RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 TMEM167BQ9NRX6 74 aa-0.42□□□□□ -2.48
NPHP3-210ENST00000512094 HILPDAQ9Y5L2 63 aa-0.42□□□□□ -2.48
NPHP3-210ENST00000512094 SMARCA2P51531 1590 aa-0.42□□□□□ -2.48
NPHP3-210ENST00000512094 CCDC18Q5T9S5 1454 aa-0.42□□□□□ -2.48
NPHP3-210ENST00000512094 MADDQ8WXG6 1647 aa-0.42□□□□□ -2.48
NPHP3-210ENST00000512094 CLASP1Q7Z460 1538 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 DIP2AQ14689 1571 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 CFAP74Q9C0B2 1584 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 M0R1W7 72 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 LINC00308Q8TCZ7 52 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 S100ZQ8WXG8 99 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 LEAP2Q969E1 77 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 HYDINQ4G0P3 5121 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 ANK3Q12955 4377 aaKnown RBP-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 KIAA1109Q2LD37 5005 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 RYR3Q15413 4870 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 MED14O60244 1454 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 RYR1P21817 5038 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 FAM208AQ9UK61 1670 aaKnown RBP-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 ASXL1Q8IXJ9 1541 aa-0.43□□□□□ -2.48
NPHP3-210ENST00000512094 GLI2P10070 1586 aa-0.44□□□□□ -2.48
NPHP3-210ENST00000512094 TIAM1Q13009 1591 aa-0.44□□□□□ -2.48
NPHP3-210ENST00000512094 RPS29P62273 56 aaKnown RBP-0.44□□□□□ -2.48
NPHP3-210ENST00000512094 DEFB136Q30KP8 78 aa-0.44□□□□□ -2.48
NPHP3-210ENST00000512094 CSMD1Q96PZ7 3565 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 EEA1Q15075 1411 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 BOD1L1Q8NFC6 3051 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 CROCC2H7BZ55 1655 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 LINC01549A6NIU2 74 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 POLR2KP53803 58 aaKnown RBP-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 EFCAB6Q5THR3 1501 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 CEP250Q9BV73 2442 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 RB1CC1Q8TDY2 1594 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 DNAH11Q96DT5 4516 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 FAT3Q8TDW7 4589 aa-0.45□□□□□ -2.48
NPHP3-210ENST00000512094 DEFB131AP59861 70 aa-0.46□□□□□ -2.48
NPHP3-210ENST00000512094 PRUNE2Q8WUY3 3088 aa-0.46□□□□□ -2.48
NPHP3-210ENST00000512094 DNAH1Q9P2D7 4330 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 PLECQ15149 4684 aaKnown RBP-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 RYR2Q92736 4967 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 DNAH2Q9P225 4427 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 DUOX2Q9NRD8 1548 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 ABCA8O94911 1581 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 H0YGX0 51 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 PDCD5O14737 125 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 SMCO4Q9NRQ5 59 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 KIF21BO75037 1637 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 BIRC6Q9NR09 4857 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 ALS2Q96Q42 1657 aa-0.47□□□□□ -2.48
NPHP3-210ENST00000512094 CSMD2Q7Z408 3487 aa-0.47□□□□□ -2.49
NPHP3-210ENST00000512094 FREM2Q5SZK8 3169 aa-0.48□□□□□ -2.49
NPHP3-210ENST00000512094 ABCA9Q8IUA7 1624 aa-0.48□□□□□ -2.49
NPHP3-210ENST00000512094 CMYA5Q8N3K9 4069 aa-0.48□□□□□ -2.49
NPHP3-210ENST00000512094 PLNP26678 52 aa-0.48□□□□□ -2.49
NPHP3-210ENST00000512094 TRRAPQ9Y4A5 3859 aa-0.48□□□□□ -2.49
NPHP3-210ENST00000512094 CRYBG3Q68DQ2 2970 aa-0.48□□□□□ -2.49
NPHP3-210ENST00000512094 UGGT2Q9NYU1 1516 aa-0.48□□□□□ -2.49
NPHP3-210ENST00000512094 CFAP54Q96N23 3096 aa-0.49□□□□□ -2.49
NPHP3-210ENST00000512094 UGGT1Q9NYU2 1555 aa-0.49□□□□□ -2.49
NPHP3-210ENST00000512094 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.49□□□□□ -2.49
NPHP3-210ENST00000512094 KRTAP20-1Q3LI63 56 aa-0.49□□□□□ -2.49
NPHP3-210ENST00000512094 RNF213Q63HN8 5207 aa-0.49□□□□□ -2.49
NPHP3-210ENST00000512094 IQGAP3Q86VI3 1631 aa-0.49□□□□□ -2.49
NPHP3-210ENST00000512094 ABCA6Q8N139 1617 aa-0.49□□□□□ -2.49
NPHP3-210ENST00000512094 MROH2AA6NES4 1674 aa-0.49□□□□□ -2.49
NPHP3-210ENST00000512094 SPTBN5Q9NRC6 3674 aaKnown RBP-0.5□□□□□ -2.49
NPHP3-210ENST00000512094 SACSQ9NZJ4 4579 aa-0.5□□□□□ -2.49
NPHP3-210ENST00000512094 IGIPA6NJ69 53 aa-0.5□□□□□ -2.49
NPHP3-210ENST00000512094 CENPEQ02224 2701 aa-0.5□□□□□ -2.49
NPHP3-210ENST00000512094 CPS1P31327 1500 aa-0.5□□□□□ -2.49
NPHP3-210ENST00000512094 ZFHX4Q86UP3 3567 aa-0.5□□□□□ -2.49
NPHP3-210ENST00000512094 APOBP04114 4563 aaKnown RBP-0.51□□□□□ -2.49
NPHP3-210ENST00000512094 TFF3Q07654 80 aa-0.51□□□□□ -2.49
NPHP3-210ENST00000512094 SMIM5Q71RC9 77 aa-0.51□□□□□ -2.49
NPHP3-210ENST00000512094 DNAH7Q8WXX0 4024 aa-0.51□□□□□ -2.49
NPHP3-210ENST00000512094 DNHD1Q96M86 4753 aa-0.51□□□□□ -2.49
NPHP3-210ENST00000512094 SMIM2Q9BVW6 85 aa-0.51□□□□□ -2.49
NPHP3-210ENST00000512094 SYCP2Q9BX26 1530 aa-0.52□□□□□ -2.49
NPHP3-210ENST00000512094 MT1FP04733 61 aa-0.52□□□□□ -2.49
NPHP3-210ENST00000512094 TTTY10Q9BZA0 68 aa-0.52□□□□□ -2.49
NPHP3-210ENST00000512094 SPENQ96T58 3664 aaKnown RBP-0.52□□□□□ -2.49
NPHP3-210ENST00000512094 DNAH8Q96JB1 4490 aa-0.52□□□□□ -2.49
NPHP3-210ENST00000512094 LMO7Q8WWI1 1683 aa-0.53□□□□□ -2.49
NPHP3-210ENST00000512094 EFCAB5A4FU69 1503 aa-0.53□□□□□ -2.49
NPHP3-210ENST00000512094 AGLP35573 1532 aa-0.53□□□□□ -2.49
NPHP3-210ENST00000512094 SMG1Q96Q15 3661 aaKnown RBP-0.53□□□□□ -2.49
NPHP3-210ENST00000512094 CCDC180Q9P1Z9 1646 aa-0.53□□□□□ -2.49
NPHP3-210ENST00000512094 A0A087WWC5 75 aa-0.54□□□□□ -2.5
NPHP3-210ENST00000512094 SCRIBQ14160 1630 aa-0.54□□□□□ -2.5
NPHP3-210ENST00000512094 ABCA10Q8WWZ4 1543 aa-0.54□□□□□ -2.5
NPHP3-210ENST00000512094 FRYLO94915 3013 aa-0.54□□□□□ -2.5
NPHP3-210ENST00000512094 CLTCL1P53675 1640 aa-0.55□□□□□ -2.5
NPHP3-210ENST00000512094 KRTAP19-6Q3LI70 58 aa-0.55□□□□□ -2.5
NPHP3-210ENST00000512094 SPEGQ15772 3267 aa-0.55□□□□□ -2.5
NPHP3-210ENST00000512094 ABCA5Q8WWZ7 1642 aa-0.56□□□□□ -2.5
NPHP3-210ENST00000512094 NRXN3Q9Y4C0 1643 aa-0.56□□□□□ -2.5
NPHP3-210ENST00000512094 RHPN1-AS1Q9BWJ2 59 aa-0.56□□□□□ -2.5
NPHP3-210ENST00000512094 TOMM7Q9P0U1 55 aa-0.56□□□□□ -2.5
NPHP3-210ENST00000512094 TRPM2O94759 1503 aa-0.56□□□□□ -2.5
NPHP3-210ENST00000512094 DDX60Q8IY21 1712 aaKnown RBP-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms