RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 NDUFA5Q16718 116 aa1.31□□□□□ -2.2
PABPC1-206ENST00000518293 SPRR2FQ96RM1 72 aa1.31□□□□□ -2.2
PABPC1-206ENST00000518293 TRBV7-4A0A0J9YYF1 115 aa1.3□□□□□ -2.2
PABPC1-206ENST00000518293 H0YGX0 51 aa1.3□□□□□ -2.2
PABPC1-206ENST00000518293 J3KT08 172 aa1.3□□□□□ -2.2
PABPC1-206ENST00000518293 SPRR2DP22532 72 aa1.3□□□□□ -2.2
PABPC1-206ENST00000518293 CLLU1Q5K131 121 aa1.3□□□□□ -2.2
PABPC1-206ENST00000518293 MUSTN1Q8IVN3 82 aa1.3□□□□□ -2.2
PABPC1-206ENST00000518293 PMCHL2Q9BQD1 86 aa1.3□□□□□ -2.2
PABPC1-206ENST00000518293 PRO2289Q9P1D8 64 aa1.3□□□□□ -2.2
PABPC1-206ENST00000518293 IGKV3D-7A0A0C4DH55 119 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 TRACP01848 142 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 FABP2P12104 132 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 HIST1H2BOP23527 126 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 HIST1H2BBP33778 126 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 HIST1H2BDP58876 126 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 KRTAP12-1P59990 96 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 HIST1H2BCP62807 126 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 HIST2H2BEQ16778 126 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 KRTAP19-8Q3LI54 63 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.29□□□□□ -2.2
PABPC1-206ENST00000518293 CSAG1Q6PB30 78 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 LCA10Q71F78 164 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 HIST1H2BHQ93079 126 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 HIST1H2BNQ99877 126 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 HIST1H2BMQ99879 126 aa1.29□□□□□ -2.2
PABPC1-206ENST00000518293 A0A1B0GX51 115 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 TSTD3H0UI37 97 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 H3BT86 120 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 SYS1-DBNDD2H3BUS1 97 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 LINC01554Q52M75 96 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 LINC01545Q5VT33 79 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 KTN1-AS1Q86SY8 53 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 KRTAP8-1Q8IUC2 63 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 PRR15Q8IV56 129 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 CRIPTQ9P021 101 aa1.28□□□□□ -2.2
PABPC1-206ENST00000518293 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
PABPC1-206ENST00000518293 DNAL4O96015 105 aa1.27□□□□□ -2.21
PABPC1-206ENST00000518293 MT1BP07438 61 aa1.27□□□□□ -2.21
PABPC1-206ENST00000518293 SVBPQ8N300 66 aa1.27□□□□□ -2.21
PABPC1-206ENST00000518293 LINC00472Q9H8W2 130 aa1.27□□□□□ -2.21
PABPC1-206ENST00000518293 K7EQZ3 153 aa1.26□□□□□ -2.21
PABPC1-206ENST00000518293 TAX1BP3O14907 124 aa1.26□□□□□ -2.21
PABPC1-206ENST00000518293 APOC3P02656 99 aa1.26□□□□□ -2.21
PABPC1-206ENST00000518293 CCKP06307 115 aa1.26□□□□□ -2.21
PABPC1-206ENST00000518293 SCGB1A1P11684 91 aa1.26□□□□□ -2.21
PABPC1-206ENST00000518293 KLKP1Q107X0 134 aa1.26□□□□□ -2.21
PABPC1-206ENST00000518293 C7orf65Q6ZTY9 151 aa1.26□□□□□ -2.21
PABPC1-206ENST00000518293 A0A1B0GW54 56 aa1.25□□□□□ -2.21
PABPC1-206ENST00000518293 H3BPC8 53 aa1.25□□□□□ -2.21
PABPC1-206ENST00000518293 TMEM256-PLSCR3K7ERE1 68 aa1.25□□□□□ -2.21
PABPC1-206ENST00000518293 VPS25Q9BRG1 176 aa1.25□□□□□ -2.21
PABPC1-206ENST00000518293 PLAC4Q8WY50 150 aa1.24□□□□□ -2.21
PABPC1-206ENST00000518293 ORMDL1Q9P0S3 153 aa1.24□□□□□ -2.21
PABPC1-206ENST00000518293 S4R3F8 94 aa1.24□□□□□ -2.21
PABPC1-206ENST00000518293 TRAV7A0A075B6U4 112 aa1.23□□□□□ -2.21
PABPC1-206ENST00000518293 K7ERJ3 54 aa1.23□□□□□ -2.21
PABPC1-206ENST00000518293 COX6CP09669 75 aa1.23□□□□□ -2.21
PABPC1-206ENST00000518293 PDE6GP18545 87 aa1.23□□□□□ -2.21
PABPC1-206ENST00000518293 KRTDAPP60985 99 aa1.23□□□□□ -2.21
PABPC1-206ENST00000518293 RBM3P98179 157 aaKnown RBP1.23□□□□□ -2.21
PABPC1-206ENST00000518293 MRPL34Q9BQ48 92 aaKnown RBP1.23□□□□□ -2.21
PABPC1-206ENST00000518293 C9JAW5 83 aa1.22□□□□□ -2.21
PABPC1-206ENST00000518293 HIST3H2BBQ8N257 126 aa1.22□□□□□ -2.21
PABPC1-206ENST00000518293 TMEM254Q8TBM7 123 aa1.22□□□□□ -2.21
PABPC1-206ENST00000518293 hDV103S1A0JD37 113 aa1.21□□□□□ -2.22
PABPC1-206ENST00000518293 HIST1H4AP62805 103 aaKnown RBP1.21□□□□□ -2.22
PABPC1-206ENST00000518293 RPS28P62857 69 aaKnown RBP1.21□□□□□ -2.22
PABPC1-206ENST00000518293 Q6ZQT0 140 aa1.21□□□□□ -2.22
PABPC1-206ENST00000518293 NREPQ16612 68 aa1.2□□□□□ -2.22
PABPC1-206ENST00000518293 ATOH7Q8N100 152 aa1.2□□□□□ -2.22
PABPC1-206ENST00000518293 HIST1H2BLQ99880 126 aa1.2□□□□□ -2.22
PABPC1-206ENST00000518293 NAA38Q9BRA0 125 aaKnown RBP1.2□□□□□ -2.22
PABPC1-206ENST00000518293 PRO1854Q9UHT4 67 aa1.2□□□□□ -2.22
PABPC1-206ENST00000518293 JMJD7-PLA2G4BH0Y9G9 81 aa1.19□□□□□ -2.22
PABPC1-206ENST00000518293 HIST1H2BKO60814 126 aa1.18□□□□□ -2.22
PABPC1-206ENST00000518293 HIST1H2BJP06899 126 aa1.18□□□□□ -2.22
PABPC1-206ENST00000518293 C20orf197Q8N268 126 aa1.18□□□□□ -2.22
PABPC1-206ENST00000518293 MMP24-AS1A0A0U1RRL7 71 aa1.17□□□□□ -2.22
PABPC1-206ENST00000518293 HCG22E2RYF7 251 aa1.17□□□□□ -2.22
PABPC1-206ENST00000518293 H0YAA0 97 aa1.17□□□□□ -2.22
PABPC1-206ENST00000518293 DLEU1O43261 78 aa1.17□□□□□ -2.22
PABPC1-206ENST00000518293 NDUFC1O43677 76 aa1.17□□□□□ -2.22
PABPC1-206ENST00000518293 FXYD2P54710 66 aa1.17□□□□□ -2.22
PABPC1-206ENST00000518293 HIGD1BQ9P298 99 aa1.17□□□□□ -2.22
PABPC1-206ENST00000518293 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
PABPC1-206ENST00000518293 A0A1B0GV90 55 aa1.16□□□□□ -2.22
PABPC1-206ENST00000518293 BAALC-AS2P0C853 105 aa1.16□□□□□ -2.22
PABPC1-206ENST00000518293 COX8AP10176 69 aa1.16□□□□□ -2.22
PABPC1-206ENST00000518293 ROMO1P60602 79 aa1.16□□□□□ -2.22
PABPC1-206ENST00000518293 MT1XP80297 61 aa1.16□□□□□ -2.22
PABPC1-206ENST00000518293 CASC2Q6XLA1 102 aa1.16□□□□□ -2.22
PABPC1-206ENST00000518293 BRK1Q8WUW1 75 aa1.16□□□□□ -2.22
PABPC1-206ENST00000518293 LOC110117498A0A087WWA1 95 aa1.15□□□□□ -2.23
PABPC1-206ENST00000518293 VAMP8Q9BV40 100 aa1.15□□□□□ -2.23
PABPC1-206ENST00000518293 TP53AIP1Q9HCN2 124 aa1.14□□□□□ -2.23
PABPC1-206ENST00000518293 ACYP1P07311 99 aa1.13□□□□□ -2.23
PABPC1-206ENST00000518293 S100A1P23297 94 aa1.13□□□□□ -2.23
PABPC1-206ENST00000518293 MT4P47944 62 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms