RNA–Protein interactions for RNA: ENST00000513603.1

GIN1-206, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 2

Gene GIN1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-206ENST00000513603 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
GIN1-206ENST00000513603 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
GIN1-206ENST00000513603 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
GIN1-206ENST00000513603 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
GIN1-206ENST00000513603 FOXD1Q16676 465 aa20.18■□□□□ 0.82
GIN1-206ENST00000513603 MSH5O43196 834 aa18.96■□□□□ 0.63
GIN1-206ENST00000513603 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
GIN1-206ENST00000513603 POTEDQ86YR6 584 aa18.87■□□□□ 0.61
GIN1-206ENST00000513603 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
GIN1-206ENST00000513603 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
GIN1-206ENST00000513603 ADRA2BP18089 450 aa18.64■□□□□ 0.57
GIN1-206ENST00000513603 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
GIN1-206ENST00000513603 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
GIN1-206ENST00000513603 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
GIN1-206ENST00000513603 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.24
GIN1-206ENST00000513603 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
GIN1-206ENST00000513603 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
GIN1-206ENST00000513603 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
GIN1-206ENST00000513603 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
GIN1-206ENST00000513603 KCNA4P22459 653 aa16.26■□□□□ 0.19
GIN1-206ENST00000513603 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
GIN1-206ENST00000513603 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
GIN1-206ENST00000513603 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
GIN1-206ENST00000513603 C1QBPQ07021 282 aaKnown RBP15.91■□□□□ 0.14
GIN1-206ENST00000513603 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
GIN1-206ENST00000513603 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
GIN1-206ENST00000513603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
GIN1-206ENST00000513603 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
GIN1-206ENST00000513603 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
GIN1-206ENST00000513603 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
GIN1-206ENST00000513603 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
GIN1-206ENST00000513603 CAPN15O75808 1086 aa15.12■□□□□ 0.01
GIN1-206ENST00000513603 DSG3P32926 999 aa15.06■□□□□ 0
GIN1-206ENST00000513603 ZBTB22O15209 634 aa15.05■□□□□ -0
GIN1-206ENST00000513603 SLC4A2P04920 1241 aa15.03■□□□□ -0
GIN1-206ENST00000513603 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
GIN1-206ENST00000513603 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
GIN1-206ENST00000513603 APLP2Q06481 763 aa14.82□□□□□ -0.04
GIN1-206ENST00000513603 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
GIN1-206ENST00000513603 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
GIN1-206ENST00000513603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
GIN1-206ENST00000513603 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
GIN1-206ENST00000513603 ABCB7O75027 752 aa14.75□□□□□ -0.05
GIN1-206ENST00000513603 POTEHQ6S545 545 aa14.75□□□□□ -0.05
GIN1-206ENST00000513603 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
GIN1-206ENST00000513603 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
GIN1-206ENST00000513603 POLA2Q14181 598 aa14.38□□□□□ -0.11
GIN1-206ENST00000513603 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
GIN1-206ENST00000513603 ATF5Q9Y2D1 282 aaPredicted RBP14.32□□□□□ -0.12
GIN1-206ENST00000513603 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
GIN1-206ENST00000513603 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
GIN1-206ENST00000513603 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
GIN1-206ENST00000513603 AKT1S1Q96B36 256 aa14□□□□□ -0.17
GIN1-206ENST00000513603 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
GIN1-206ENST00000513603 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
GIN1-206ENST00000513603 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
GIN1-206ENST00000513603 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
GIN1-206ENST00000513603 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
GIN1-206ENST00000513603 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
GIN1-206ENST00000513603 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.23
GIN1-206ENST00000513603 FBLN2P98095 1184 aa13.64□□□□□ -0.23
GIN1-206ENST00000513603 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
GIN1-206ENST00000513603 HAX1O00165 279 aa13.6□□□□□ -0.23
GIN1-206ENST00000513603 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
GIN1-206ENST00000513603 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
GIN1-206ENST00000513603 FKBP8Q14318 412 aa13.49□□□□□ -0.25
GIN1-206ENST00000513603 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
GIN1-206ENST00000513603 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
GIN1-206ENST00000513603 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
GIN1-206ENST00000513603 EVX2Q03828 476 aa13.39□□□□□ -0.27
GIN1-206ENST00000513603 SSUH2Q9Y2M2 353 aa13.39□□□□□ -0.27
GIN1-206ENST00000513603 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
GIN1-206ENST00000513603 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
GIN1-206ENST00000513603 C19orf67A6NJJ6 358 aa13.22□□□□□ -0.29
GIN1-206ENST00000513603 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
GIN1-206ENST00000513603 CHADLQ6NUI6 762 aa13.19□□□□□ -0.3
GIN1-206ENST00000513603 PRR29P0C7W0 189 aa13.17□□□□□ -0.3
GIN1-206ENST00000513603 PROM2Q8N271 834 aa13.16□□□□□ -0.3
GIN1-206ENST00000513603 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
GIN1-206ENST00000513603 GABBR2O75899 941 aa13.08□□□□□ -0.32
GIN1-206ENST00000513603 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
GIN1-206ENST00000513603 CD44P16070 742 aaKnown RBP12.94□□□□□ -0.34
GIN1-206ENST00000513603 AMER1Q5JTC6 1135 aaPredicted RBP12.89□□□□□ -0.35
GIN1-206ENST00000513603 LHX8Q68G74 356 aa12.88□□□□□ -0.35
GIN1-206ENST00000513603 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
GIN1-206ENST00000513603 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
GIN1-206ENST00000513603 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
GIN1-206ENST00000513603 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
GIN1-206ENST00000513603 CLCN6P51797 869 aa12.79□□□□□ -0.36
GIN1-206ENST00000513603 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
GIN1-206ENST00000513603 VASPP50552 380 aaPredicted RBP12.77□□□□□ -0.37
GIN1-206ENST00000513603 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
GIN1-206ENST00000513603 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
GIN1-206ENST00000513603 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
GIN1-206ENST00000513603 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
GIN1-206ENST00000513603 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
GIN1-206ENST00000513603 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
GIN1-206ENST00000513603 MIER1Q8N108 512 aa12.58□□□□□ -0.4
GIN1-206ENST00000513603 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
GIN1-206ENST00000513603 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms