RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 USP34Q70CQ2 3546 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 LRBAP50851 2863 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 H3BUA1 57 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 NDUFA1O15239 70 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 TNP1P09430 55 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 RPL39P62891 51 aaKnown RBP-0.04□□□□□ -2.42
PCM1-214ENST00000521338 SERF2P84101 59 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 NOP10Q9NPE3 64 aaKnown RBP-0.04□□□□□ -2.42
PCM1-214ENST00000521338 C5orf42Q9H799 3197 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 ABCC8Q09428 1581 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 TEX15Q9BXT5 2789 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 RNF213Q63HN8 5207 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 SYCP2Q9BX26 1530 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 SONP18583 2426 aaKnown RBP-0.04□□□□□ -2.42
PCM1-214ENST00000521338 DMXL2Q8TDJ6 3036 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 PCLOQ9Y6V0 5065 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 C2CD3Q4AC94 2353 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 MACF1Q9UPN3 7388 aaKnown RBP-0.04□□□□□ -2.42
PCM1-214ENST00000521338 FLNAP21333 2647 aaKnown RBP-0.04□□□□□ -2.42
PCM1-214ENST00000521338 PLCE1Q9P212 2302 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 IQGAP1P46940 1657 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 KIAA1109Q2LD37 5005 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 FRYLO94915 3013 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 ADCY10Q96PN6 1610 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 NRXN3Q9Y4C0 1643 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 ABCA2Q9BZC7 2435 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 SPTBN2O15020 2390 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 LAMA2P24043 3122 aaKnown RBP-0.05□□□□□ -2.42
PCM1-214ENST00000521338 PCNX1Q96RV3 2341 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 USP9YO00507 2555 aaPredicted RBP-0.05□□□□□ -2.42
PCM1-214ENST00000521338 SPTBN4Q9H254 2564 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 M0QY20 66 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 MT1GP13640 62 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 MT4P47944 62 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 DEFB131AP59861 70 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 MT1HP80294 61 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 DEFB104AQ8WTQ1 72 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 LEAP2Q969E1 77 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 RPL39LQ96EH5 51 aaKnown RBP-0.05□□□□□ -2.42
PCM1-214ENST00000521338 ANKRD36CQ5JPF3 1778 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 WNK2Q9Y3S1 2297 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 FASNP49327 2511 aaKnown RBP-0.05□□□□□ -2.42
PCM1-214ENST00000521338 GOLGA4Q13439 2230 aaKnown RBP-0.05□□□□□ -2.42
PCM1-214ENST00000521338 CDC42BPAQ5VT25 1732 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 EYSQ5T1H1 3165 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 RYR3Q15413 4870 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 ACANP16112 2415 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 ATMQ13315 3056 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 STAB2Q8WWQ8 2551 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 CHD8Q9HCK8 2581 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 AKAP6Q13023 2319 aa-0.05□□□□□ -2.42
PCM1-214ENST00000521338 ITPR2Q14571 2701 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 HYDINQ4G0P3 5121 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 NCOR1O75376 2440 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 CREBBPQ92793 2442 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 PRUNE2Q8WUY3 3088 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 TRPM2O94759 1503 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 TOP2AP11388 1531 aaKnown RBP-0.06□□□□□ -2.42
PCM1-214ENST00000521338 SPTBN1Q01082 2364 aaKnown RBP-0.06□□□□□ -2.42
PCM1-214ENST00000521338 MYO18BQ8IUG5 2567 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 M0QZ58 72 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 MT1EP04732 61 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 SPART-AS1P0CW21 52 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 DEFB1P60022 68 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 MT1XP80297 61 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 MT1LQ93083 61 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 ABCA13Q86UQ4 5058 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 CFAP46Q8IYW2 2715 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 LAMA3Q16787 3333 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 DOPEY2Q9Y3R5 2298 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 SRCAPQ6ZRS2 3230 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 A0A1B0GUL6 1792 aa-0.06□□□□□ -2.42
PCM1-214ENST00000521338 CSPG4Q6UVK1 2322 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 BOD1L1Q8NFC6 3051 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 DDX60Q8IY21 1712 aaKnown RBP-0.07□□□□□ -2.42
PCM1-214ENST00000521338 MAP1BP46821 2468 aaKnown RBP-0.07□□□□□ -2.42
PCM1-214ENST00000521338 PKDREJQ9NTG1 2253 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 COL6A5A8TX70 2615 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 FAM208AQ9UK61 1670 aaKnown RBP-0.07□□□□□ -2.42
PCM1-214ENST00000521338 RYR2Q92736 4967 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 ASPMQ8IZT6 3477 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 CNOT1A5YKK6 2376 aaKnown RBP-0.07□□□□□ -2.42
PCM1-214ENST00000521338 DEFB4AO15263 64 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 SNRPGP62308 76 aaKnown RBP-0.07□□□□□ -2.42
PCM1-214ENST00000521338 TOMM7Q9P0U1 55 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 KNL1Q8NG31 2342 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 PKD1L2Q7Z442 2459 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 DNAH14Q0VDD8 3507 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 MUC3AQ02505 3323 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 IQGAP2Q13576 1575 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 SAMD9LQ8IVG5 1584 aa-0.07□□□□□ -2.42
PCM1-214ENST00000521338 MKI67P46013 3256 aaKnown RBP-0.07□□□□□ -2.42
PCM1-214ENST00000521338 DSTQ03001 7570 aaKnown RBP-0.07□□□□□ -2.42
PCM1-214ENST00000521338 ATP7AQ04656 1500 aa-0.08□□□□□ -2.42
PCM1-214ENST00000521338 MGAM2Q2M2H8 2515 aa-0.08□□□□□ -2.42
PCM1-214ENST00000521338 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.08□□□□□ -2.42
PCM1-214ENST00000521338 ACACBO00763 2458 aa-0.08□□□□□ -2.42
PCM1-214ENST00000521338 PTPN13Q12923 2485 aa-0.08□□□□□ -2.42
PCM1-214ENST00000521338 EPG5Q9HCE0 2579 aa-0.08□□□□□ -2.42
PCM1-214ENST00000521338 A0A096LNI7 61 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms