RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 MAP1AP78559 2803 aaPredicted RBP0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 ACACBO00763 2458 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 CSMD1Q96PZ7 3565 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 KMT2DO14686 5537 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 NBEAL2Q6ZNJ1 2754 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 MYO15AQ9UKN7 3530 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 HERC2O95714 4834 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 VPS13DQ5THJ4 4388 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 BIRC6Q9NR09 4857 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 CFAP46Q8IYW2 2715 aa0.14□□□□□ -2.39
SCARNA11.3-201ENST00000517276 NBPF19A0A087WUL8 3843 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 MDN1Q9NU22 5596 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DNAH6Q9C0G6 4158 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 TLN2Q9Y4G6 2542 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 SPRR2AP35326 72 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 FAM186AA6NE01 2351 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 TEX15Q9BXT5 2789 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 KALRNO60229 2985 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 VPS13CQ709C8 3753 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 RNF213Q63HN8 5207 aa0.13□□□□□ -2.39
SCARNA11.3-201ENST00000517276 SPTAN1Q13813 2472 aaKnown RBP0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 ITPR2Q14571 2701 aa0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 SMG1Q96Q15 3661 aaKnown RBP0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 MGAM2Q2M2H8 2515 aa0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 CEP250Q9BV73 2442 aa0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 KRTAP20-1Q3LI63 56 aa0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 SPTBN5Q9NRC6 3674 aaKnown RBP0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 VCANP13611 3396 aa0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 TRPM2O94759 1503 aa0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 SZT2Q5T011 3432 aa0.12□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DNAH1Q9P2D7 4330 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 USH2AO75445 5202 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 STAB2Q8WWQ8 2551 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 USP34Q70CQ2 3546 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 WDFY3Q8IZQ1 3526 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DNAH8Q96JB1 4490 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 LAMA5O15230 3695 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 TNP1P09430 55 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 ZANQ9Y493 2812 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 BRCA2P51587 3418 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 HIVEP1P15822 2718 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 FAT1Q14517 4588 aa0.11□□□□□ -2.39
SCARNA11.3-201ENST00000517276 A0A0C4DFX4 3053 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 PCNTO95613 3336 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 ASPMQ8IZT6 3477 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 STARD9Q9P2P6 4700 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 CLTCL1P53675 1640 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DNAH14Q0VDD8 3507 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 TGP01266 2768 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 ATP7AQ04656 1500 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 A8MTW9 85 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 POLR2KP53803 58 aaKnown RBP0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 MXRA5Q9NR99 2828 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DYNC1H1Q14204 4646 aaKnown RBP0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 SRCAPQ6ZRS2 3230 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 PLECQ15149 4684 aaKnown RBP0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DNAH7Q8WXX0 4024 aa0.1□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DMDP11532 3685 aa0.09□□□□□ -2.39
SCARNA11.3-201ENST00000517276 WDFY4Q6ZS81 3184 aa0.09□□□□□ -2.39
SCARNA11.3-201ENST00000517276 ITPR1Q14643 2758 aa0.09□□□□□ -2.39
SCARNA11.3-201ENST00000517276 DNAH5Q8TE73 4624 aa0.09□□□□□ -2.39
SCARNA11.3-201ENST00000517276 MT1AP04731 61 aa0.09□□□□□ -2.4
SCARNA11.3-201ENST00000517276 SPRR2EP22531 72 aa0.09□□□□□ -2.4
SCARNA11.3-201ENST00000517276 UTRNP46939 3433 aa0.09□□□□□ -2.4
SCARNA11.3-201ENST00000517276 CENPEQ02224 2701 aa0.09□□□□□ -2.4
SCARNA11.3-201ENST00000517276 CSMD2Q7Z408 3487 aa0.09□□□□□ -2.4
SCARNA11.3-201ENST00000517276 SPENQ96T58 3664 aaKnown RBP0.09□□□□□ -2.4
SCARNA11.3-201ENST00000517276 MKI67P46013 3256 aaKnown RBP0.09□□□□□ -2.4
SCARNA11.3-201ENST00000517276 MUC3AQ02505 3323 aa0.08□□□□□ -2.4
SCARNA11.3-201ENST00000517276 NBEAQ8NFP9 2946 aa0.08□□□□□ -2.4
SCARNA11.3-201ENST00000517276 CELSR3Q9NYQ7 3312 aa0.08□□□□□ -2.4
SCARNA11.3-201ENST00000517276 M0QZ58 72 aa0.08□□□□□ -2.4
SCARNA11.3-201ENST00000517276 HTTP42858 3142 aa0.08□□□□□ -2.4
SCARNA11.3-201ENST00000517276 DNAH10Q8IVF4 4471 aa0.08□□□□□ -2.4
SCARNA11.3-201ENST00000517276 WDR87Q6ZQQ6 2873 aa0.08□□□□□ -2.4
SCARNA11.3-201ENST00000517276 MUC17Q685J3 4493 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 SPEGQ15772 3267 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 CEP350Q5VT06 3117 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 TRRAPQ9Y4A5 3859 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 CMYA5Q8N3K9 4069 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 CDH23Q9H251 3354 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 RANBP2P49792 3224 aaKnown RBP0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 COL12A1Q99715 3063 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 LAMA3Q16787 3333 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 NIPBLQ6KC79 2804 aaeCLIP0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 LAMA1P25391 3075 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 UNC80Q8N2C7 3258 aa0.07□□□□□ -2.4
SCARNA11.3-201ENST00000517276 SAMD9LQ8IVG5 1584 aa0.06□□□□□ -2.4
SCARNA11.3-201ENST00000517276 LRBAP50851 2863 aa0.06□□□□□ -2.4
SCARNA11.3-201ENST00000517276 XIRP2A4UGR9 3374 aa0.06□□□□□ -2.4
SCARNA11.3-201ENST00000517276 MT4P47944 62 aa0.06□□□□□ -2.4
SCARNA11.3-201ENST00000517276 DNAH17Q9UFH2 4485 aa0.06□□□□□ -2.4
SCARNA11.3-201ENST00000517276 DCHS1Q96JQ0 3298 aa0.06□□□□□ -2.4
SCARNA11.3-201ENST00000517276 SMR3BP02814 79 aaPredicted RBP0.05□□□□□ -2.4
SCARNA11.3-201ENST00000517276 KRTAP19-6Q3LI70 58 aa0.05□□□□□ -2.4
SCARNA11.3-201ENST00000517276 CLPSL2Q6UWE3 100 aa0.05□□□□□ -2.4
SCARNA11.3-201ENST00000517276 SPRR2FQ96RM1 72 aa0.05□□□□□ -2.4
SCARNA11.3-201ENST00000517276 CFAP54Q96N23 3096 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms