RNA–Protein interactions for RNA: ENST00000513603.1

GIN1-206, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 2

Gene GIN1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-206ENST00000513603 DMXL1Q9Y485 3027 aa0.27□□□□□ -2.37
GIN1-206ENST00000513603 BOD1L1Q8NFC6 3051 aa0.27□□□□□ -2.37
GIN1-206ENST00000513603 COL12A1Q99715 3063 aa0.27□□□□□ -2.37
GIN1-206ENST00000513603 RANBP2P49792 3224 aaKnown RBP0.27□□□□□ -2.37
GIN1-206ENST00000513603 HMCN2Q8NDA2 5059 aa0.27□□□□□ -2.37
GIN1-206ENST00000513603 NBASA2RRP1 2371 aa0.27□□□□□ -2.37
GIN1-206ENST00000513603 SPTAN1Q13813 2472 aaKnown RBP0.27□□□□□ -2.37
GIN1-206ENST00000513603 PKD1L2Q7Z442 2459 aa0.27□□□□□ -2.37
GIN1-206ENST00000513603 EPG5Q9HCE0 2579 aa0.27□□□□□ -2.37
GIN1-206ENST00000513603 MAP1AP78559 2803 aaPredicted RBP0.27□□□□□ -2.37
GIN1-206ENST00000513603 ZZEF1O43149 2961 aa0.27□□□□□ -2.37
GIN1-206ENST00000513603 LAMA2P24043 3122 aaKnown RBP0.27□□□□□ -2.37
GIN1-206ENST00000513603 VPS13AQ96RL7 3174 aa0.27□□□□□ -2.37
GIN1-206ENST00000513603 LAMA3Q16787 3333 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 WDFY3Q8IZQ1 3526 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 SPTBN5Q9NRC6 3674 aaKnown RBP0.26□□□□□ -2.37
GIN1-206ENST00000513603 PCNX1Q96RV3 2341 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 NBEAL2Q6ZNJ1 2754 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 LRBAP50851 2863 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 PRRC2CQ9Y520 2896 aaKnown RBP0.26□□□□□ -2.37
GIN1-206ENST00000513603 ADGRG4Q8IZF6 3080 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 TNP1P09430 55 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 RPS29P62273 56 aaKnown RBP0.26□□□□□ -2.37
GIN1-206ENST00000513603 ACACAQ13085 2346 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 DCHS2Q6V1P9 2916 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 CDH23Q9H251 3354 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 DMDP11532 3685 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 SMG1Q96Q15 3661 aaKnown RBP0.26□□□□□ -2.37
GIN1-206ENST00000513603 SPENQ96T58 3664 aaKnown RBP0.26□□□□□ -2.37
GIN1-206ENST00000513603 CMYA5Q8N3K9 4069 aa0.26□□□□□ -2.37
GIN1-206ENST00000513603 APOBP04114 4563 aaKnown RBP0.26□□□□□ -2.37
GIN1-206ENST00000513603 DNAH17Q9UFH2 4485 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 UTRNP46939 3433 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 XIRP2A4UGR9 3374 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 LOC400499M0QZD8 3231 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 LAMA1P25391 3075 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 ITPR1Q14643 2758 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 TENM2Q9NT68 2774 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 SRRM2Q9UQ35 2752 aaKnown RBP0.25□□□□□ -2.37
GIN1-206ENST00000513603 USP9YO00507 2555 aaPredicted RBP0.25□□□□□ -2.37
GIN1-206ENST00000513603 DOPEY1Q5JWR5 2465 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 SONP18583 2426 aaKnown RBP0.25□□□□□ -2.37
GIN1-206ENST00000513603 HSPG2P98160 4391 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 TRRAPQ9Y4A5 3859 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 C9orf92A6NGG3 77 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 CELSR3Q9NYQ7 3312 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 CENPEQ02224 2701 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 FLNCQ14315 2725 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 DNAH9Q9NYC9 4486 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 SPTBN4Q9H254 2564 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 MYO9AB2RTY4 2548 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 USP34Q70CQ2 3546 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 DCHS1Q96JQ0 3298 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 DNAH10Q8IVF4 4471 aa0.25□□□□□ -2.37
GIN1-206ENST00000513603 PDZD2O15018 2839 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 HIVEP1P15822 2718 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 VPS13CQ709C8 3753 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 SETD2Q9BYW2 2564 aaPredicted RBP0.24□□□□□ -2.37
GIN1-206ENST00000513603 TLN2Q9Y4G6 2542 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 RELNP78509 3460 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 DNAH2Q9P225 4427 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 HECTD4Q9Y4D8 3996 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 LYSTQ99698 3801 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 DNAH8Q96JB1 4490 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 ZANQ9Y493 2812 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 ANK3Q12955 4377 aaKnown RBP0.24□□□□□ -2.37
GIN1-206ENST00000513603 VPS13DQ5THJ4 4388 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 ITPR2Q14571 2701 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 CFAP46Q8IYW2 2715 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 ANKRD11Q6UB99 2663 aaPredicted RBP0.24□□□□□ -2.37
GIN1-206ENST00000513603 NSD1Q96L73 2696 aaPredicted RBP0.24□□□□□ -2.37
GIN1-206ENST00000513603 VCANP13611 3396 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 TLN1Q9Y490 2541 aaKnown RBP0.24□□□□□ -2.37
GIN1-206ENST00000513603 DNAH5Q8TE73 4624 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 SVEP1Q4LDE5 3571 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 ZFHX4Q86UP3 3567 aa0.24□□□□□ -2.37
GIN1-206ENST00000513603 DNAH3Q8TD57 4116 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 ASPMQ8IZT6 3477 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 DYNC2H1Q8NCM8 4307 aaKnown RBP0.23□□□□□ -2.37
GIN1-206ENST00000513603 FASNP49327 2511 aaKnown RBP0.23□□□□□ -2.37
GIN1-206ENST00000513603 PLECQ15149 4684 aaKnown RBP0.23□□□□□ -2.37
GIN1-206ENST00000513603 MYO15AQ9UKN7 3530 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 SPG11Q96JI7 2443 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 SZT2Q5T011 3432 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 MXRA5Q9NR99 2828 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 UNC80Q8N2C7 3258 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 DNAH6Q9C0G6 4158 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 FAT3Q8TDW7 4589 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 SACSQ9NZJ4 4579 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 VPS13BQ7Z7G8 4022 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 DNAH7Q8WXX0 4024 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 DNAH14Q0VDD8 3507 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 MYO18BQ8IUG5 2567 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 USP9XQ93008 2570 aaPredicted RBP0.23□□□□□ -2.37
GIN1-206ENST00000513603 STAB1Q9NY15 2570 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 MTORP42345 2549 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 BRCA2P51587 3418 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 DNAH1Q9P2D7 4330 aa0.23□□□□□ -2.37
GIN1-206ENST00000513603 SPEGQ15772 3267 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms