RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 PRO2289Q9P1D8 64 aa9.66□□□□□ -0.86
SMAD1-214ENST00000514831 A0A1W2PPM0 123 aa9.65□□□□□ -0.86
SMAD1-214ENST00000514831 LCE1AQ5T7P2 110 aa9.63□□□□□ -0.87
SMAD1-214ENST00000514831 KRTAP8-1Q8IUC2 63 aa9.62□□□□□ -0.87
SMAD1-214ENST00000514831 MT1XP80297 61 aa9.61□□□□□ -0.87
SMAD1-214ENST00000514831 H0YAA0 97 aa9.6□□□□□ -0.87
SMAD1-214ENST00000514831 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
SMAD1-214ENST00000514831 TAX1BP3O14907 124 aa9.57□□□□□ -0.88
SMAD1-214ENST00000514831 A8MUN3 132 aa9.53□□□□□ -0.88
SMAD1-214ENST00000514831 SMIM6P0DI80 62 aa9.51□□□□□ -0.89
SMAD1-214ENST00000514831 KRTAP12-2P59991 146 aa9.51□□□□□ -0.89
SMAD1-214ENST00000514831 SPRR2DP22532 72 aa9.5□□□□□ -0.89
SMAD1-214ENST00000514831 NDUFC1O43677 76 aa9.49□□□□□ -0.89
SMAD1-214ENST00000514831 SPCS1Q9Y6A9 102 aa9.46□□□□□ -0.9
SMAD1-214ENST00000514831 LOC101927531A0A1B0GV80 90 aa9.45□□□□□ -0.9
SMAD1-214ENST00000514831 TRAV22A0A0B4J277 110 aa9.44□□□□□ -0.9
SMAD1-214ENST00000514831 ADM2Q7Z4H4 148 aa9.44□□□□□ -0.9
SMAD1-214ENST00000514831 PLAC4Q8WY50 150 aa9.44□□□□□ -0.9
SMAD1-214ENST00000514831 K7EP34 96 aa9.41□□□□□ -0.9
SMAD1-214ENST00000514831 PRO0461Q9UI25 63 aa9.37□□□□□ -0.91
SMAD1-214ENST00000514831 KRTAP4-8A0A0G2JLE6 195 aa9.35□□□□□ -0.91
SMAD1-214ENST00000514831 KRTAP4-8Q9BYQ9 185 aa9.35□□□□□ -0.91
SMAD1-214ENST00000514831 LCE3BQ5TA77 95 aa9.29□□□□□ -0.92
SMAD1-214ENST00000514831 ACYP1P07311 99 aa9.27□□□□□ -0.93
SMAD1-214ENST00000514831 KRTAP3-2Q9BYR7 98 aa9.27□□□□□ -0.93
SMAD1-214ENST00000514831 R4GN34 69 aa9.26□□□□□ -0.93
SMAD1-214ENST00000514831 ATOX1O00244 68 aa9.2□□□□□ -0.94
SMAD1-214ENST00000514831 H0Y9P7 68 aa9.19□□□□□ -0.94
SMAD1-214ENST00000514831 UQCRQO14949 82 aa9.17□□□□□ -0.94
SMAD1-214ENST00000514831 P0C880 135 aa9.16□□□□□ -0.94
SMAD1-214ENST00000514831 M0QZ58 72 aa9.15□□□□□ -0.94
SMAD1-214ENST00000514831 KRTAP10-7P60409 375 aaPredicted RBP9.15□□□□□ -0.94
SMAD1-214ENST00000514831 C20orf197Q8N268 126 aa9.15□□□□□ -0.94
SMAD1-214ENST00000514831 KRTAP10-12P60413 245 aa9.12□□□□□ -0.95
SMAD1-214ENST00000514831 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
SMAD1-214ENST00000514831 ETDBQ3ZM63 59 aa9.04□□□□□ -0.96
SMAD1-214ENST00000514831 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
SMAD1-214ENST00000514831 F8W1H4 67 aa9□□□□□ -0.97
SMAD1-214ENST00000514831 ATP5EP2Q5VTU8 51 aa8.99□□□□□ -0.97
SMAD1-214ENST00000514831 HIST1H4AP62805 103 aaKnown RBP8.98□□□□□ -0.97
SMAD1-214ENST00000514831 LINC00208Q96KT6 92 aa8.98□□□□□ -0.97
SMAD1-214ENST00000514831 GTF2H5Q6ZYL4 71 aa8.97□□□□□ -0.97
SMAD1-214ENST00000514831 GPR98Q8WXG9 6306 aa8.96□□□□□ -0.97
SMAD1-214ENST00000514831 LOC105371267A0A1B0GV96 52 aa8.89□□□□□ -0.99
SMAD1-214ENST00000514831 DSTQ03001 7570 aaKnown RBP8.88□□□□□ -0.99
SMAD1-214ENST00000514831 FAM240AA0A1B0GVK7 77 aa8.84□□□□□ -0.99
SMAD1-214ENST00000514831 MP68P56378 58 aa8.84□□□□□ -0.99
SMAD1-214ENST00000514831 DMAC1Q96GE9 116 aa8.82□□□□□ -1
SMAD1-214ENST00000514831 OCR1Q9BZK8 76 aa8.79□□□□□ -1
SMAD1-214ENST00000514831 KRTAP4-9Q9BYQ8 210 aa8.76□□□□□ -1.01
SMAD1-214ENST00000514831 MT-ATP8P03928 68 aa8.74□□□□□ -1.01
SMAD1-214ENST00000514831 LCE5AQ5TCM9 118 aa8.71□□□□□ -1.02
SMAD1-214ENST00000514831 H3BPC8 53 aa8.66□□□□□ -1.02
SMAD1-214ENST00000514831 LINC00643Q86TS7 51 aa8.65□□□□□ -1.02
SMAD1-214ENST00000514831 TRAV7A0A075B6U4 112 aa8.61□□□□□ -1.03
SMAD1-214ENST00000514831 KRTAP19-7Q3SYF9 63 aa8.6□□□□□ -1.03
SMAD1-214ENST00000514831 KRTAP19-3Q7Z4W3 81 aa8.6□□□□□ -1.03
SMAD1-214ENST00000514831 MT1EP04732 61 aa8.56□□□□□ -1.04
SMAD1-214ENST00000514831 LCE1DQ5T752 114 aa8.53□□□□□ -1.04
SMAD1-214ENST00000514831 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
SMAD1-214ENST00000514831 ACYP2P14621 99 aa8.46□□□□□ -1.06
SMAD1-214ENST00000514831 CYSTM1Q9H1C7 97 aa8.44□□□□□ -1.06
SMAD1-214ENST00000514831 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
SMAD1-214ENST00000514831 LCE4AQ5TA78 99 aa8.38□□□□□ -1.07
SMAD1-214ENST00000514831 PCP4L1A6NKN8 68 aa8.35□□□□□ -1.07
SMAD1-214ENST00000514831 MT4P47944 62 aa8.34□□□□□ -1.07
SMAD1-214ENST00000514831 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.07
SMAD1-214ENST00000514831 SCGB1A1P11684 91 aa8.33□□□□□ -1.08
SMAD1-214ENST00000514831 MT1GP13640 62 aa8.32□□□□□ -1.08
SMAD1-214ENST00000514831 HMCN1Q96RW7 5635 aa8.3□□□□□ -1.08
SMAD1-214ENST00000514831 CHKB-CPT1BH3BT56 60 aa8.29□□□□□ -1.08
SMAD1-214ENST00000514831 PP632Q6XCG6 107 aa8.27□□□□□ -1.09
SMAD1-214ENST00000514831 KRTAP19-5Q3LI72 72 aa8.22□□□□□ -1.09
SMAD1-214ENST00000514831 KRTAP5-10Q6L8G5 202 aa8.21□□□□□ -1.1
SMAD1-214ENST00000514831 A0A0D9SG42 100 aa8.19□□□□□ -1.1
SMAD1-214ENST00000514831 AHNAK2Q8IVF2 5795 aa8.18□□□□□ -1.1
SMAD1-214ENST00000514831 MT1MQ8N339 61 aa8.18□□□□□ -1.1
SMAD1-214ENST00000514831 KRTAP5-4Q6L8H1 288 aa8.14□□□□□ -1.11
SMAD1-214ENST00000514831 MT1LQ93083 61 aa8.08□□□□□ -1.12
SMAD1-214ENST00000514831 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
SMAD1-214ENST00000514831 J3QR89 54 aa8□□□□□ -1.13
SMAD1-214ENST00000514831 SMIM20Q8N5G0 67 aa7.99□□□□□ -1.13
SMAD1-214ENST00000514831 KRTAP4-3Q9BYR4 195 aa7.99□□□□□ -1.13
SMAD1-214ENST00000514831 KRTAP5-7Q6L8G8 165 aa7.97□□□□□ -1.13
SMAD1-214ENST00000514831 SPANXA2-OT1Q8N9U9 137 aa7.93□□□□□ -1.14
SMAD1-214ENST00000514831 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
SMAD1-214ENST00000514831 SNURFQ9Y675 71 aa7.91□□□□□ -1.14
SMAD1-214ENST00000514831 KRTAP5-3Q6L8H2 238 aa7.89□□□□□ -1.15
SMAD1-214ENST00000514831 A0A1B0GV90 55 aa7.86□□□□□ -1.15
SMAD1-214ENST00000514831 SPATA8Q6RVD6 105 aa7.86□□□□□ -1.15
SMAD1-214ENST00000514831 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
SMAD1-214ENST00000514831 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
SMAD1-214ENST00000514831 SEC61GP60059 68 aa7.8□□□□□ -1.16
SMAD1-214ENST00000514831 SERP1Q9Y6X1 66 aa7.79□□□□□ -1.16
SMAD1-214ENST00000514831 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
SMAD1-214ENST00000514831 COA5Q86WW8 74 aa7.73□□□□□ -1.17
SMAD1-214ENST00000514831 A0A1B0GU33 70 aa7.72□□□□□ -1.17
SMAD1-214ENST00000514831 KRTAP20-2Q3LI61 65 aa7.71□□□□□ -1.18
SMAD1-214ENST00000514831 KRTAP4-7Q9BYR0 210 aa7.63□□□□□ -1.19
SMAD1-214ENST00000514831 TNP1P09430 55 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms