RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 KIAA1109Q2LD37 5005 aa7.89□□□□□ -1.15
DDR1-271ENST00000513240 FAT3Q8TDW7 4589 aa7.89□□□□□ -1.15
DDR1-271ENST00000513240 H1FX-AS1Q4G0G2 97 aa7.85□□□□□ -1.15
DDR1-271ENST00000513240 KRTAP17-1Q9BYP8 105 aa7.84□□□□□ -1.15
DDR1-271ENST00000513240 KRTAP3-1Q9BYR8 98 aa7.82□□□□□ -1.16
DDR1-271ENST00000513240 K7ERS5 55 aa7.8□□□□□ -1.16
DDR1-271ENST00000513240 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
DDR1-271ENST00000513240 TNXBP22105 4242 aa7.78□□□□□ -1.16
DDR1-271ENST00000513240 LPAP08519 4548 aa7.78□□□□□ -1.16
DDR1-271ENST00000513240 A0A0A0MQY5 61 aa7.77□□□□□ -1.16
DDR1-271ENST00000513240 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
DDR1-271ENST00000513240 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
DDR1-271ENST00000513240 Q5VSD8 79 aa7.74□□□□□ -1.17
DDR1-271ENST00000513240 EPPK1P58107 5090 aaKnown RBP7.72□□□□□ -1.17
DDR1-271ENST00000513240 RYR1P21817 5038 aa7.72□□□□□ -1.17
DDR1-271ENST00000513240 KRTAP21-3Q3LHN1 58 aa7.72□□□□□ -1.17
DDR1-271ENST00000513240 COX6B2Q6YFQ2 88 aa7.7□□□□□ -1.18
DDR1-271ENST00000513240 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
DDR1-271ENST00000513240 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
DDR1-271ENST00000513240 LRP2P98164 4655 aa7.66□□□□□ -1.18
DDR1-271ENST00000513240 A0A0D9SG42 100 aa7.64□□□□□ -1.19
DDR1-271ENST00000513240 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
DDR1-271ENST00000513240 ABCA13Q86UQ4 5058 aa7.63□□□□□ -1.19
DDR1-271ENST00000513240 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
DDR1-271ENST00000513240 XP32Q5T750 250 aa7.54□□□□□ -1.2
DDR1-271ENST00000513240 J3QL48 77 aa7.53□□□□□ -1.2
DDR1-271ENST00000513240 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
DDR1-271ENST00000513240 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
DDR1-271ENST00000513240 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
DDR1-271ENST00000513240 KRTAP3-3Q9BYR6 98 aa7.44□□□□□ -1.22
DDR1-271ENST00000513240 KRTAP10-6P60371 365 aaPredicted RBP7.41□□□□□ -1.22
DDR1-271ENST00000513240 MUC2Q02817 5179 aa7.39□□□□□ -1.23
DDR1-271ENST00000513240 LUZP6Q538Z0 58 aa7.38□□□□□ -1.23
DDR1-271ENST00000513240 S4R3F8 94 aa7.36□□□□□ -1.23
DDR1-271ENST00000513240 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
DDR1-271ENST00000513240 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
DDR1-271ENST00000513240 HERC2O95714 4834 aa7.24□□□□□ -1.25
DDR1-271ENST00000513240 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
DDR1-271ENST00000513240 HERC1Q15751 4861 aa7.11□□□□□ -1.27
DDR1-271ENST00000513240 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
DDR1-271ENST00000513240 PLAC4Q8WY50 150 aa7.05□□□□□ -1.28
DDR1-271ENST00000513240 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.28
DDR1-271ENST00000513240 MUC17Q685J3 4493 aa7.02□□□□□ -1.29
DDR1-271ENST00000513240 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
DDR1-271ENST00000513240 M0QZ58 72 aa6.98□□□□□ -1.29
DDR1-271ENST00000513240 PCLOQ9Y6V0 5065 aa6.96□□□□□ -1.3
DDR1-271ENST00000513240 RNF213Q63HN8 5207 aa6.93□□□□□ -1.3
DDR1-271ENST00000513240 R4GN34 69 aa6.9□□□□□ -1.3
DDR1-271ENST00000513240 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
DDR1-271ENST00000513240 BIRC6Q9NR09 4857 aa6.81□□□□□ -1.32
DDR1-271ENST00000513240 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
DDR1-271ENST00000513240 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.34
DDR1-271ENST00000513240 KRTAP19-2Q3LHN2 52 aa6.71□□□□□ -1.34
DDR1-271ENST00000513240 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
DDR1-271ENST00000513240 CAMK2N1Q7Z7J9 78 aa6.6□□□□□ -1.35
DDR1-271ENST00000513240 M0R2T5 61 aa6.51□□□□□ -1.37
DDR1-271ENST00000513240 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
DDR1-271ENST00000513240 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
DDR1-271ENST00000513240 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
DDR1-271ENST00000513240 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
DDR1-271ENST00000513240 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
DDR1-271ENST00000513240 MT1HP80294 61 aa6.26□□□□□ -1.41
DDR1-271ENST00000513240 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
DDR1-271ENST00000513240 MT1FP04733 61 aa6.21□□□□□ -1.42
DDR1-271ENST00000513240 USH2AO75445 5202 aa6.21□□□□□ -1.42
DDR1-271ENST00000513240 TNP1P09430 55 aa6.18□□□□□ -1.42
DDR1-271ENST00000513240 MT2AP02795 61 aa6.15□□□□□ -1.42
DDR1-271ENST00000513240 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
DDR1-271ENST00000513240 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
DDR1-271ENST00000513240 INE1O15225 51 aa6.06□□□□□ -1.44
DDR1-271ENST00000513240 KMT2DO14686 5537 aa6.05□□□□□ -1.44
DDR1-271ENST00000513240 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
DDR1-271ENST00000513240 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
DDR1-271ENST00000513240 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
DDR1-271ENST00000513240 MT1BP07438 61 aa5.9□□□□□ -1.46
DDR1-271ENST00000513240 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
DDR1-271ENST00000513240 MT1XP80297 61 aa5.85□□□□□ -1.47
DDR1-271ENST00000513240 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
DDR1-271ENST00000513240 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
DDR1-271ENST00000513240 KRTAP19-8Q3LI54 63 aa5.78□□□□□ -1.48
DDR1-271ENST00000513240 LCE2BO14633 110 aa5.71□□□□□ -1.5
DDR1-271ENST00000513240 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.5
DDR1-271ENST00000513240 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
DDR1-271ENST00000513240 KRTAP12-3P60328 96 aa5.65□□□□□ -1.5
DDR1-271ENST00000513240 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
DDR1-271ENST00000513240 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
DDR1-271ENST00000513240 KRTAP8-1Q8IUC2 63 aa5.61□□□□□ -1.51
DDR1-271ENST00000513240 LCE2AQ5TA79 106 aaPredicted RBP5.54□□□□□ -1.52
DDR1-271ENST00000513240 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
DDR1-271ENST00000513240 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
DDR1-271ENST00000513240 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
DDR1-271ENST00000513240 MUC12Q9UKN1 5478 aa5.32□□□□□ -1.56
DDR1-271ENST00000513240 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
DDR1-271ENST00000513240 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
DDR1-271ENST00000513240 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
DDR1-271ENST00000513240 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
DDR1-271ENST00000513240 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
DDR1-271ENST00000513240 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
DDR1-271ENST00000513240 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
DDR1-271ENST00000513240 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms