RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
RNF4-216ENST00000511859 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
RNF4-216ENST00000511859 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
RNF4-216ENST00000511859 A6NN06 94 aa5.44□□□□□ -1.54
RNF4-216ENST00000511859 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
RNF4-216ENST00000511859 KMT2DO14686 5537 aa5.44□□□□□ -1.54
RNF4-216ENST00000511859 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
RNF4-216ENST00000511859 SPINK7P58062 85 aa5.4□□□□□ -1.55
RNF4-216ENST00000511859 Q5W150 140 aa5.4□□□□□ -1.55
RNF4-216ENST00000511859 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
RNF4-216ENST00000511859 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
RNF4-216ENST00000511859 TP53AIP1Q9HCN2 124 aa5.33□□□□□ -1.56
RNF4-216ENST00000511859 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
RNF4-216ENST00000511859 IMUPQ9GZP8 106 aa5.31□□□□□ -1.56
RNF4-216ENST00000511859 SCGB1A1P11684 91 aa5.3□□□□□ -1.56
RNF4-216ENST00000511859 PCP4P48539 62 aa5.3□□□□□ -1.56
RNF4-216ENST00000511859 FAM236AA0A1B0GUQ0 79 aa5.29□□□□□ -1.56
RNF4-216ENST00000511859 FAM236BA0A1B0GV22 79 aa5.29□□□□□ -1.56
RNF4-216ENST00000511859 TRAV22A0A0B4J277 110 aa5.29□□□□□ -1.56
RNF4-216ENST00000511859 C7orf65Q6ZTY9 151 aa5.29□□□□□ -1.56
RNF4-216ENST00000511859 UQCRQO14949 82 aa5.28□□□□□ -1.56
RNF4-216ENST00000511859 MT1BP07438 61 aa5.28□□□□□ -1.56
RNF4-216ENST00000511859 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
RNF4-216ENST00000511859 H0Y9P7 68 aa5.27□□□□□ -1.57
RNF4-216ENST00000511859 H1FX-AS1Q4G0G2 97 aa5.27□□□□□ -1.57
RNF4-216ENST00000511859 Q5VV11 94 aa5.27□□□□□ -1.57
RNF4-216ENST00000511859 OCR1Q9BZK8 76 aa5.27□□□□□ -1.57
RNF4-216ENST00000511859 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
RNF4-216ENST00000511859 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
RNF4-216ENST00000511859 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
RNF4-216ENST00000511859 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
RNF4-216ENST00000511859 C4orf26Q17RF5 130 aa5.21□□□□□ -1.58
RNF4-216ENST00000511859 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
RNF4-216ENST00000511859 LINC00208Q96KT6 92 aa5.21□□□□□ -1.58
RNF4-216ENST00000511859 LOC101927531A0A1B0GV80 90 aa5.2□□□□□ -1.58
RNF4-216ENST00000511859 ATOX1O00244 68 aa5.2□□□□□ -1.58
RNF4-216ENST00000511859 C1orf64Q8NEQ6 169 aa5.2□□□□□ -1.58
RNF4-216ENST00000511859 CYP4F30PQ9H0H9 118 aa5.2□□□□□ -1.58
RNF4-216ENST00000511859 SPRR2EP22531 72 aa5.19□□□□□ -1.58
RNF4-216ENST00000511859 SPRR2BP35325 72 aa5.19□□□□□ -1.58
RNF4-216ENST00000511859 SPRR2AP35326 72 aa5.19□□□□□ -1.58
RNF4-216ENST00000511859 MP68P56378 58 aa5.19□□□□□ -1.58
RNF4-216ENST00000511859 TRAV7A0A075B6U4 112 aa5.18□□□□□ -1.58
RNF4-216ENST00000511859 C5orf47Q569G3 176 aa5.18□□□□□ -1.58
RNF4-216ENST00000511859 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
RNF4-216ENST00000511859 SMIM20Q8N5G0 67 aa5.16□□□□□ -1.58
RNF4-216ENST00000511859 SPRR2FQ96RM1 72 aa5.16□□□□□ -1.58
RNF4-216ENST00000511859 KLKP1Q107X0 134 aa5.15□□□□□ -1.59
RNF4-216ENST00000511859 H3BPC8 53 aa5.12□□□□□ -1.59
RNF4-216ENST00000511859 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
RNF4-216ENST00000511859 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
RNF4-216ENST00000511859 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
RNF4-216ENST00000511859 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.6
RNF4-216ENST00000511859 C20orf197Q8N268 126 aa5.08□□□□□ -1.6
RNF4-216ENST00000511859 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
RNF4-216ENST00000511859 COX7CP15954 63 aa5.04□□□□□ -1.6
RNF4-216ENST00000511859 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
RNF4-216ENST00000511859 SPRR2DP22532 72 aa5.04□□□□□ -1.6
RNF4-216ENST00000511859 S4R3F8 94 aa5.04□□□□□ -1.6
RNF4-216ENST00000511859 LCA10Q71F78 164 aa5.01□□□□□ -1.61
RNF4-216ENST00000511859 CSAG1Q6PB30 78 aa5□□□□□ -1.61
RNF4-216ENST00000511859 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
RNF4-216ENST00000511859 A8MUN3 132 aa4.97□□□□□ -1.61
RNF4-216ENST00000511859 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
RNF4-216ENST00000511859 DMAC1Q96GE9 116 aa4.96□□□□□ -1.62
RNF4-216ENST00000511859 CYSTM1Q9H1C7 97 aa4.96□□□□□ -1.62
RNF4-216ENST00000511859 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
RNF4-216ENST00000511859 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
RNF4-216ENST00000511859 PRO2289Q9P1D8 64 aa4.92□□□□□ -1.62
RNF4-216ENST00000511859 NDUFC1O43677 76 aa4.91□□□□□ -1.62
RNF4-216ENST00000511859 ACYP2P14621 99 aa4.91□□□□□ -1.62
RNF4-216ENST00000511859 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.63
RNF4-216ENST00000511859 H7BZZ5 65 aa4.9□□□□□ -1.63
RNF4-216ENST00000511859 SPANXA2-OT1Q8N9U9 137 aa4.9□□□□□ -1.63
RNF4-216ENST00000511859 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
RNF4-216ENST00000511859 KRTAP12-2P59991 146 aa4.85□□□□□ -1.63
RNF4-216ENST00000511859 MT1XP80297 61 aa4.83□□□□□ -1.64
RNF4-216ENST00000511859 COA5Q86WW8 74 aa4.8□□□□□ -1.64
RNF4-216ENST00000511859 ADM2Q7Z4H4 148 aa4.78□□□□□ -1.64
RNF4-216ENST00000511859 SPTSSBQ8NFR3 76 aa4.78□□□□□ -1.64
RNF4-216ENST00000511859 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
RNF4-216ENST00000511859 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
RNF4-216ENST00000511859 H0YAA0 97 aa4.73□□□□□ -1.65
RNF4-216ENST00000511859 P0C880 135 aa4.72□□□□□ -1.65
RNF4-216ENST00000511859 ATP5EP56381 51 aaPredicted RBP4.72□□□□□ -1.65
RNF4-216ENST00000511859 TMEM258P61165 79 aa4.72□□□□□ -1.65
RNF4-216ENST00000511859 R4GN34 69 aa4.62□□□□□ -1.67
RNF4-216ENST00000511859 M0QZ58 72 aa4.61□□□□□ -1.67
RNF4-216ENST00000511859 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
RNF4-216ENST00000511859 SEC61GP60059 68 aa4.59□□□□□ -1.67
RNF4-216ENST00000511859 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
RNF4-216ENST00000511859 SERP1Q9Y6X1 66 aa4.59□□□□□ -1.67
RNF4-216ENST00000511859 LINC01554Q52M75 96 aa4.57□□□□□ -1.68
RNF4-216ENST00000511859 A0A1B0GU69 56 aa4.54□□□□□ -1.68
RNF4-216ENST00000511859 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
RNF4-216ENST00000511859 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.69
RNF4-216ENST00000511859 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
RNF4-216ENST00000511859 LINC01558Q9Y6Z2 57 aa4.5□□□□□ -1.69
RNF4-216ENST00000511859 A0A1B0GU33 70 aa4.49□□□□□ -1.69
RNF4-216ENST00000511859 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms