RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PRR15Q8IV56 129 aa4.58□□□□□ -1.68
NUP54-211ENST00000512151 TMEM254Q8TBM7 123 aa4.58□□□□□ -1.68
NUP54-211ENST00000512151 NDUFB1O75438 58 aa4.57□□□□□ -1.68
NUP54-211ENST00000512151 C5orf47Q569G3 176 aa4.57□□□□□ -1.68
NUP54-211ENST00000512151 KMT2DO14686 5537 aa4.56□□□□□ -1.68
NUP54-211ENST00000512151 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
NUP54-211ENST00000512151 SNURFQ9Y675 71 aa4.56□□□□□ -1.68
NUP54-211ENST00000512151 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
NUP54-211ENST00000512151 H3BPC8 53 aa4.55□□□□□ -1.68
NUP54-211ENST00000512151 FAM236DA0A1B0GTK5 79 aa4.54□□□□□ -1.68
NUP54-211ENST00000512151 FAM236CP0DP71 79 aa4.54□□□□□ -1.68
NUP54-211ENST00000512151 CASC2Q6XLA1 102 aa4.54□□□□□ -1.68
NUP54-211ENST00000512151 WFDC13Q8IUB5 93 aa4.53□□□□□ -1.68
NUP54-211ENST00000512151 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.69
NUP54-211ENST00000512151 MMP24-AS1A0A0U1RRL7 71 aa4.53□□□□□ -1.69
NUP54-211ENST00000512151 A0A1B0GVX0 72 aa4.53□□□□□ -1.69
NUP54-211ENST00000512151 ZCCHC13Q8WW36 166 aaKnown RBP4.53□□□□□ -1.69
NUP54-211ENST00000512151 KRTAP16-1A8MUX0 517 aa4.52□□□□□ -1.69
NUP54-211ENST00000512151 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
NUP54-211ENST00000512151 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
NUP54-211ENST00000512151 TP53AIP1Q9HCN2 124 aa4.52□□□□□ -1.69
NUP54-211ENST00000512151 LINC00313P59037 77 aa4.51□□□□□ -1.69
NUP54-211ENST00000512151 MP68P56378 58 aa4.5□□□□□ -1.69
NUP54-211ENST00000512151 ATP11AUNQ6ZP68 121 aa4.5□□□□□ -1.69
NUP54-211ENST00000512151 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
NUP54-211ENST00000512151 C8orf17Q9NRJ1 99 aa4.5□□□□□ -1.69
NUP54-211ENST00000512151 hDV103S1A0JD37 113 aa4.49□□□□□ -1.69
NUP54-211ENST00000512151 SERP1Q9Y6X1 66 aa4.49□□□□□ -1.69
NUP54-211ENST00000512151 C8orf87E5RJ46 101 aa4.48□□□□□ -1.69
NUP54-211ENST00000512151 Q75L30 129 aa4.48□□□□□ -1.69
NUP54-211ENST00000512151 KRTAP3-1Q9BYR8 98 aa4.47□□□□□ -1.69
NUP54-211ENST00000512151 A8MUU9 505 aa4.46□□□□□ -1.7
NUP54-211ENST00000512151 H0Y9P7 68 aa4.45□□□□□ -1.7
NUP54-211ENST00000512151 KRTAP5-9P26371 169 aa4.45□□□□□ -1.7
NUP54-211ENST00000512151 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
NUP54-211ENST00000512151 TRAV22A0A0B4J277 110 aa4.44□□□□□ -1.7
NUP54-211ENST00000512151 LINC00208Q96KT6 92 aa4.44□□□□□ -1.7
NUP54-211ENST00000512151 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
NUP54-211ENST00000512151 SPANXA2-OT1Q8N9U9 137 aa4.43□□□□□ -1.7
NUP54-211ENST00000512151 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
NUP54-211ENST00000512151 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
NUP54-211ENST00000512151 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.7
NUP54-211ENST00000512151 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
NUP54-211ENST00000512151 NDUFS5O43920 106 aa4.39□□□□□ -1.71
NUP54-211ENST00000512151 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
NUP54-211ENST00000512151 LOC101927531A0A1B0GV80 90 aa4.36□□□□□ -1.71
NUP54-211ENST00000512151 HRES1P13985 223 aa4.36□□□□□ -1.71
NUP54-211ENST00000512151 Q5W150 140 aa4.36□□□□□ -1.71
NUP54-211ENST00000512151 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
NUP54-211ENST00000512151 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
NUP54-211ENST00000512151 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
NUP54-211ENST00000512151 A6NN06 94 aa4.32□□□□□ -1.72
NUP54-211ENST00000512151 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
NUP54-211ENST00000512151 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
NUP54-211ENST00000512151 C4orf26Q17RF5 130 aa4.31□□□□□ -1.72
NUP54-211ENST00000512151 V9GYY9 64 aa4.31□□□□□ -1.72
NUP54-211ENST00000512151 RBM12B-AS1Q9P1G2 102 aa4.3□□□□□ -1.72
NUP54-211ENST00000512151 SPINK7P58062 85 aa4.28□□□□□ -1.72
NUP54-211ENST00000512151 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
NUP54-211ENST00000512151 Q1T7F1 81 aa4.27□□□□□ -1.73
NUP54-211ENST00000512151 SPRR2EP22531 72 aa4.26□□□□□ -1.73
NUP54-211ENST00000512151 SPRR2BP35325 72 aa4.26□□□□□ -1.73
NUP54-211ENST00000512151 SPRR2AP35326 72 aa4.26□□□□□ -1.73
NUP54-211ENST00000512151 COA5Q86WW8 74 aa4.26□□□□□ -1.73
NUP54-211ENST00000512151 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
NUP54-211ENST00000512151 MT1BP07438 61 aa4.23□□□□□ -1.73
NUP54-211ENST00000512151 ACYP2P14621 99 aa4.23□□□□□ -1.73
NUP54-211ENST00000512151 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
NUP54-211ENST00000512151 C7orf65Q6ZTY9 151 aa4.22□□□□□ -1.73
NUP54-211ENST00000512151 DMAC1Q96GE9 116 aa4.21□□□□□ -1.74
NUP54-211ENST00000512151 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
NUP54-211ENST00000512151 A8MUN3 132 aa4.18□□□□□ -1.74
NUP54-211ENST00000512151 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
NUP54-211ENST00000512151 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
NUP54-211ENST00000512151 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.74
NUP54-211ENST00000512151 PSPHP1O15172 72 aa4.14□□□□□ -1.75
NUP54-211ENST00000512151 Q5VV11 94 aa4.14□□□□□ -1.75
NUP54-211ENST00000512151 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
NUP54-211ENST00000512151 PRR15LQ9BU68 103 aa4.13□□□□□ -1.75
NUP54-211ENST00000512151 CHKB-CPT1BH3BT56 60 aa4.12□□□□□ -1.75
NUP54-211ENST00000512151 SPRR2DP22532 72 aa4.12□□□□□ -1.75
NUP54-211ENST00000512151 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
NUP54-211ENST00000512151 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
NUP54-211ENST00000512151 H1FX-AS1Q4G0G2 97 aa4.09□□□□□ -1.75
NUP54-211ENST00000512151 SPTSSBQ8NFR3 76 aa4.09□□□□□ -1.75
NUP54-211ENST00000512151 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
NUP54-211ENST00000512151 A6NED7 52 aa4.02□□□□□ -1.77
NUP54-211ENST00000512151 A0A1B0GU69 56 aa4.02□□□□□ -1.77
NUP54-211ENST00000512151 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
NUP54-211ENST00000512151 LCA10Q71F78 164 aa4.02□□□□□ -1.77
NUP54-211ENST00000512151 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
NUP54-211ENST00000512151 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
NUP54-211ENST00000512151 S4R3F8 94 aa4.01□□□□□ -1.77
NUP54-211ENST00000512151 SEC61GP60059 68 aa3.99□□□□□ -1.77
NUP54-211ENST00000512151 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
NUP54-211ENST00000512151 A8MU10 97 aa3.98□□□□□ -1.77
NUP54-211ENST00000512151 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
NUP54-211ENST00000512151 UQCR11O14957 56 aa3.96□□□□□ -1.78
NUP54-211ENST00000512151 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
NUP54-211ENST00000512151 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms