RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 LOC101927531A0A1B0GV80 90 aa9.19□□□□□ -0.94
SDCBP-209ENST00000522243 ACYP1P07311 99 aa9.15□□□□□ -0.94
SDCBP-209ENST00000522243 HIST1H4AP62805 103 aaKnown RBP9.15□□□□□ -0.94
SDCBP-209ENST00000522243 KRTAP10-5P60370 271 aa9.12□□□□□ -0.95
SDCBP-209ENST00000522243 H0Y9P7 68 aa9.11□□□□□ -0.95
SDCBP-209ENST00000522243 UQCRQO14949 82 aa9.1□□□□□ -0.95
SDCBP-209ENST00000522243 ATP5EP2Q5VTU8 51 aa9.1□□□□□ -0.95
SDCBP-209ENST00000522243 FAM240AA0A1B0GVK7 77 aa9.08□□□□□ -0.96
SDCBP-209ENST00000522243 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
SDCBP-209ENST00000522243 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
SDCBP-209ENST00000522243 ATOX1O00244 68 aa9.03□□□□□ -0.96
SDCBP-209ENST00000522243 NDUFC1O43677 76 aa9.03□□□□□ -0.96
SDCBP-209ENST00000522243 H0YAA0 97 aa8.95□□□□□ -0.98
SDCBP-209ENST00000522243 LINC00208Q96KT6 92 aa8.95□□□□□ -0.98
SDCBP-209ENST00000522243 LINC00643Q86TS7 51 aa8.94□□□□□ -0.98
SDCBP-209ENST00000522243 ADM2Q7Z4H4 148 aa8.93□□□□□ -0.98
SDCBP-209ENST00000522243 A8MUN3 132 aa8.92□□□□□ -0.98
SDCBP-209ENST00000522243 NEBP20929 6669 aa8.87□□□□□ -0.99
SDCBP-209ENST00000522243 MP68P56378 58 aa8.85□□□□□ -0.99
SDCBP-209ENST00000522243 OCR1Q9BZK8 76 aa8.85□□□□□ -0.99
SDCBP-209ENST00000522243 KRTAP5-9P26371 169 aa8.84□□□□□ -0.99
SDCBP-209ENST00000522243 MUC12Q9UKN1 5478 aa8.81□□□□□ -1
SDCBP-209ENST00000522243 MT-ATP8P03928 68 aa8.74□□□□□ -1.01
SDCBP-209ENST00000522243 KRTAP20-1Q3LI63 56 aa8.73□□□□□ -1.01
SDCBP-209ENST00000522243 P0C880 135 aa8.71□□□□□ -1.02
SDCBP-209ENST00000522243 MT1XP80297 61 aa8.7□□□□□ -1.02
SDCBP-209ENST00000522243 PLAC4Q8WY50 150 aa8.7□□□□□ -1.02
SDCBP-209ENST00000522243 PRO2289Q9P1D8 64 aa8.69□□□□□ -1.02
SDCBP-209ENST00000522243 SCGB1A1P11684 91 aa8.68□□□□□ -1.02
SDCBP-209ENST00000522243 R4GN34 69 aa8.68□□□□□ -1.02
SDCBP-209ENST00000522243 H3BPC8 53 aa8.67□□□□□ -1.02
SDCBP-209ENST00000522243 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
SDCBP-209ENST00000522243 M0QZ58 72 aa8.63□□□□□ -1.03
SDCBP-209ENST00000522243 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
SDCBP-209ENST00000522243 KMT2DO14686 5537 aa8.61□□□□□ -1.03
SDCBP-209ENST00000522243 SPRR2FQ96RM1 72 aa8.6□□□□□ -1.03
SDCBP-209ENST00000522243 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
SDCBP-209ENST00000522243 LINC01554Q52M75 96 aa8.55□□□□□ -1.04
SDCBP-209ENST00000522243 KRTAP8-1Q8IUC2 63 aa8.52□□□□□ -1.05
SDCBP-209ENST00000522243 SPRR2EP22531 72 aa8.51□□□□□ -1.05
SDCBP-209ENST00000522243 SPRR2BP35325 72 aa8.51□□□□□ -1.05
SDCBP-209ENST00000522243 SPRR2AP35326 72 aa8.51□□□□□ -1.05
SDCBP-209ENST00000522243 MDN1Q9NU22 5596 aa8.5□□□□□ -1.05
SDCBP-209ENST00000522243 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
SDCBP-209ENST00000522243 SMIM20Q8N5G0 67 aa8.46□□□□□ -1.06
SDCBP-209ENST00000522243 TRAV7A0A075B6U4 112 aa8.45□□□□□ -1.06
SDCBP-209ENST00000522243 KRTAP2-3P0C7H8 128 aa8.45□□□□□ -1.06
SDCBP-209ENST00000522243 ANAPC13Q9BS18 74 aa8.45□□□□□ -1.06
SDCBP-209ENST00000522243 KRTAP2-4Q9BYR9 128 aa8.45□□□□□ -1.06
SDCBP-209ENST00000522243 KRTAP4-8A0A0G2JLE6 195 aa8.42□□□□□ -1.06
SDCBP-209ENST00000522243 ACYP2P14621 99 aa8.42□□□□□ -1.06
SDCBP-209ENST00000522243 PCP4P48539 62 aa8.42□□□□□ -1.06
SDCBP-209ENST00000522243 KRTAP4-8Q9BYQ9 185 aa8.42□□□□□ -1.06
SDCBP-209ENST00000522243 LCE1AQ5T7P2 110 aa8.36□□□□□ -1.07
SDCBP-209ENST00000522243 SERP2Q8N6R1 65 aa8.34□□□□□ -1.07
SDCBP-209ENST00000522243 KRTAP10-7P60409 375 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-209ENST00000522243 SPTSSBQ8NFR3 76 aa8.32□□□□□ -1.08
SDCBP-209ENST00000522243 COX7CP15954 63 aa8.3□□□□□ -1.08
SDCBP-209ENST00000522243 CHKB-CPT1BH3BT56 60 aa8.29□□□□□ -1.08
SDCBP-209ENST00000522243 KRTAP10-12P60413 245 aa8.25□□□□□ -1.09
SDCBP-209ENST00000522243 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
SDCBP-209ENST00000522243 SPRR2DP22532 72 aa8.22□□□□□ -1.09
SDCBP-209ENST00000522243 KRTAP2-2Q9BYT5 123 aa8.18□□□□□ -1.1
SDCBP-209ENST00000522243 KRTAP2-1Q9BYU5 128 aa8.18□□□□□ -1.1
SDCBP-209ENST00000522243 CCDC179H3BU77 68 aa8.17□□□□□ -1.1
SDCBP-209ENST00000522243 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
SDCBP-209ENST00000522243 SPANXA2-OT1Q8N9U9 137 aa8.08□□□□□ -1.12
SDCBP-209ENST00000522243 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
SDCBP-209ENST00000522243 TMEM258P61165 79 aa7.98□□□□□ -1.13
SDCBP-209ENST00000522243 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
SDCBP-209ENST00000522243 H7BZZ5 65 aa7.95□□□□□ -1.14
SDCBP-209ENST00000522243 ATP5EP56381 51 aaPredicted RBP7.93□□□□□ -1.14
SDCBP-209ENST00000522243 COA5Q86WW8 74 aa7.91□□□□□ -1.14
SDCBP-209ENST00000522243 CYSTM1Q9H1C7 97 aa7.91□□□□□ -1.14
SDCBP-209ENST00000522243 A0A0D9SG42 100 aa7.84□□□□□ -1.15
SDCBP-209ENST00000522243 SEC61GP60059 68 aa7.81□□□□□ -1.16
SDCBP-209ENST00000522243 SERP1Q9Y6X1 66 aa7.81□□□□□ -1.16
SDCBP-209ENST00000522243 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
SDCBP-209ENST00000522243 KRTAP19-7Q3SYF9 63 aa7.78□□□□□ -1.16
SDCBP-209ENST00000522243 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
SDCBP-209ENST00000522243 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
SDCBP-209ENST00000522243 MT1EP04732 61 aa7.72□□□□□ -1.17
SDCBP-209ENST00000522243 A0A1B0GU33 70 aa7.7□□□□□ -1.18
SDCBP-209ENST00000522243 LCE5AQ5TCM9 118 aa7.7□□□□□ -1.18
SDCBP-209ENST00000522243 KRTAP19-3Q7Z4W3 81 aa7.68□□□□□ -1.18
SDCBP-209ENST00000522243 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
SDCBP-209ENST00000522243 KRTAP19-5Q3LI72 72 aa7.57□□□□□ -1.2
SDCBP-209ENST00000522243 SMIM26A0A096LP01 95 aa7.55□□□□□ -1.2
SDCBP-209ENST00000522243 DSTQ03001 7570 aaKnown RBP7.54□□□□□ -1.2
SDCBP-209ENST00000522243 KRTAP4-9Q9BYQ8 210 aa7.52□□□□□ -1.21
SDCBP-209ENST00000522243 A0A1B0GU69 56 aa7.51□□□□□ -1.21
SDCBP-209ENST00000522243 A8MU10 97 aa7.48□□□□□ -1.21
SDCBP-209ENST00000522243 MT1GP13640 62 aa7.47□□□□□ -1.21
SDCBP-209ENST00000522243 V9GYY9 64 aa7.46□□□□□ -1.22
SDCBP-209ENST00000522243 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
SDCBP-209ENST00000522243 Q1T7F1 81 aa7.37□□□□□ -1.23
SDCBP-209ENST00000522243 MT1MQ8N339 61 aa7.36□□□□□ -1.23
SDCBP-209ENST00000522243 MT1LQ93083 61 aa7.36□□□□□ -1.23
SDCBP-209ENST00000522243 LCE3AQ5TA76 89 aa7.34□□□□□ -1.23
SDCBP-209ENST00000522243 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms