RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
CSMD1-207ENST00000520451 KRTAP19-8Q3LI54 63 aa6.81□□□□□ -1.32
CSMD1-207ENST00000520451 SPRR2GQ9BYE4 73 aa6.81□□□□□ -1.32
CSMD1-207ENST00000520451 RPS28P62857 69 aaKnown RBP6.8□□□□□ -1.32
CSMD1-207ENST00000520451 NEBP20929 6669 aa6.8□□□□□ -1.32
CSMD1-207ENST00000520451 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
CSMD1-207ENST00000520451 ATP5EP2Q5VTU8 51 aa6.76□□□□□ -1.33
CSMD1-207ENST00000520451 V9GYY9 64 aa6.76□□□□□ -1.33
CSMD1-207ENST00000520451 MUC12Q9UKN1 5478 aa6.75□□□□□ -1.33
CSMD1-207ENST00000520451 TP53AIP1Q9HCN2 124 aa6.75□□□□□ -1.33
CSMD1-207ENST00000520451 KRTAP10-5P60370 271 aa6.74□□□□□ -1.33
CSMD1-207ENST00000520451 KLKP1Q107X0 134 aa6.74□□□□□ -1.33
CSMD1-207ENST00000520451 PRO0628Q9UI54 55 aa6.71□□□□□ -1.34
CSMD1-207ENST00000520451 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
CSMD1-207ENST00000520451 IMUPQ9GZP8 106 aa6.7□□□□□ -1.34
CSMD1-207ENST00000520451 CYP4F30PQ9H0H9 118 aa6.66□□□□□ -1.34
CSMD1-207ENST00000520451 A0A087WVE0 104 aa6.64□□□□□ -1.35
CSMD1-207ENST00000520451 HIST1H4AP62805 103 aaKnown RBP6.63□□□□□ -1.35
CSMD1-207ENST00000520451 CRIPTQ9P021 101 aa6.63□□□□□ -1.35
CSMD1-207ENST00000520451 CCDC179H3BU77 68 aa6.61□□□□□ -1.35
CSMD1-207ENST00000520451 KRTAP5-9P26371 169 aa6.61□□□□□ -1.35
CSMD1-207ENST00000520451 KRTAP20-1Q3LI63 56 aa6.61□□□□□ -1.35
CSMD1-207ENST00000520451 TRAV22A0A0B4J277 110 aa6.6□□□□□ -1.35
CSMD1-207ENST00000520451 KMT2DO14686 5537 aa6.58□□□□□ -1.36
CSMD1-207ENST00000520451 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
CSMD1-207ENST00000520451 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
CSMD1-207ENST00000520451 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
CSMD1-207ENST00000520451 UQCRQO14949 82 aa6.53□□□□□ -1.36
CSMD1-207ENST00000520451 NDUFC1O43677 76 aa6.52□□□□□ -1.37
CSMD1-207ENST00000520451 H0YAA0 97 aa6.5□□□□□ -1.37
CSMD1-207ENST00000520451 TMEM258P61165 79 aa6.5□□□□□ -1.37
CSMD1-207ENST00000520451 ATOX1O00244 68 aa6.48□□□□□ -1.37
CSMD1-207ENST00000520451 H0Y9P7 68 aa6.47□□□□□ -1.37
CSMD1-207ENST00000520451 OCR1Q9BZK8 76 aa6.47□□□□□ -1.37
CSMD1-207ENST00000520451 ADM2Q7Z4H4 148 aa6.45□□□□□ -1.38
CSMD1-207ENST00000520451 A8MUN3 132 aa6.44□□□□□ -1.38
CSMD1-207ENST00000520451 TRAV7A0A075B6U4 112 aa6.42□□□□□ -1.38
CSMD1-207ENST00000520451 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
CSMD1-207ENST00000520451 SERP2Q8N6R1 65 aa6.41□□□□□ -1.38
CSMD1-207ENST00000520451 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
CSMD1-207ENST00000520451 COX7CP15954 63 aa6.38□□□□□ -1.39
CSMD1-207ENST00000520451 MT1XP80297 61 aa6.38□□□□□ -1.39
CSMD1-207ENST00000520451 KRTAP2-3P0C7H8 128 aa6.37□□□□□ -1.39
CSMD1-207ENST00000520451 KRTAP2-4Q9BYR9 128 aa6.37□□□□□ -1.39
CSMD1-207ENST00000520451 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
CSMD1-207ENST00000520451 SPRR2EP22531 72 aa6.35□□□□□ -1.39
CSMD1-207ENST00000520451 SPRR2BP35325 72 aa6.35□□□□□ -1.39
CSMD1-207ENST00000520451 SPRR2AP35326 72 aa6.35□□□□□ -1.39
CSMD1-207ENST00000520451 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
CSMD1-207ENST00000520451 LINC00208Q96KT6 92 aa6.34□□□□□ -1.39
CSMD1-207ENST00000520451 KRTAP8-1Q8IUC2 63 aa6.31□□□□□ -1.4
CSMD1-207ENST00000520451 R4GN34 69 aa6.31□□□□□ -1.4
CSMD1-207ENST00000520451 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
CSMD1-207ENST00000520451 SMIM26A0A096LP01 95 aa6.29□□□□□ -1.4
CSMD1-207ENST00000520451 MP68P56378 58 aa6.28□□□□□ -1.4
CSMD1-207ENST00000520451 H3BPC8 53 aa6.27□□□□□ -1.41
CSMD1-207ENST00000520451 P0C880 135 aa6.27□□□□□ -1.41
CSMD1-207ENST00000520451 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
CSMD1-207ENST00000520451 KRTAP12-2P59991 146 aa6.26□□□□□ -1.41
CSMD1-207ENST00000520451 M0QZ58 72 aa6.25□□□□□ -1.41
CSMD1-207ENST00000520451 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
CSMD1-207ENST00000520451 SNURFQ9Y675 71 aa6.24□□□□□ -1.41
CSMD1-207ENST00000520451 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
CSMD1-207ENST00000520451 ATP5EP56381 51 aaPredicted RBP6.22□□□□□ -1.41
CSMD1-207ENST00000520451 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
CSMD1-207ENST00000520451 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
CSMD1-207ENST00000520451 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
CSMD1-207ENST00000520451 H7BZZ5 65 aa6.17□□□□□ -1.42
CSMD1-207ENST00000520451 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
CSMD1-207ENST00000520451 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
CSMD1-207ENST00000520451 KRTAP2-2Q9BYT5 123 aa6.16□□□□□ -1.42
CSMD1-207ENST00000520451 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
CSMD1-207ENST00000520451 SPRR2DP22532 72 aa6.15□□□□□ -1.42
CSMD1-207ENST00000520451 H3BS24 57 aa6.12□□□□□ -1.43
CSMD1-207ENST00000520451 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
CSMD1-207ENST00000520451 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
CSMD1-207ENST00000520451 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
CSMD1-207ENST00000520451 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
CSMD1-207ENST00000520451 ACYP2P14621 99 aa5.98□□□□□ -1.45
CSMD1-207ENST00000520451 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
CSMD1-207ENST00000520451 SPTSSBQ8NFR3 76 aa5.96□□□□□ -1.46
CSMD1-207ENST00000520451 Q1T7F1 81 aa5.9□□□□□ -1.46
CSMD1-207ENST00000520451 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
CSMD1-207ENST00000520451 COA5Q86WW8 74 aa5.87□□□□□ -1.47
CSMD1-207ENST00000520451 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
CSMD1-207ENST00000520451 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
CSMD1-207ENST00000520451 A0A0A0MQY5 61 aa5.71□□□□□ -1.5
CSMD1-207ENST00000520451 KRTAP19-7Q3SYF9 63 aa5.7□□□□□ -1.5
CSMD1-207ENST00000520451 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
CSMD1-207ENST00000520451 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
CSMD1-207ENST00000520451 GPR98Q8WXG9 6306 aa5.68□□□□□ -1.5
CSMD1-207ENST00000520451 MT1EP04732 61 aa5.67□□□□□ -1.5
CSMD1-207ENST00000520451 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
CSMD1-207ENST00000520451 PSPHP1O15172 72 aa5.65□□□□□ -1.5
CSMD1-207ENST00000520451 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
CSMD1-207ENST00000520451 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
CSMD1-207ENST00000520451 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
CSMD1-207ENST00000520451 A0A0D9SG42 100 aa5.6□□□□□ -1.51
CSMD1-207ENST00000520451 SPATA8Q6RVD6 105 aa5.53□□□□□ -1.52
CSMD1-207ENST00000520451 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms