RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 KRTAP16-1A8MUX0 517 aa6.68□□□□□ -1.34
PABPC1-219ENST00000522387 C8orf87E5RJ46 101 aa6.67□□□□□ -1.34
PABPC1-219ENST00000522387 SPINK7P58062 85 aa6.65□□□□□ -1.34
PABPC1-219ENST00000522387 KTN1-AS1Q86SY8 53 aa6.64□□□□□ -1.35
PABPC1-219ENST00000522387 A6NN06 94 aa6.63□□□□□ -1.35
PABPC1-219ENST00000522387 ACYP2P14621 99 aa6.63□□□□□ -1.35
PABPC1-219ENST00000522387 RPL37P61927 97 aaKnown RBP6.6□□□□□ -1.35
PABPC1-219ENST00000522387 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
PABPC1-219ENST00000522387 A8MUU9 505 aa6.59□□□□□ -1.35
PABPC1-219ENST00000522387 DMAC1Q96GE9 116 aa6.59□□□□□ -1.36
PABPC1-219ENST00000522387 IGKV2-30P06310 120 aa6.55□□□□□ -1.36
PABPC1-219ENST00000522387 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
PABPC1-219ENST00000522387 C7orf65Q6ZTY9 151 aa6.52□□□□□ -1.37
PABPC1-219ENST00000522387 IGKV2D-30A0A075B6S6 120 aa6.51□□□□□ -1.37
PABPC1-219ENST00000522387 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
PABPC1-219ENST00000522387 RBM12B-AS1Q9P1G2 102 aa6.51□□□□□ -1.37
PABPC1-219ENST00000522387 MUC17Q685J3 4493 aa6.5□□□□□ -1.37
PABPC1-219ENST00000522387 A0A1B0GU69 56 aa6.49□□□□□ -1.37
PABPC1-219ENST00000522387 FAT4Q6V0I7 4981 aa6.48□□□□□ -1.37
PABPC1-219ENST00000522387 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
PABPC1-219ENST00000522387 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
PABPC1-219ENST00000522387 UQCR11O14957 56 aa6.38□□□□□ -1.39
PABPC1-219ENST00000522387 PRAC1Q96KF2 57 aa6.34□□□□□ -1.39
PABPC1-219ENST00000522387 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
PABPC1-219ENST00000522387 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
PABPC1-219ENST00000522387 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
PABPC1-219ENST00000522387 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
PABPC1-219ENST00000522387 LCE2CQ5TA81 110 aa6.19□□□□□ -1.42
PABPC1-219ENST00000522387 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
PABPC1-219ENST00000522387 LCE2BO14633 110 aa6.16□□□□□ -1.42
PABPC1-219ENST00000522387 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
PABPC1-219ENST00000522387 H0YAA0 97 aa6.15□□□□□ -1.43
PABPC1-219ENST00000522387 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
PABPC1-219ENST00000522387 A0A1B0GU33 70 aa6.11□□□□□ -1.43
PABPC1-219ENST00000522387 M0R2T5 61 aa6.11□□□□□ -1.43
PABPC1-219ENST00000522387 MT1HP80294 61 aa6.1□□□□□ -1.43
PABPC1-219ENST00000522387 H1FX-AS1Q4G0G2 97 aa6.09□□□□□ -1.43
PABPC1-219ENST00000522387 S4R3F8 94 aa6.02□□□□□ -1.45
PABPC1-219ENST00000522387 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
PABPC1-219ENST00000522387 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
PABPC1-219ENST00000522387 K7ERS5 55 aa5.94□□□□□ -1.46
PABPC1-219ENST00000522387 KRTAP10-6P60371 365 aaPredicted RBP5.9□□□□□ -1.46
PABPC1-219ENST00000522387 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-219ENST00000522387 CRIPTQ9P021 101 aa5.86□□□□□ -1.47
PABPC1-219ENST00000522387 KRTAP13-4Q3LI77 160 aa5.83□□□□□ -1.48
PABPC1-219ENST00000522387 KRTAP9-8Q9BYQ0 159 aa5.83□□□□□ -1.48
PABPC1-219ENST00000522387 ROMO1P60602 79 aa5.82□□□□□ -1.48
PABPC1-219ENST00000522387 A0A0D9SG42 100 aa5.82□□□□□ -1.48
PABPC1-219ENST00000522387 P0C880 135 aa5.8□□□□□ -1.48
PABPC1-219ENST00000522387 MT2AP02795 61 aa5.79□□□□□ -1.48
PABPC1-219ENST00000522387 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
PABPC1-219ENST00000522387 KRTAP10-10P60014 251 aa5.79□□□□□ -1.48
PABPC1-219ENST00000522387 MT1FP04733 61 aa5.78□□□□□ -1.48
PABPC1-219ENST00000522387 H3BS24 57 aa5.74□□□□□ -1.49
PABPC1-219ENST00000522387 USH2AO75445 5202 aa5.7□□□□□ -1.5
PABPC1-219ENST00000522387 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
PABPC1-219ENST00000522387 C10orf95Q9H7T3 257 aa5.64□□□□□ -1.51
PABPC1-219ENST00000522387 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
PABPC1-219ENST00000522387 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
PABPC1-219ENST00000522387 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
PABPC1-219ENST00000522387 R4GN34 69 aa5.58□□□□□ -1.52
PABPC1-219ENST00000522387 M0QZ58 72 aa5.56□□□□□ -1.52
PABPC1-219ENST00000522387 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
PABPC1-219ENST00000522387 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
PABPC1-219ENST00000522387 SPRR2GQ9BYE4 73 aa5.49□□□□□ -1.53
PABPC1-219ENST00000522387 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
PABPC1-219ENST00000522387 SSPOA2VEC9 5147 aa5.45□□□□□ -1.54
PABPC1-219ENST00000522387 MT1BP07438 61 aa5.38□□□□□ -1.55
PABPC1-219ENST00000522387 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
PABPC1-219ENST00000522387 KRTAP19-8Q3LI54 63 aa5.36□□□□□ -1.55
PABPC1-219ENST00000522387 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
PABPC1-219ENST00000522387 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
PABPC1-219ENST00000522387 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
PABPC1-219ENST00000522387 CRCT1Q9UGL9 99 aa5.27□□□□□ -1.57
PABPC1-219ENST00000522387 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
PABPC1-219ENST00000522387 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
PABPC1-219ENST00000522387 KRTAP19-6Q3LI70 58 aa5.18□□□□□ -1.58
PABPC1-219ENST00000522387 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
PABPC1-219ENST00000522387 MT1XP80297 61 aa5.16□□□□□ -1.58
PABPC1-219ENST00000522387 KMT2DO14686 5537 aa5.16□□□□□ -1.58
PABPC1-219ENST00000522387 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
PABPC1-219ENST00000522387 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
PABPC1-219ENST00000522387 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
PABPC1-219ENST00000522387 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
PABPC1-219ENST00000522387 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
PABPC1-219ENST00000522387 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
PABPC1-219ENST00000522387 TNP1P09430 55 aa4.97□□□□□ -1.61
PABPC1-219ENST00000522387 LUZP6Q538Z0 58 aa4.96□□□□□ -1.61
PABPC1-219ENST00000522387 KRTAP4-8A0A0G2JLE6 195 aa4.91□□□□□ -1.62
PABPC1-219ENST00000522387 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
PABPC1-219ENST00000522387 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
PABPC1-219ENST00000522387 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.89□□□□□ -1.63
PABPC1-219ENST00000522387 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
PABPC1-219ENST00000522387 MUC12Q9UKN1 5478 aa4.81□□□□□ -1.64
PABPC1-219ENST00000522387 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
PABPC1-219ENST00000522387 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
PABPC1-219ENST00000522387 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
PABPC1-219ENST00000522387 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
PABPC1-219ENST00000522387 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
PABPC1-219ENST00000522387 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms