RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 H0Y9P7 68 aa9.63□□□□□ -0.87
HOXA3-204ENST00000521401 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
HOXA3-204ENST00000521401 Q5VV11 94 aa9.61□□□□□ -0.87
HOXA3-204ENST00000521401 ATOX1O00244 68 aa9.6□□□□□ -0.87
HOXA3-204ENST00000521401 KRTAP6-3Q3LI67 103 aa9.56□□□□□ -0.88
HOXA3-204ENST00000521401 A0A1B0GV90 55 aa9.54□□□□□ -0.88
HOXA3-204ENST00000521401 A6NN06 94 aa9.53□□□□□ -0.88
HOXA3-204ENST00000521401 LINC00208Q96KT6 92 aa9.48□□□□□ -0.89
HOXA3-204ENST00000521401 OCR1Q9BZK8 76 aa9.48□□□□□ -0.89
HOXA3-204ENST00000521401 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
HOXA3-204ENST00000521401 CRIPTQ9P021 101 aa9.48□□□□□ -0.89
HOXA3-204ENST00000521401 NDUFC1O43677 76 aa9.47□□□□□ -0.89
HOXA3-204ENST00000521401 KRTAP10-5P60370 271 aa9.46□□□□□ -0.9
HOXA3-204ENST00000521401 A8MUN3 132 aa9.45□□□□□ -0.9
HOXA3-204ENST00000521401 H0YAA0 97 aa9.44□□□□□ -0.9
HOXA3-204ENST00000521401 MP68P56378 58 aa9.39□□□□□ -0.91
HOXA3-204ENST00000521401 ADM2Q7Z4H4 148 aa9.33□□□□□ -0.92
HOXA3-204ENST00000521401 NEBP20929 6669 aa9.32□□□□□ -0.92
HOXA3-204ENST00000521401 J3QR89 54 aa9.29□□□□□ -0.92
HOXA3-204ENST00000521401 MUC12Q9UKN1 5478 aa9.28□□□□□ -0.92
HOXA3-204ENST00000521401 H3BPC8 53 aa9.27□□□□□ -0.93
HOXA3-204ENST00000521401 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
HOXA3-204ENST00000521401 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
HOXA3-204ENST00000521401 P0C880 135 aa9.15□□□□□ -0.94
HOXA3-204ENST00000521401 KRTAP5-9P26371 169 aa9.13□□□□□ -0.95
HOXA3-204ENST00000521401 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
HOXA3-204ENST00000521401 MT1XP80297 61 aa9.08□□□□□ -0.96
HOXA3-204ENST00000521401 R4GN34 69 aa9.06□□□□□ -0.96
HOXA3-204ENST00000521401 MT-ATP8P03928 68 aa9.05□□□□□ -0.96
HOXA3-204ENST00000521401 KMT2DO14686 5537 aa9.05□□□□□ -0.96
HOXA3-204ENST00000521401 C20orf197Q8N268 126 aa9.04□□□□□ -0.96
HOXA3-204ENST00000521401 PLAC4Q8WY50 150 aa9.02□□□□□ -0.97
HOXA3-204ENST00000521401 M0QZ58 72 aa9□□□□□ -0.97
HOXA3-204ENST00000521401 PRO2289Q9P1D8 64 aa9□□□□□ -0.97
HOXA3-204ENST00000521401 MDN1Q9NU22 5596 aa8.99□□□□□ -0.97
HOXA3-204ENST00000521401 TRAV7A0A075B6U4 112 aa8.98□□□□□ -0.97
HOXA3-204ENST00000521401 ACYP2P14621 99 aa8.94□□□□□ -0.98
HOXA3-204ENST00000521401 SMIM20Q8N5G0 67 aa8.93□□□□□ -0.98
HOXA3-204ENST00000521401 K7ERU9 68 aa8.92□□□□□ -0.98
HOXA3-204ENST00000521401 LINC01554Q52M75 96 aa8.86□□□□□ -0.99
HOXA3-204ENST00000521401 KRTAP12-2P59991 146 aa8.85□□□□□ -0.99
HOXA3-204ENST00000521401 KRTAP20-1Q3LI63 56 aa8.84□□□□□ -0.99
HOXA3-204ENST00000521401 SPTSSBQ8NFR3 76 aa8.8□□□□□ -1
HOXA3-204ENST00000521401 SPRR2FQ96RM1 72 aa8.8□□□□□ -1
HOXA3-204ENST00000521401 SNURFQ9Y675 71 aa8.8□□□□□ -1
HOXA3-204ENST00000521401 KRTAP8-1Q8IUC2 63 aa8.76□□□□□ -1.01
HOXA3-204ENST00000521401 CHKB-CPT1BH3BT56 60 aa8.74□□□□□ -1.01
HOXA3-204ENST00000521401 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
HOXA3-204ENST00000521401 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.02
HOXA3-204ENST00000521401 SPANXA2-OT1Q8N9U9 137 aa8.69□□□□□ -1.02
HOXA3-204ENST00000521401 SPRR2EP22531 72 aa8.68□□□□□ -1.02
HOXA3-204ENST00000521401 SPRR2BP35325 72 aa8.68□□□□□ -1.02
HOXA3-204ENST00000521401 SPRR2AP35326 72 aa8.68□□□□□ -1.02
HOXA3-204ENST00000521401 KRTAP10-7P60409 375 aaPredicted RBP8.67□□□□□ -1.02
HOXA3-204ENST00000521401 SERP2Q8N6R1 65 aa8.64□□□□□ -1.03
HOXA3-204ENST00000521401 KRTAP10-12P60413 245 aa8.62□□□□□ -1.03
HOXA3-204ENST00000521401 KRTAP2-3P0C7H8 128 aa8.61□□□□□ -1.03
HOXA3-204ENST00000521401 LCE1AQ5T7P2 110 aa8.61□□□□□ -1.03
HOXA3-204ENST00000521401 KRTAP2-4Q9BYR9 128 aa8.61□□□□□ -1.03
HOXA3-204ENST00000521401 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
HOXA3-204ENST00000521401 COA5Q86WW8 74 aa8.45□□□□□ -1.06
HOXA3-204ENST00000521401 SPRR2DP22532 72 aa8.39□□□□□ -1.07
HOXA3-204ENST00000521401 COX7CP15954 63 aa8.36□□□□□ -1.07
HOXA3-204ENST00000521401 KRTAP2-2Q9BYT5 123 aa8.34□□□□□ -1.07
HOXA3-204ENST00000521401 KRTAP2-1Q9BYU5 128 aa8.34□□□□□ -1.07
HOXA3-204ENST00000521401 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
HOXA3-204ENST00000521401 CYSTM1Q9H1C7 97 aa8.31□□□□□ -1.08
HOXA3-204ENST00000521401 H7BZZ5 65 aa8.28□□□□□ -1.08
HOXA3-204ENST00000521401 SERP1Q9Y6X1 66 aa8.26□□□□□ -1.09
HOXA3-204ENST00000521401 SEC61GP60059 68 aa8.25□□□□□ -1.09
HOXA3-204ENST00000521401 A0A0D9SG42 100 aa8.22□□□□□ -1.09
HOXA3-204ENST00000521401 SPATA8Q6RVD6 105 aa8.21□□□□□ -1.1
HOXA3-204ENST00000521401 LCE3BQ5TA77 95 aa8.18□□□□□ -1.1
HOXA3-204ENST00000521401 A0A1B0GU33 70 aa8.17□□□□□ -1.1
HOXA3-204ENST00000521401 KRTAP19-7Q3SYF9 63 aa8.13□□□□□ -1.11
HOXA3-204ENST00000521401 KRTAP12-1P59990 96 aa8.1□□□□□ -1.11
HOXA3-204ENST00000521401 SPINT4Q6UDR6 99 aa8.1□□□□□ -1.11
HOXA3-204ENST00000521401 MT1EP04732 61 aa8.05□□□□□ -1.12
HOXA3-204ENST00000521401 LCE5AQ5TCM9 118 aa8.01□□□□□ -1.13
HOXA3-204ENST00000521401 ANAPC13Q9BS18 74 aa8□□□□□ -1.13
HOXA3-204ENST00000521401 A0A1B0GU69 56 aa7.99□□□□□ -1.13
HOXA3-204ENST00000521401 KRTAP19-3Q7Z4W3 81 aa7.97□□□□□ -1.13
HOXA3-204ENST00000521401 SMIM26A0A096LP01 95 aa7.92□□□□□ -1.14
HOXA3-204ENST00000521401 A8MU10 97 aa7.92□□□□□ -1.14
HOXA3-204ENST00000521401 CCDC179H3BU77 68 aa7.91□□□□□ -1.14
HOXA3-204ENST00000521401 DSTQ03001 7570 aaKnown RBP7.89□□□□□ -1.15
HOXA3-204ENST00000521401 KRTAP19-5Q3LI72 72 aa7.89□□□□□ -1.15
HOXA3-204ENST00000521401 SVIPQ8NHG7 77 aa7.88□□□□□ -1.15
HOXA3-204ENST00000521401 MT1GP13640 62 aa7.77□□□□□ -1.17
HOXA3-204ENST00000521401 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
HOXA3-204ENST00000521401 ATP5EP56381 51 aaPredicted RBP7.76□□□□□ -1.17
HOXA3-204ENST00000521401 PRR15LQ9BU68 103 aa7.7□□□□□ -1.18
HOXA3-204ENST00000521401 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
HOXA3-204ENST00000521401 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
HOXA3-204ENST00000521401 TNP1P09430 55 aa7.68□□□□□ -1.18
HOXA3-204ENST00000521401 MT1LQ93083 61 aa7.68□□□□□ -1.18
HOXA3-204ENST00000521401 PP632Q6XCG6 107 aa7.65□□□□□ -1.18
HOXA3-204ENST00000521401 MT1MQ8N339 61 aa7.65□□□□□ -1.18
HOXA3-204ENST00000521401 KRTAP4-9Q9BYQ8 210 aa7.63□□□□□ -1.19
HOXA3-204ENST00000521401 TMEM258P61165 79 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms