RNA–Protein interactions for RNA: ENST00000514499.1

ARFIP1-211, Transcript of ADP ribosylation factor interacting protein 1, humanhuman

TSL 4

Gene ARFIP1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1-211ENST00000514499 KRTAP21-3Q3LHN1 58 aa1.76□□□□□ -2.13
ARFIP1-211ENST00000514499 EPPK1P58107 5090 aaKnown RBP1.76□□□□□ -2.13
ARFIP1-211ENST00000514499 M0R2T5 61 aa1.75□□□□□ -2.13
ARFIP1-211ENST00000514499 NBASA2RRP1 2371 aa1.74□□□□□ -2.13
ARFIP1-211ENST00000514499 LOC400499M0QZD8 3231 aa1.74□□□□□ -2.13
ARFIP1-211ENST00000514499 NBPF19A0A087WUL8 3843 aa1.74□□□□□ -2.13
ARFIP1-211ENST00000514499 DMXL1Q9Y485 3027 aa1.74□□□□□ -2.13
ARFIP1-211ENST00000514499 TENM1Q9UKZ4 2725 aa1.74□□□□□ -2.13
ARFIP1-211ENST00000514499 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
ARFIP1-211ENST00000514499 CREBBPQ92793 2442 aa1.72□□□□□ -2.13
ARFIP1-211ENST00000514499 HTN3P15516 51 aa1.72□□□□□ -2.13
ARFIP1-211ENST00000514499 RPS29P62273 56 aaKnown RBP1.72□□□□□ -2.13
ARFIP1-211ENST00000514499 MYO15AQ9UKN7 3530 aa1.71□□□□□ -2.13
ARFIP1-211ENST00000514499 NBEAQ8NFP9 2946 aa1.71□□□□□ -2.14
ARFIP1-211ENST00000514499 RYR2Q92736 4967 aa1.71□□□□□ -2.14
ARFIP1-211ENST00000514499 AKAP13Q12802 2813 aa1.71□□□□□ -2.14
ARFIP1-211ENST00000514499 UTP20O75691 2785 aaKnown RBP1.7□□□□□ -2.14
ARFIP1-211ENST00000514499 CEP295Q9C0D2 2601 aa1.7□□□□□ -2.14
ARFIP1-211ENST00000514499 CRYBG3Q68DQ2 2970 aa1.7□□□□□ -2.14
ARFIP1-211ENST00000514499 ZANQ9Y493 2812 aa1.69□□□□□ -2.14
ARFIP1-211ENST00000514499 FAM186AA6NE01 2351 aa1.69□□□□□ -2.14
ARFIP1-211ENST00000514499 WDFY3Q8IZQ1 3526 aa1.68□□□□□ -2.14
ARFIP1-211ENST00000514499 MTORP42345 2549 aa1.68□□□□□ -2.14
ARFIP1-211ENST00000514499 RIF1Q5UIP0 2472 aaKnown RBP1.68□□□□□ -2.14
ARFIP1-211ENST00000514499 DMDP11532 3685 aa1.68□□□□□ -2.14
ARFIP1-211ENST00000514499 DMBT1Q9UGM3 2413 aaPredicted RBP1.68□□□□□ -2.14
ARFIP1-211ENST00000514499 HERC2O95714 4834 aa1.67□□□□□ -2.14
ARFIP1-211ENST00000514499 ITPR1Q14643 2758 aa1.67□□□□□ -2.14
ARFIP1-211ENST00000514499 FREM2Q5SZK8 3169 aa1.67□□□□□ -2.14
ARFIP1-211ENST00000514499 KRTAP12-3P60328 96 aa1.67□□□□□ -2.14
ARFIP1-211ENST00000514499 FRYLO94915 3013 aa1.67□□□□□ -2.14
ARFIP1-211ENST00000514499 USP9YO00507 2555 aaPredicted RBP1.66□□□□□ -2.14
ARFIP1-211ENST00000514499 BSNQ9UPA5 3926 aa1.66□□□□□ -2.14
ARFIP1-211ENST00000514499 COL12A1Q99715 3063 aa1.66□□□□□ -2.14
ARFIP1-211ENST00000514499 DNAH11Q96DT5 4516 aa1.65□□□□□ -2.15
ARFIP1-211ENST00000514499 AKAP9Q99996 3911 aa1.64□□□□□ -2.15
ARFIP1-211ENST00000514499 HIVEP3Q5T1R4 2406 aa1.64□□□□□ -2.15
ARFIP1-211ENST00000514499 TGP01266 2768 aa1.63□□□□□ -2.15
ARFIP1-211ENST00000514499 TLN2Q9Y4G6 2542 aa1.63□□□□□ -2.15
ARFIP1-211ENST00000514499 SPENQ96T58 3664 aaKnown RBP1.62□□□□□ -2.15
ARFIP1-211ENST00000514499 KRTAP10-4P60372 401 aaPredicted RBP1.62□□□□□ -2.15
ARFIP1-211ENST00000514499 ABCA13Q86UQ4 5058 aa1.61□□□□□ -2.15
ARFIP1-211ENST00000514499 CHD9Q3L8U1 2897 aa1.61□□□□□ -2.15
ARFIP1-211ENST00000514499 MAP1AP78559 2803 aaPredicted RBP1.6□□□□□ -2.15
ARFIP1-211ENST00000514499 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
ARFIP1-211ENST00000514499 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
ARFIP1-211ENST00000514499 KRTAP2-1Q9BYU5 128 aa1.6□□□□□ -2.15
ARFIP1-211ENST00000514499 HERC1Q15751 4861 aa1.59□□□□□ -2.16
ARFIP1-211ENST00000514499 NIPBLQ6KC79 2804 aaeCLIP1.58□□□□□ -2.16
ARFIP1-211ENST00000514499 SACSQ9NZJ4 4579 aa1.58□□□□□ -2.16
ARFIP1-211ENST00000514499 U3KQA8 63 aa1.58□□□□□ -2.16
ARFIP1-211ENST00000514499 MYCBP2O75592 4640 aa1.58□□□□□ -2.16
ARFIP1-211ENST00000514499 DEFB4AO15263 64 aa1.57□□□□□ -2.16
ARFIP1-211ENST00000514499 CUBNO60494 3623 aa1.57□□□□□ -2.16
ARFIP1-211ENST00000514499 TRIOO75962 3097 aa1.56□□□□□ -2.16
ARFIP1-211ENST00000514499 ITPR2Q14571 2701 aa1.56□□□□□ -2.16
ARFIP1-211ENST00000514499 LRBAP50851 2863 aa1.56□□□□□ -2.16
ARFIP1-211ENST00000514499 COL7A1Q02388 2944 aa1.55□□□□□ -2.16
ARFIP1-211ENST00000514499 NSD1Q96L73 2696 aaPredicted RBP1.55□□□□□ -2.16
ARFIP1-211ENST00000514499 DCHS2Q6V1P9 2916 aa1.54□□□□□ -2.16
ARFIP1-211ENST00000514499 MACF1Q9UPN3 7388 aaKnown RBP1.54□□□□□ -2.16
ARFIP1-211ENST00000514499 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
ARFIP1-211ENST00000514499 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
ARFIP1-211ENST00000514499 SMR3AQ99954 134 aa1.54□□□□□ -2.16
ARFIP1-211ENST00000514499 MXRA5Q9NR99 2828 aa1.54□□□□□ -2.16
ARFIP1-211ENST00000514499 MGAM2Q2M2H8 2515 aa1.54□□□□□ -2.16
ARFIP1-211ENST00000514499 LAMA5O15230 3695 aa1.53□□□□□ -2.16
ARFIP1-211ENST00000514499 SONP18583 2426 aaKnown RBP1.52□□□□□ -2.17
ARFIP1-211ENST00000514499 ADGRG4Q8IZF6 3080 aa1.52□□□□□ -2.17
ARFIP1-211ENST00000514499 LYSTQ99698 3801 aa1.52□□□□□ -2.17
ARFIP1-211ENST00000514499 CSMD2Q7Z408 3487 aa1.51□□□□□ -2.17
ARFIP1-211ENST00000514499 TENM3Q9P273 2699 aa1.51□□□□□ -2.17
ARFIP1-211ENST00000514499 ATMQ13315 3056 aa1.51□□□□□ -2.17
ARFIP1-211ENST00000514499 CRCT1Q9UGL9 99 aa1.5□□□□□ -2.17
ARFIP1-211ENST00000514499 DNAH8Q96JB1 4490 aa1.5□□□□□ -2.17
ARFIP1-211ENST00000514499 DMXL2Q8TDJ6 3036 aa1.5□□□□□ -2.17
ARFIP1-211ENST00000514499 VPS13BQ7Z7G8 4022 aa1.5□□□□□ -2.17
ARFIP1-211ENST00000514499 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
ARFIP1-211ENST00000514499 HIVEP1P15822 2718 aa1.49□□□□□ -2.17
ARFIP1-211ENST00000514499 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
ARFIP1-211ENST00000514499 DYNC2H1Q8NCM8 4307 aaKnown RBP1.47□□□□□ -2.17
ARFIP1-211ENST00000514499 KMT2AQ03164 3969 aa1.47□□□□□ -2.17
ARFIP1-211ENST00000514499 CSMD3Q7Z407 3707 aa1.47□□□□□ -2.17
ARFIP1-211ENST00000514499 SVEP1Q4LDE5 3571 aa1.47□□□□□ -2.17
ARFIP1-211ENST00000514499 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
ARFIP1-211ENST00000514499 DNAH3Q8TD57 4116 aa1.46□□□□□ -2.18
ARFIP1-211ENST00000514499 APCP25054 2843 aa1.46□□□□□ -2.18
ARFIP1-211ENST00000514499 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
ARFIP1-211ENST00000514499 ACANP16112 2415 aa1.45□□□□□ -2.18
ARFIP1-211ENST00000514499 ZNF469Q96JG9 3925 aaPredicted RBP1.44□□□□□ -2.18
ARFIP1-211ENST00000514499 CENPEQ02224 2701 aa1.44□□□□□ -2.18
ARFIP1-211ENST00000514499 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
ARFIP1-211ENST00000514499 VPS13CQ709C8 3753 aa1.43□□□□□ -2.18
ARFIP1-211ENST00000514499 DNAH7Q8WXX0 4024 aa1.43□□□□□ -2.18
ARFIP1-211ENST00000514499 NEBP20929 6669 aa1.43□□□□□ -2.18
ARFIP1-211ENST00000514499 PRKDCP78527 4128 aaKnown RBP1.43□□□□□ -2.18
ARFIP1-211ENST00000514499 PRM1P04553 51 aa1.42□□□□□ -2.18
ARFIP1-211ENST00000514499 FLGP20930 4061 aaPredicted RBP1.4□□□□□ -2.18
ARFIP1-211ENST00000514499 SSPOA2VEC9 5147 aa1.4□□□□□ -2.19
ARFIP1-211ENST00000514499 DNAH2Q9P225 4427 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms