RNA–Protein interactions for RNA: ENST00000511782.5

CAST-236, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-236ENST00000511782 CSAG1Q6PB30 78 aa4.4□□□□□ -1.7
CAST-236ENST00000511782 A8MUU9 505 aa4.39□□□□□ -1.71
CAST-236ENST00000511782 C20orf166-AS1Q96NR2 134 aa4.38□□□□□ -1.71
CAST-236ENST00000511782 RPS29P62273 56 aaKnown RBP4.36□□□□□ -1.71
CAST-236ENST00000511782 KRTAP17-1Q9BYP8 105 aa4.34□□□□□ -1.71
CAST-236ENST00000511782 A0A1B0GU33 70 aa4.32□□□□□ -1.72
CAST-236ENST00000511782 A0A1B0GVY2 172 aa4.32□□□□□ -1.72
CAST-236ENST00000511782 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
CAST-236ENST00000511782 LRP2P98164 4655 aa4.3□□□□□ -1.72
CAST-236ENST00000511782 CRIPTQ9P021 101 aa4.29□□□□□ -1.72
CAST-236ENST00000511782 ROMO1P60602 79 aa4.28□□□□□ -1.72
CAST-236ENST00000511782 COX6B2Q6YFQ2 88 aa4.28□□□□□ -1.72
CAST-236ENST00000511782 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
CAST-236ENST00000511782 KIAA1109Q2LD37 5005 aa4.27□□□□□ -1.73
CAST-236ENST00000511782 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
CAST-236ENST00000511782 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
CAST-236ENST00000511782 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
CAST-236ENST00000511782 RYR1P21817 5038 aa4.24□□□□□ -1.73
CAST-236ENST00000511782 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
CAST-236ENST00000511782 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
CAST-236ENST00000511782 A0A0D9SG42 100 aa4.18□□□□□ -1.74
CAST-236ENST00000511782 P0C880 135 aa4.17□□□□□ -1.74
CAST-236ENST00000511782 XP32Q5T750 250 aa4.17□□□□□ -1.74
CAST-236ENST00000511782 SEC61BP60468 96 aaKnown RBP4.15□□□□□ -1.74
CAST-236ENST00000511782 RPL37P61927 97 aaKnown RBP4.15□□□□□ -1.75
CAST-236ENST00000511782 Q5VSD8 79 aa4.12□□□□□ -1.75
CAST-236ENST00000511782 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
CAST-236ENST00000511782 S4R3F8 94 aa4.11□□□□□ -1.75
CAST-236ENST00000511782 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
CAST-236ENST00000511782 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
CAST-236ENST00000511782 K7ERS5 55 aa4.09□□□□□ -1.76
CAST-236ENST00000511782 MT1HL1P0DM35 61 aa4.07□□□□□ -1.76
CAST-236ENST00000511782 MUC2Q02817 5179 aa4.06□□□□□ -1.76
CAST-236ENST00000511782 BIRC6Q9NR09 4857 aa4.06□□□□□ -1.76
CAST-236ENST00000511782 MUC17Q685J3 4493 aa4.05□□□□□ -1.76
CAST-236ENST00000511782 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
CAST-236ENST00000511782 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
CAST-236ENST00000511782 KRTAP4-5Q9BYR2 181 aa4.02□□□□□ -1.77
CAST-236ENST00000511782 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
CAST-236ENST00000511782 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
CAST-236ENST00000511782 HERC2O95714 4834 aa3.96□□□□□ -1.78
CAST-236ENST00000511782 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
CAST-236ENST00000511782 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
CAST-236ENST00000511782 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
CAST-236ENST00000511782 LCE2BO14633 110 aa3.89□□□□□ -1.79
CAST-236ENST00000511782 KRTAP4-1Q9BYQ7 146 aa3.88□□□□□ -1.79
CAST-236ENST00000511782 M0QZ58 72 aa3.88□□□□□ -1.79
CAST-236ENST00000511782 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
CAST-236ENST00000511782 HERC1Q15751 4861 aa3.83□□□□□ -1.8
CAST-236ENST00000511782 R4GN34 69 aa3.83□□□□□ -1.8
CAST-236ENST00000511782 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
CAST-236ENST00000511782 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
CAST-236ENST00000511782 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
CAST-236ENST00000511782 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
CAST-236ENST00000511782 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
CAST-236ENST00000511782 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
CAST-236ENST00000511782 RNF213Q63HN8 5207 aa3.71□□□□□ -1.82
CAST-236ENST00000511782 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
CAST-236ENST00000511782 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
CAST-236ENST00000511782 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
CAST-236ENST00000511782 LCE2CQ5TA81 110 aa3.65□□□□□ -1.82
CAST-236ENST00000511782 LCE2AQ5TA79 106 aaPredicted RBP3.64□□□□□ -1.83
CAST-236ENST00000511782 UBR4Q5T4S7 5183 aa3.62□□□□□ -1.83
CAST-236ENST00000511782 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
CAST-236ENST00000511782 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
CAST-236ENST00000511782 KRTAP19-1Q8IUB9 90 aa3.49□□□□□ -1.85
CAST-236ENST00000511782 TNP1P09430 55 aa3.48□□□□□ -1.85
CAST-236ENST00000511782 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
CAST-236ENST00000511782 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
CAST-236ENST00000511782 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
CAST-236ENST00000511782 MT1FP04733 61 aa3.4□□□□□ -1.87
CAST-236ENST00000511782 MT1HP80294 61 aa3.39□□□□□ -1.87
CAST-236ENST00000511782 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
CAST-236ENST00000511782 M0R2T5 61 aa3.36□□□□□ -1.87
CAST-236ENST00000511782 MT2AP02795 61 aa3.36□□□□□ -1.87
CAST-236ENST00000511782 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
CAST-236ENST00000511782 USH2AO75445 5202 aa3.36□□□□□ -1.87
CAST-236ENST00000511782 KRTAP9-8Q9BYQ0 159 aa3.35□□□□□ -1.87
CAST-236ENST00000511782 KMT2DO14686 5537 aa3.35□□□□□ -1.87
CAST-236ENST00000511782 KRTAP10-10P60014 251 aa3.33□□□□□ -1.88
CAST-236ENST00000511782 MT1BP07438 61 aa3.29□□□□□ -1.88
CAST-236ENST00000511782 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
CAST-236ENST00000511782 MT1XP80297 61 aa3.29□□□□□ -1.88
CAST-236ENST00000511782 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
CAST-236ENST00000511782 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
CAST-236ENST00000511782 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
CAST-236ENST00000511782 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
CAST-236ENST00000511782 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
CAST-236ENST00000511782 INE1O15225 51 aa3.24□□□□□ -1.89
CAST-236ENST00000511782 KRTAP10-7P60409 375 aaPredicted RBP3.24□□□□□ -1.89
CAST-236ENST00000511782 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
CAST-236ENST00000511782 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
CAST-236ENST00000511782 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
CAST-236ENST00000511782 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
CAST-236ENST00000511782 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
CAST-236ENST00000511782 KRTAP4-8A0A0G2JLE6 195 aa3.13□□□□□ -1.91
CAST-236ENST00000511782 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
CAST-236ENST00000511782 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
CAST-236ENST00000511782 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
CAST-236ENST00000511782 KRTAP4-7Q9BYR0 210 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms