A0A096LNI7 61 aa0.34□□□□□ -2.36
PCM1-219ENST00000523540 DMDP11532 3685 aa0.34□□□□□ -2.36
PCM1-219ENST00000523540 KRTAP8-1Q8IUC2 63 aa0.34□□□□□ -2.36
PCM1-219ENST00000523540 LAMA2P24043 3122 aaKnown RBP0.34□□□□□ -2.36
PCM1-219ENST00000523540 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.36
PCM1-219ENST00000523540 SVEP1Q4LDE5 3571 aa0.34□□□□□ -2.36
PCM1-219ENST00000523540 APOBP04114 4563 aaKnown RBP0.33□□□□□ -2.36
PCM1-219ENST00000523540 SPRR2BP35325 72 aa0.33□□□□□ -2.36
PCM1-219ENST00000523540 DEFB1P60022 68 aa0.33□□□□□ -2.36
PCM1-219ENST00000523540 LPAP08519 4548 aa0.33□□□□□ -2.36
PCM1-219ENST00000523540 DNAH1Q9P2D7 4330 aa0.33□□□□□ -2.36
PCM1-219ENST00000523540 CEP350Q5VT06 3117 aa0.33□□□□□ -2.36
PCM1-219ENST00000523540 WDFY4Q6ZS81 3184 aa0.32□□□□□ -2.36
PCM1-219ENST00000523540 VPS13CQ709C8 3753 aa0.32□□□□□ -2.36
PCM1-219ENST00000523540 DEFB124Q8NES8 71 aa0.32□□□□□ -2.36
PCM1-219ENST00000523540 MYO9AB2RTY4 2548 aa0.32□□□□□ -2.36
PCM1-219ENST00000523540 TLN1Q9Y490 2541 aaKnown RBP0.32□□□□□ -2.36
PCM1-219ENST00000523540 FAT3Q8TDW7 4589 aa0.32□□□□□ -2.36
PCM1-219ENST00000523540 HSPG2P98160 4391 aa0.32□□□□□ -2.36
PCM1-219ENST00000523540 CMYA5Q8N3K9 4069 aa0.31□□□□□ -2.36
PCM1-219ENST00000523540 MKI67P46013 3256 aaKnown RBP0.31□□□□□ -2.36
PCM1-219ENST00000523540 HTN1P15515 57 aa0.31□□□□□ -2.36
PCM1-219ENST00000523540 DEFB136Q30KP8 78 aa0.31□□□□□ -2.36
PCM1-219ENST00000523540 FREM2Q5SZK8 3169 aa0.31□□□□□ -2.36
PCM1-219ENST00000523540 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
PCM1-219ENST00000523540 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
PCM1-219ENST00000523540 DNAH10Q8IVF4 4471 aa0.3□□□□□ -2.36
PCM1-219ENST00000523540 MT1AP04731 61 aa0.3□□□□□ -2.36
PCM1-219ENST00000523540 SPRR2AP35326 72 aa0.3□□□□□ -2.36
PCM1-219ENST00000523540 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
PCM1-219ENST00000523540 CFAP47Q6ZTR5 3102 aa0.29□□□□□ -2.36
PCM1-219ENST00000523540 SZT2Q5T011 3432 aa0.29□□□□□ -2.36
PCM1-219ENST00000523540 SMR3BP02814 79 aaPredicted RBP0.29□□□□□ -2.36
PCM1-219ENST00000523540 DCHS1Q96JQ0 3298 aa0.29□□□□□ -2.36
PCM1-219ENST00000523540 KRTAP19-5Q3LI72 72 aa0.28□□□□□ -2.36
PCM1-219ENST00000523540 CSMD2Q7Z408 3487 aa0.28□□□□□ -2.37
PCM1-219ENST00000523540 STATHP02808 62 aa0.27□□□□□ -2.37
PCM1-219ENST00000523540 SPRR2EP22531 72 aa0.27□□□□□ -2.37
PCM1-219ENST00000523540 PLECQ15149 4684 aaKnown RBP0.27□□□□□ -2.37
PCM1-219ENST00000523540 DEFB133Q30KQ1 61 aa0.27□□□□□ -2.37
PCM1-219ENST00000523540 SPRR2FQ96RM1 72 aa0.27□□□□□ -2.37
PCM1-219ENST00000523540 LRP1BQ9NZR2 4599 aa0.26□□□□□ -2.37
PCM1-219ENST00000523540 DNAH17Q9UFH2 4485 aa0.26□□□□□ -2.37
PCM1-219ENST00000523540 SRCAPQ6ZRS2 3230 aa0.25□□□□□ -2.37
PCM1-219ENST00000523540 XIRP2A4UGR9 3374 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms