RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 FAM240AA0A1B0GVK7 77 aa6.11□□□□□ -1.43
TCOF1-215ENST00000515516 ATOX1O00244 68 aa6.11□□□□□ -1.43
TCOF1-215ENST00000515516 MT1BP07438 61 aa6.11□□□□□ -1.43
TCOF1-215ENST00000515516 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
TCOF1-215ENST00000515516 H0Y9P7 68 aa6.09□□□□□ -1.43
TCOF1-215ENST00000515516 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
TCOF1-215ENST00000515516 IMUPQ9GZP8 106 aa6.08□□□□□ -1.44
TCOF1-215ENST00000515516 A0A087WVE0 104 aa6.07□□□□□ -1.44
TCOF1-215ENST00000515516 NDUFC1O43677 76 aa6.07□□□□□ -1.44
TCOF1-215ENST00000515516 LINC00643Q86TS7 51 aa6.03□□□□□ -1.44
TCOF1-215ENST00000515516 A8MUN3 132 aa6.02□□□□□ -1.45
TCOF1-215ENST00000515516 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
TCOF1-215ENST00000515516 H0YAA0 97 aa5.99□□□□□ -1.45
TCOF1-215ENST00000515516 LINC00208Q96KT6 92 aa5.99□□□□□ -1.45
TCOF1-215ENST00000515516 MP68P56378 58 aa5.98□□□□□ -1.45
TCOF1-215ENST00000515516 ADM2Q7Z4H4 148 aa5.95□□□□□ -1.46
TCOF1-215ENST00000515516 NEBP20929 6669 aa5.92□□□□□ -1.46
TCOF1-215ENST00000515516 OCR1Q9BZK8 76 aa5.9□□□□□ -1.46
TCOF1-215ENST00000515516 H3BPC8 53 aa5.86□□□□□ -1.47
TCOF1-215ENST00000515516 A0A1B0GV90 55 aa5.85□□□□□ -1.47
TCOF1-215ENST00000515516 J3QR89 54 aa5.85□□□□□ -1.47
TCOF1-215ENST00000515516 SCGB1A1P11684 91 aa5.85□□□□□ -1.47
TCOF1-215ENST00000515516 C20orf197Q8N268 126 aa5.84□□□□□ -1.47
TCOF1-215ENST00000515516 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
TCOF1-215ENST00000515516 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
TCOF1-215ENST00000515516 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
TCOF1-215ENST00000515516 R4GN34 69 aa5.82□□□□□ -1.48
TCOF1-215ENST00000515516 KRTAP5-9P26371 169 aa5.81□□□□□ -1.48
TCOF1-215ENST00000515516 DMAC1Q96GE9 116 aa5.78□□□□□ -1.48
TCOF1-215ENST00000515516 M0QZ58 72 aa5.75□□□□□ -1.49
TCOF1-215ENST00000515516 P0C880 135 aa5.75□□□□□ -1.49
TCOF1-215ENST00000515516 KRTAP20-1Q3LI63 56 aa5.75□□□□□ -1.49
TCOF1-215ENST00000515516 MT1XP80297 61 aa5.72□□□□□ -1.49
TCOF1-215ENST00000515516 KMT2DO14686 5537 aa5.71□□□□□ -1.5
TCOF1-215ENST00000515516 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
TCOF1-215ENST00000515516 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
TCOF1-215ENST00000515516 TRAV7A0A075B6U4 112 aa5.69□□□□□ -1.5
TCOF1-215ENST00000515516 ACYP2P14621 99 aa5.69□□□□□ -1.5
TCOF1-215ENST00000515516 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
TCOF1-215ENST00000515516 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
TCOF1-215ENST00000515516 SMIM20Q8N5G0 67 aa5.65□□□□□ -1.5
TCOF1-215ENST00000515516 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
TCOF1-215ENST00000515516 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
TCOF1-215ENST00000515516 CHKB-CPT1BH3BT56 60 aa5.61□□□□□ -1.51
TCOF1-215ENST00000515516 SPRR2EP22531 72 aa5.61□□□□□ -1.51
TCOF1-215ENST00000515516 SPRR2BP35325 72 aa5.61□□□□□ -1.51
TCOF1-215ENST00000515516 SPRR2AP35326 72 aa5.61□□□□□ -1.51
TCOF1-215ENST00000515516 MT-ATP8P03928 68 aa5.6□□□□□ -1.51
TCOF1-215ENST00000515516 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
TCOF1-215ENST00000515516 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.51
TCOF1-215ENST00000515516 K7ERU9 68 aa5.57□□□□□ -1.52
TCOF1-215ENST00000515516 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
TCOF1-215ENST00000515516 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
TCOF1-215ENST00000515516 SNURFQ9Y675 71 aa5.51□□□□□ -1.53
TCOF1-215ENST00000515516 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
TCOF1-215ENST00000515516 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
TCOF1-215ENST00000515516 LCE1AQ5T7P2 110 aa5.48□□□□□ -1.53
TCOF1-215ENST00000515516 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
TCOF1-215ENST00000515516 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
TCOF1-215ENST00000515516 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
TCOF1-215ENST00000515516 SPRR2DP22532 72 aa5.43□□□□□ -1.54
TCOF1-215ENST00000515516 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.54
TCOF1-215ENST00000515516 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
TCOF1-215ENST00000515516 SERP2Q8N6R1 65 aa5.39□□□□□ -1.55
TCOF1-215ENST00000515516 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
TCOF1-215ENST00000515516 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
TCOF1-215ENST00000515516 SEC61GP60059 68 aa5.33□□□□□ -1.56
TCOF1-215ENST00000515516 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
TCOF1-215ENST00000515516 COA5Q86WW8 74 aa5.3□□□□□ -1.56
TCOF1-215ENST00000515516 SERP1Q9Y6X1 66 aa5.3□□□□□ -1.56
TCOF1-215ENST00000515516 H3BS24 57 aa5.28□□□□□ -1.56
TCOF1-215ENST00000515516 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
TCOF1-215ENST00000515516 A0A0D9SG42 100 aa5.23□□□□□ -1.57
TCOF1-215ENST00000515516 COX7CP15954 63 aa5.2□□□□□ -1.58
TCOF1-215ENST00000515516 A0A1B0GU33 70 aa5.19□□□□□ -1.58
TCOF1-215ENST00000515516 SPINT4Q6UDR6 99 aa5.18□□□□□ -1.58
TCOF1-215ENST00000515516 SPATA8Q6RVD6 105 aa5.17□□□□□ -1.58
TCOF1-215ENST00000515516 H7BZZ5 65 aa5.11□□□□□ -1.59
TCOF1-215ENST00000515516 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
TCOF1-215ENST00000515516 MT1EP04732 61 aa5.09□□□□□ -1.59
TCOF1-215ENST00000515516 SMIM26A0A096LP01 95 aa5.07□□□□□ -1.6
TCOF1-215ENST00000515516 A0A1B0GU69 56 aa5.07□□□□□ -1.6
TCOF1-215ENST00000515516 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
TCOF1-215ENST00000515516 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
TCOF1-215ENST00000515516 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
TCOF1-215ENST00000515516 CYSTM1Q9H1C7 97 aa5.06□□□□□ -1.6
TCOF1-215ENST00000515516 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
TCOF1-215ENST00000515516 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
TCOF1-215ENST00000515516 ANAPC13Q9BS18 74 aa4.99□□□□□ -1.61
TCOF1-215ENST00000515516 A8MU10 97 aa4.96□□□□□ -1.62
TCOF1-215ENST00000515516 MT1GP13640 62 aa4.96□□□□□ -1.62
TCOF1-215ENST00000515516 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
TCOF1-215ENST00000515516 PRR15LQ9BU68 103 aa4.93□□□□□ -1.62
TCOF1-215ENST00000515516 TNP1P09430 55 aa4.92□□□□□ -1.62
TCOF1-215ENST00000515516 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
TCOF1-215ENST00000515516 ATP5EP56381 51 aaPredicted RBP4.88□□□□□ -1.63
TCOF1-215ENST00000515516 CCDC179H3BU77 68 aa4.86□□□□□ -1.63
TCOF1-215ENST00000515516 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
TCOF1-215ENST00000515516 MT1MQ8N339 61 aa4.85□□□□□ -1.63
TCOF1-215ENST00000515516 MT1LQ93083 61 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms