RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
CCL28-203ENST00000513525 NOTCH2NLQ7Z3S9 236 aa5.36□□□□□ -1.55
CCL28-203ENST00000513525 LINC00313P59037 77 aa5.35□□□□□ -1.55
CCL28-203ENST00000513525 NDUFS5O43920 106 aa5.34□□□□□ -1.55
CCL28-203ENST00000513525 C1orf64Q8NEQ6 169 aa5.34□□□□□ -1.55
CCL28-203ENST00000513525 C9orf92A6NGG3 77 aa5.33□□□□□ -1.56
CCL28-203ENST00000513525 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
CCL28-203ENST00000513525 Q8N9P0 234 aaPredicted RBP5.31□□□□□ -1.56
CCL28-203ENST00000513525 PCOTHQ58A44 107 aa5.3□□□□□ -1.56
CCL28-203ENST00000513525 CYP4F30PQ9H0H9 118 aa5.3□□□□□ -1.56
CCL28-203ENST00000513525 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
CCL28-203ENST00000513525 KRTAP19-2Q3LHN2 52 aa5.29□□□□□ -1.56
CCL28-203ENST00000513525 LOC101927531A0A1B0GV80 90 aa5.28□□□□□ -1.56
CCL28-203ENST00000513525 SMIM26A0A096LP01 95 aa5.25□□□□□ -1.57
CCL28-203ENST00000513525 RPL37P61927 97 aaKnown RBP5.25□□□□□ -1.57
CCL28-203ENST00000513525 Q5W150 140 aa5.25□□□□□ -1.57
CCL28-203ENST00000513525 MT1HP80294 61 aa5.23□□□□□ -1.57
CCL28-203ENST00000513525 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.22□□□□□ -1.57
CCL28-203ENST00000513525 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
CCL28-203ENST00000513525 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
CCL28-203ENST00000513525 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
CCL28-203ENST00000513525 C20orf166-AS1Q96NR2 134 aa5.17□□□□□ -1.58
CCL28-203ENST00000513525 A8MUU9 505 aa5.16□□□□□ -1.58
CCL28-203ENST00000513525 Q75L30 129 aa5.16□□□□□ -1.58
CCL28-203ENST00000513525 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.58
CCL28-203ENST00000513525 COX6B2Q6YFQ2 88 aa5.13□□□□□ -1.59
CCL28-203ENST00000513525 HRES1P13985 223 aa5.13□□□□□ -1.59
CCL28-203ENST00000513525 ATP11AUNQ6ZP68 121 aa5.13□□□□□ -1.59
CCL28-203ENST00000513525 COA5Q86WW8 74 aa5.13□□□□□ -1.59
CCL28-203ENST00000513525 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
CCL28-203ENST00000513525 M0R2T5 61 aa5.11□□□□□ -1.59
CCL28-203ENST00000513525 Q1T7F1 81 aa5.11□□□□□ -1.59
CCL28-203ENST00000513525 C7orf65Q6ZTY9 151 aa5.11□□□□□ -1.59
CCL28-203ENST00000513525 DMAC1Q96GE9 116 aa5.11□□□□□ -1.59
CCL28-203ENST00000513525 V9GYY9 64 aa5.11□□□□□ -1.59
CCL28-203ENST00000513525 IGKV2D-30A0A075B6S6 120 aa5.1□□□□□ -1.59
CCL28-203ENST00000513525 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
CCL28-203ENST00000513525 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
CCL28-203ENST00000513525 ACYP2P14621 99 aa5.09□□□□□ -1.59
CCL28-203ENST00000513525 C4orf26Q17RF5 130 aa5.09□□□□□ -1.59
CCL28-203ENST00000513525 MPLKIPQ8TAP9 179 aa5.07□□□□□ -1.6
CCL28-203ENST00000513525 A8MUN3 132 aa5.03□□□□□ -1.6
CCL28-203ENST00000513525 KRTAP5-11Q6L8G4 156 aa5.02□□□□□ -1.61
CCL28-203ENST00000513525 CHKB-CPT1BH3BT56 60 aa5□□□□□ -1.61
CCL28-203ENST00000513525 SPINK7P58062 85 aa5□□□□□ -1.61
CCL28-203ENST00000513525 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
CCL28-203ENST00000513525 PSPHP1O15172 72 aa4.96□□□□□ -1.62
CCL28-203ENST00000513525 PRR15LQ9BU68 103 aa4.95□□□□□ -1.62
CCL28-203ENST00000513525 Q5VV11 94 aa4.94□□□□□ -1.62
CCL28-203ENST00000513525 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
CCL28-203ENST00000513525 SPTSSBQ8NFR3 76 aa4.92□□□□□ -1.62
CCL28-203ENST00000513525 RBM12B-AS1Q9P1G2 102 aa4.91□□□□□ -1.62
CCL28-203ENST00000513525 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
CCL28-203ENST00000513525 BRK1Q8WUW1 75 aa4.87□□□□□ -1.63
CCL28-203ENST00000513525 MT2AP02795 61 aa4.87□□□□□ -1.63
CCL28-203ENST00000513525 USH2AO75445 5202 aa4.87□□□□□ -1.63
CCL28-203ENST00000513525 A0A1B0GU69 56 aa4.85□□□□□ -1.63
CCL28-203ENST00000513525 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
CCL28-203ENST00000513525 A6NED7 52 aa4.82□□□□□ -1.64
CCL28-203ENST00000513525 MT1FP04733 61 aa4.82□□□□□ -1.64
CCL28-203ENST00000513525 SEC61GP60059 68 aa4.8□□□□□ -1.64
CCL28-203ENST00000513525 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
CCL28-203ENST00000513525 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
CCL28-203ENST00000513525 H1FX-AS1Q4G0G2 97 aa4.76□□□□□ -1.65
CCL28-203ENST00000513525 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
CCL28-203ENST00000513525 LCA10Q71F78 164 aa4.76□□□□□ -1.65
CCL28-203ENST00000513525 UQCR11O14957 56 aa4.74□□□□□ -1.65
CCL28-203ENST00000513525 S4R3F8 94 aa4.74□□□□□ -1.65
CCL28-203ENST00000513525 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
CCL28-203ENST00000513525 SPATA8Q6RVD6 105 aa4.72□□□□□ -1.65
CCL28-203ENST00000513525 KRTAP2-2Q9BYT5 123 aa4.71□□□□□ -1.66
CCL28-203ENST00000513525 A8MU10 97 aa4.7□□□□□ -1.66
CCL28-203ENST00000513525 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
CCL28-203ENST00000513525 A0A1B0GU33 70 aa4.66□□□□□ -1.66
CCL28-203ENST00000513525 KRTAP19-6Q3LI70 58 aa4.65□□□□□ -1.67
CCL28-203ENST00000513525 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
CCL28-203ENST00000513525 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
CCL28-203ENST00000513525 A6NN06 94 aa4.59□□□□□ -1.67
CCL28-203ENST00000513525 H0YAA0 97 aa4.59□□□□□ -1.67
CCL28-203ENST00000513525 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.68
CCL28-203ENST00000513525 ADM2Q7Z4H4 148 aa4.54□□□□□ -1.68
CCL28-203ENST00000513525 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
CCL28-203ENST00000513525 P0C880 135 aa4.51□□□□□ -1.69
CCL28-203ENST00000513525 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
CCL28-203ENST00000513525 K7ERS5 55 aa4.48□□□□□ -1.69
CCL28-203ENST00000513525 M0QZ58 72 aa4.48□□□□□ -1.69
CCL28-203ENST00000513525 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
CCL28-203ENST00000513525 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
CCL28-203ENST00000513525 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
CCL28-203ENST00000513525 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
CCL28-203ENST00000513525 MT1BP07438 61 aa4.42□□□□□ -1.7
CCL28-203ENST00000513525 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
CCL28-203ENST00000513525 A0A0D9SG42 100 aa4.4□□□□□ -1.71
CCL28-203ENST00000513525 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
CCL28-203ENST00000513525 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
CCL28-203ENST00000513525 R4GN34 69 aa4.37□□□□□ -1.71
CCL28-203ENST00000513525 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
CCL28-203ENST00000513525 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
CCL28-203ENST00000513525 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
CCL28-203ENST00000513525 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms