RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
CTNNA1-215ENST00000519309 PRO0461Q9UI25 63 aa3.78□□□□□ -1.8
CTNNA1-215ENST00000519309 IGKV2D-30A0A075B6S6 120 aa3.77□□□□□ -1.81
CTNNA1-215ENST00000519309 IGKV2-30P06310 120 aa3.77□□□□□ -1.81
CTNNA1-215ENST00000519309 COL5A1-AS1Q5SY13 56 aa3.77□□□□□ -1.81
CTNNA1-215ENST00000519309 SPRR2EP22531 72 aa3.76□□□□□ -1.81
CTNNA1-215ENST00000519309 SPRR2BP35325 72 aa3.76□□□□□ -1.81
CTNNA1-215ENST00000519309 SPRR2AP35326 72 aa3.76□□□□□ -1.81
CTNNA1-215ENST00000519309 K7EP34 96 aa3.75□□□□□ -1.81
CTNNA1-215ENST00000519309 CASC2Q6XLA1 102 aa3.75□□□□□ -1.81
CTNNA1-215ENST00000519309 HCG22E2RYF7 251 aa3.74□□□□□ -1.81
CTNNA1-215ENST00000519309 C4orf26Q17RF5 130 aa3.73□□□□□ -1.81
CTNNA1-215ENST00000519309 C7orf65Q6ZTY9 151 aa3.73□□□□□ -1.81
CTNNA1-215ENST00000519309 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
CTNNA1-215ENST00000519309 PCP4L1A6NKN8 68 aa3.72□□□□□ -1.81
CTNNA1-215ENST00000519309 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
CTNNA1-215ENST00000519309 FAM236AA0A1B0GUQ0 79 aa3.7□□□□□ -1.82
CTNNA1-215ENST00000519309 FAM236BA0A1B0GV22 79 aa3.7□□□□□ -1.82
CTNNA1-215ENST00000519309 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
CTNNA1-215ENST00000519309 CXCL6P80162 114 aa3.68□□□□□ -1.82
CTNNA1-215ENST00000519309 UBL5Q9BZL1 73 aa3.68□□□□□ -1.82
CTNNA1-215ENST00000519309 ETDBQ3ZM63 59 aa3.67□□□□□ -1.82
CTNNA1-215ENST00000519309 GTF2H5Q6ZYL4 71 aa3.67□□□□□ -1.82
CTNNA1-215ENST00000519309 C5orf47Q569G3 176 aa3.66□□□□□ -1.82
CTNNA1-215ENST00000519309 F8W1H4 67 aa3.64□□□□□ -1.83
CTNNA1-215ENST00000519309 SPRR2DP22532 72 aa3.64□□□□□ -1.83
CTNNA1-215ENST00000519309 KLKP1Q107X0 134 aa3.63□□□□□ -1.83
CTNNA1-215ENST00000519309 KRTAP15-1Q3LI76 137 aa3.63□□□□□ -1.83
CTNNA1-215ENST00000519309 LCA10Q71F78 164 aa3.63□□□□□ -1.83
CTNNA1-215ENST00000519309 IMUPQ9GZP8 106 aa3.63□□□□□ -1.83
CTNNA1-215ENST00000519309 A0A087WVE0 104 aa3.62□□□□□ -1.83
CTNNA1-215ENST00000519309 C1orf64Q8NEQ6 169 aa3.62□□□□□ -1.83
CTNNA1-215ENST00000519309 S4R3F8 94 aa3.61□□□□□ -1.83
CTNNA1-215ENST00000519309 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
CTNNA1-215ENST00000519309 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
CTNNA1-215ENST00000519309 TP53AIP1Q9HCN2 124 aa3.59□□□□□ -1.83
CTNNA1-215ENST00000519309 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
CTNNA1-215ENST00000519309 CSAG1Q6PB30 78 aa3.57□□□□□ -1.84
CTNNA1-215ENST00000519309 CYP4F30PQ9H0H9 118 aa3.57□□□□□ -1.84
CTNNA1-215ENST00000519309 CRIPTQ9P021 101 aa3.56□□□□□ -1.84
CTNNA1-215ENST00000519309 TRAV22A0A0B4J277 110 aa3.55□□□□□ -1.84
CTNNA1-215ENST00000519309 KRTAP12-2P59991 146 aa3.55□□□□□ -1.84
CTNNA1-215ENST00000519309 MT1XP80297 61 aa3.54□□□□□ -1.84
CTNNA1-215ENST00000519309 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
CTNNA1-215ENST00000519309 ACYP1P07311 99 aa3.53□□□□□ -1.84
CTNNA1-215ENST00000519309 A0A1B0GV90 55 aa3.52□□□□□ -1.85
CTNNA1-215ENST00000519309 FAM240AA0A1B0GVK7 77 aa3.52□□□□□ -1.85
CTNNA1-215ENST00000519309 HIST1H4AP62805 103 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-215ENST00000519309 LOC101927531A0A1B0GV80 90 aa3.51□□□□□ -1.85
CTNNA1-215ENST00000519309 ATP5EP2Q5VTU8 51 aa3.5□□□□□ -1.85
CTNNA1-215ENST00000519309 H0Y9P7 68 aa3.49□□□□□ -1.85
CTNNA1-215ENST00000519309 UQCRQO14949 82 aa3.48□□□□□ -1.85
CTNNA1-215ENST00000519309 LINC00643Q86TS7 51 aa3.47□□□□□ -1.85
CTNNA1-215ENST00000519309 ATOX1O00244 68 aa3.44□□□□□ -1.86
CTNNA1-215ENST00000519309 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
CTNNA1-215ENST00000519309 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
CTNNA1-215ENST00000519309 LINC00208Q96KT6 92 aa3.43□□□□□ -1.86
CTNNA1-215ENST00000519309 H0YAA0 97 aa3.42□□□□□ -1.86
CTNNA1-215ENST00000519309 NDUFC1O43677 76 aa3.42□□□□□ -1.86
CTNNA1-215ENST00000519309 ADM2Q7Z4H4 148 aa3.41□□□□□ -1.86
CTNNA1-215ENST00000519309 A8MUN3 132 aa3.4□□□□□ -1.87
CTNNA1-215ENST00000519309 P0C880 135 aa3.37□□□□□ -1.87
CTNNA1-215ENST00000519309 MP68P56378 58 aa3.37□□□□□ -1.87
CTNNA1-215ENST00000519309 PLAC4Q8WY50 150 aa3.37□□□□□ -1.87
CTNNA1-215ENST00000519309 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-215ENST00000519309 J3QR89 54 aa3.36□□□□□ -1.87
CTNNA1-215ENST00000519309 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
CTNNA1-215ENST00000519309 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
CTNNA1-215ENST00000519309 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
CTNNA1-215ENST00000519309 SCGB1A1P11684 91 aa3.33□□□□□ -1.88
CTNNA1-215ENST00000519309 H3BPC8 53 aa3.32□□□□□ -1.88
CTNNA1-215ENST00000519309 MT-ATP8P03928 68 aa3.32□□□□□ -1.88
CTNNA1-215ENST00000519309 M0QZ58 72 aa3.29□□□□□ -1.88
CTNNA1-215ENST00000519309 R4GN34 69 aa3.29□□□□□ -1.88
CTNNA1-215ENST00000519309 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
CTNNA1-215ENST00000519309 K7ERU9 68 aa3.27□□□□□ -1.89
CTNNA1-215ENST00000519309 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
CTNNA1-215ENST00000519309 LINC01554Q52M75 96 aa3.25□□□□□ -1.89
CTNNA1-215ENST00000519309 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
CTNNA1-215ENST00000519309 TRAV7A0A075B6U4 112 aa3.24□□□□□ -1.89
CTNNA1-215ENST00000519309 C20orf197Q8N268 126 aa3.24□□□□□ -1.89
CTNNA1-215ENST00000519309 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
CTNNA1-215ENST00000519309 SNURFQ9Y675 71 aa3.22□□□□□ -1.89
CTNNA1-215ENST00000519309 ACYP2P14621 99 aa3.21□□□□□ -1.9
CTNNA1-215ENST00000519309 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
CTNNA1-215ENST00000519309 SMIM20Q8N5G0 67 aa3.21□□□□□ -1.9
CTNNA1-215ENST00000519309 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
CTNNA1-215ENST00000519309 MT4P47944 62 aa3.19□□□□□ -1.9
CTNNA1-215ENST00000519309 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
CTNNA1-215ENST00000519309 MT1EP04732 61 aa3.16□□□□□ -1.9
CTNNA1-215ENST00000519309 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
CTNNA1-215ENST00000519309 CHKB-CPT1BH3BT56 60 aa3.15□□□□□ -1.91
CTNNA1-215ENST00000519309 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
CTNNA1-215ENST00000519309 SPTSSBQ8NFR3 76 aa3.14□□□□□ -1.91
CTNNA1-215ENST00000519309 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
CTNNA1-215ENST00000519309 SERP2Q8N6R1 65 aa3.13□□□□□ -1.91
CTNNA1-215ENST00000519309 SPANXA2-OT1Q8N9U9 137 aa3.12□□□□□ -1.91
CTNNA1-215ENST00000519309 MT1GP13640 62 aa3.07□□□□□ -1.92
CTNNA1-215ENST00000519309 COA5Q86WW8 74 aa3.07□□□□□ -1.92
CTNNA1-215ENST00000519309 COX7CP15954 63 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms