RNA–Protein interactions for RNA: ENST00000520495.5

MTCL1-209, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 2

Gene MTCL1, Length 3,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-209ENST00000520495 C10orf95Q9H7T3 257 aa8.16□□□□□ -1.1
MTCL1-209ENST00000520495 A0A0D9SG42 100 aa8.15□□□□□ -1.11
MTCL1-209ENST00000520495 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
MTCL1-209ENST00000520495 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
MTCL1-209ENST00000520495 RPS29P62273 56 aaKnown RBP8.13□□□□□ -1.11
MTCL1-209ENST00000520495 KRTAP10-6P60371 365 aaPredicted RBP8.12□□□□□ -1.11
MTCL1-209ENST00000520495 KMT2CQ8NEZ4 4911 aaKnown RBP8.12□□□□□ -1.11
MTCL1-209ENST00000520495 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
MTCL1-209ENST00000520495 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
MTCL1-209ENST00000520495 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
MTCL1-209ENST00000520495 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
MTCL1-209ENST00000520495 S4R3F8 94 aa7.97□□□□□ -1.13
MTCL1-209ENST00000520495 MYCBP2O75592 4640 aa7.96□□□□□ -1.14
MTCL1-209ENST00000520495 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
MTCL1-209ENST00000520495 RYR2Q92736 4967 aa7.9□□□□□ -1.14
MTCL1-209ENST00000520495 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
MTCL1-209ENST00000520495 PKHD1L1Q86WI1 4243 aa7.85□□□□□ -1.15
MTCL1-209ENST00000520495 XP32Q5T750 250 aa7.81□□□□□ -1.16
MTCL1-209ENST00000520495 KRTAP12-1P59990 96 aa7.81□□□□□ -1.16
MTCL1-209ENST00000520495 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
MTCL1-209ENST00000520495 KIAA1109Q2LD37 5005 aa7.78□□□□□ -1.16
MTCL1-209ENST00000520495 RYR3Q15413 4870 aa7.78□□□□□ -1.16
MTCL1-209ENST00000520495 Q5VSD8 79 aa7.76□□□□□ -1.17
MTCL1-209ENST00000520495 FAT3Q8TDW7 4589 aa7.76□□□□□ -1.17
MTCL1-209ENST00000520495 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
MTCL1-209ENST00000520495 HSPG2P98160 4391 aa7.69□□□□□ -1.18
MTCL1-209ENST00000520495 J3QL48 77 aa7.65□□□□□ -1.18
MTCL1-209ENST00000520495 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
MTCL1-209ENST00000520495 M0QZ58 72 aa7.6□□□□□ -1.19
MTCL1-209ENST00000520495 LUZP6Q538Z0 58 aa7.6□□□□□ -1.19
MTCL1-209ENST00000520495 RYR1P21817 5038 aa7.59□□□□□ -1.19
MTCL1-209ENST00000520495 TNXBP22105 4242 aa7.57□□□□□ -1.2
MTCL1-209ENST00000520495 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
MTCL1-209ENST00000520495 EPPK1P58107 5090 aaKnown RBP7.55□□□□□ -1.2
MTCL1-209ENST00000520495 LPAP08519 4548 aa7.53□□□□□ -1.2
MTCL1-209ENST00000520495 LRP2P98164 4655 aa7.51□□□□□ -1.21
MTCL1-209ENST00000520495 ABCA13Q86UQ4 5058 aa7.44□□□□□ -1.22
MTCL1-209ENST00000520495 MT1HL1P0DM35 61 aa7.38□□□□□ -1.23
MTCL1-209ENST00000520495 KRTAP4-5Q9BYR2 181 aa7.37□□□□□ -1.23
MTCL1-209ENST00000520495 R4GN34 69 aa7.32□□□□□ -1.24
MTCL1-209ENST00000520495 MUC2Q02817 5179 aa7.19□□□□□ -1.26
MTCL1-209ENST00000520495 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
MTCL1-209ENST00000520495 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
MTCL1-209ENST00000520495 HERC2O95714 4834 aa7.14□□□□□ -1.27
MTCL1-209ENST00000520495 SEC61BP60468 96 aaKnown RBP7.1□□□□□ -1.27
MTCL1-209ENST00000520495 CAMK2N1Q7Z7J9 78 aa7.02□□□□□ -1.29
MTCL1-209ENST00000520495 BIRC6Q9NR09 4857 aa7□□□□□ -1.29
MTCL1-209ENST00000520495 HERC1Q15751 4861 aa6.97□□□□□ -1.29
MTCL1-209ENST00000520495 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
MTCL1-209ENST00000520495 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
MTCL1-209ENST00000520495 MUC17Q685J3 4493 aa6.83□□□□□ -1.32
MTCL1-209ENST00000520495 FAT4Q6V0I7 4981 aa6.83□□□□□ -1.32
MTCL1-209ENST00000520495 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
MTCL1-209ENST00000520495 TNP1P09430 55 aa6.81□□□□□ -1.32
MTCL1-209ENST00000520495 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
MTCL1-209ENST00000520495 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
MTCL1-209ENST00000520495 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
MTCL1-209ENST00000520495 KRTAP19-2Q3LHN2 52 aa6.62□□□□□ -1.35
MTCL1-209ENST00000520495 UBR4Q5T4S7 5183 aa6.62□□□□□ -1.35
MTCL1-209ENST00000520495 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
MTCL1-209ENST00000520495 M0R2T5 61 aa6.56□□□□□ -1.36
MTCL1-209ENST00000520495 FLGP20930 4061 aaPredicted RBP6.53□□□□□ -1.36
MTCL1-209ENST00000520495 INE1O15225 51 aa6.52□□□□□ -1.37
MTCL1-209ENST00000520495 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
MTCL1-209ENST00000520495 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
MTCL1-209ENST00000520495 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
MTCL1-209ENST00000520495 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
MTCL1-209ENST00000520495 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.41
MTCL1-209ENST00000520495 MT1HP80294 61 aa6.21□□□□□ -1.42
MTCL1-209ENST00000520495 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.42
MTCL1-209ENST00000520495 MT1FP04733 61 aa6.14□□□□□ -1.43
MTCL1-209ENST00000520495 MT2AP02795 61 aa6.09□□□□□ -1.43
MTCL1-209ENST00000520495 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
MTCL1-209ENST00000520495 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
MTCL1-209ENST00000520495 USH2AO75445 5202 aa6.05□□□□□ -1.44
MTCL1-209ENST00000520495 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
MTCL1-209ENST00000520495 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
MTCL1-209ENST00000520495 MT1XP80297 61 aa5.89□□□□□ -1.47
MTCL1-209ENST00000520495 KMT2DO14686 5537 aa5.87□□□□□ -1.47
MTCL1-209ENST00000520495 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
MTCL1-209ENST00000520495 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
MTCL1-209ENST00000520495 MT1BP07438 61 aa5.82□□□□□ -1.48
MTCL1-209ENST00000520495 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
MTCL1-209ENST00000520495 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
MTCL1-209ENST00000520495 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
MTCL1-209ENST00000520495 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
MTCL1-209ENST00000520495 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
MTCL1-209ENST00000520495 LCE2BO14633 110 aa5.63□□□□□ -1.51
MTCL1-209ENST00000520495 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
MTCL1-209ENST00000520495 KRTAP2-3P0C7H8 128 aa5.57□□□□□ -1.52
MTCL1-209ENST00000520495 KRTAP2-4Q9BYR9 128 aa5.57□□□□□ -1.52
MTCL1-209ENST00000520495 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
MTCL1-209ENST00000520495 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
MTCL1-209ENST00000520495 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
MTCL1-209ENST00000520495 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
MTCL1-209ENST00000520495 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
MTCL1-209ENST00000520495 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
MTCL1-209ENST00000520495 MUC12Q9UKN1 5478 aa5.21□□□□□ -1.58
MTCL1-209ENST00000520495 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
MTCL1-209ENST00000520495 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms