RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 DNAH11Q96DT5 4516 aa1.78□□□□□ -2.13
MATR3-216ENST00000511249 ANK2Q01484 3957 aa1.77□□□□□ -2.13
MATR3-216ENST00000511249 DOPEY1Q5JWR5 2465 aa1.77□□□□□ -2.13
MATR3-216ENST00000511249 CCDC168Q8NDH2 2452 aa1.77□□□□□ -2.13
MATR3-216ENST00000511249 DYNC2H1Q8NCM8 4307 aaKnown RBP1.77□□□□□ -2.13
MATR3-216ENST00000511249 CENPEQ02224 2701 aa1.77□□□□□ -2.13
MATR3-216ENST00000511249 DNAH3Q8TD57 4116 aa1.76□□□□□ -2.13
MATR3-216ENST00000511249 Q5VSD8 79 aa1.76□□□□□ -2.13
MATR3-216ENST00000511249 TENM4Q6N022 2769 aa1.76□□□□□ -2.13
MATR3-216ENST00000511249 FAM208BQ5VWN6 2430 aa1.75□□□□□ -2.13
MATR3-216ENST00000511249 PRKDCP78527 4128 aaKnown RBP1.74□□□□□ -2.13
MATR3-216ENST00000511249 HELZ2Q9BYK8 2649 aaKnown RBP1.74□□□□□ -2.13
MATR3-216ENST00000511249 DNAH6Q9C0G6 4158 aa1.74□□□□□ -2.13
MATR3-216ENST00000511249 DNAH7Q8WXX0 4024 aa1.74□□□□□ -2.13
MATR3-216ENST00000511249 ACANP16112 2415 aa1.74□□□□□ -2.13
MATR3-216ENST00000511249 CHD8Q9HCK8 2581 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 DNAH10Q8IVF4 4471 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 PIEZO1Q92508 2521 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 PKD1L2Q7Z442 2459 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 MUC3AQ02505 3323 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 EPG5Q9HCE0 2579 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 CMYA5Q8N3K9 4069 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 LYSTQ99698 3801 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 DNAH9Q9NYC9 4486 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 HIVEP1P15822 2718 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 MYCBP2O75592 4640 aa1.73□□□□□ -2.13
MATR3-216ENST00000511249 CSMD2Q7Z408 3487 aa1.72□□□□□ -2.13
MATR3-216ENST00000511249 USP9YO00507 2555 aaPredicted RBP1.72□□□□□ -2.13
MATR3-216ENST00000511249 DNAH2Q9P225 4427 aa1.72□□□□□ -2.13
MATR3-216ENST00000511249 HECTD1Q9ULT8 2610 aa1.72□□□□□ -2.13
MATR3-216ENST00000511249 PDZD2O15018 2839 aa1.72□□□□□ -2.13
MATR3-216ENST00000511249 TGP01266 2768 aa1.71□□□□□ -2.14
MATR3-216ENST00000511249 CSMD3Q7Z407 3707 aa1.71□□□□□ -2.14
MATR3-216ENST00000511249 TTC28Q96AY4 2481 aa1.71□□□□□ -2.14
MATR3-216ENST00000511249 COL6A5A8TX70 2615 aa1.71□□□□□ -2.14
MATR3-216ENST00000511249 CFAP46Q8IYW2 2715 aa1.71□□□□□ -2.14
MATR3-216ENST00000511249 CUBNO60494 3623 aa1.69□□□□□ -2.14
MATR3-216ENST00000511249 FBN2P35556 2912 aa1.69□□□□□ -2.14
MATR3-216ENST00000511249 ZANQ9Y493 2812 aa1.69□□□□□ -2.14
MATR3-216ENST00000511249 HUWE1Q7Z6Z7 4374 aaKnown RBP1.69□□□□□ -2.14
MATR3-216ENST00000511249 LRRK2Q5S007 2527 aa1.69□□□□□ -2.14
MATR3-216ENST00000511249 KRTAP21-3Q3LHN1 58 aa1.68□□□□□ -2.14
MATR3-216ENST00000511249 SMR3AQ99954 134 aa1.68□□□□□ -2.14
MATR3-216ENST00000511249 HECTD4Q9Y4D8 3996 aa1.68□□□□□ -2.14
MATR3-216ENST00000511249 SETD2Q9BYW2 2564 aaPredicted RBP1.67□□□□□ -2.14
MATR3-216ENST00000511249 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
MATR3-216ENST00000511249 NBEAL1Q6ZS30 2694 aa1.67□□□□□ -2.14
MATR3-216ENST00000511249 SACSQ9NZJ4 4579 aa1.67□□□□□ -2.14
MATR3-216ENST00000511249 ABCA12Q86UK0 2595 aa1.66□□□□□ -2.14
MATR3-216ENST00000511249 FASNP49327 2511 aaKnown RBP1.66□□□□□ -2.14
MATR3-216ENST00000511249 COL7A1Q02388 2944 aa1.66□□□□□ -2.14
MATR3-216ENST00000511249 DMBT1Q9UGM3 2413 aaPredicted RBP1.66□□□□□ -2.14
MATR3-216ENST00000511249 ACACBO00763 2458 aa1.65□□□□□ -2.14
MATR3-216ENST00000511249 ZNF292O60281 2723 aa1.65□□□□□ -2.15
MATR3-216ENST00000511249 STAB2Q8WWQ8 2551 aa1.64□□□□□ -2.15
MATR3-216ENST00000511249 APOBP04114 4563 aaKnown RBP1.64□□□□□ -2.15
MATR3-216ENST00000511249 C9orf92A6NGG3 77 aa1.64□□□□□ -2.15
MATR3-216ENST00000511249 TNP1P09430 55 aa1.64□□□□□ -2.15
MATR3-216ENST00000511249 BDP1A6H8Y1 2624 aa1.64□□□□□ -2.15
MATR3-216ENST00000511249 ITPR3Q14573 2671 aa1.63□□□□□ -2.15
MATR3-216ENST00000511249 CRCT1Q9UGL9 99 aa1.63□□□□□ -2.15
MATR3-216ENST00000511249 PKD1L1Q8TDX9 2849 aa1.63□□□□□ -2.15
MATR3-216ENST00000511249 ITPR2Q14571 2701 aa1.63□□□□□ -2.15
MATR3-216ENST00000511249 CACNA1AO00555 2505 aa1.63□□□□□ -2.15
MATR3-216ENST00000511249 MYO18BQ8IUG5 2567 aa1.61□□□□□ -2.15
MATR3-216ENST00000511249 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
MATR3-216ENST00000511249 PKHD1L1Q86WI1 4243 aa1.61□□□□□ -2.15
MATR3-216ENST00000511249 ATRQ13535 2644 aa1.61□□□□□ -2.15
MATR3-216ENST00000511249 POLQO75417 2590 aa1.6□□□□□ -2.15
MATR3-216ENST00000511249 FBN3Q75N90 2809 aa1.6□□□□□ -2.15
MATR3-216ENST00000511249 TENM3Q9P273 2699 aa1.6□□□□□ -2.15
MATR3-216ENST00000511249 KMT2AQ03164 3969 aa1.59□□□□□ -2.15
MATR3-216ENST00000511249 PLECQ15149 4684 aaKnown RBP1.59□□□□□ -2.16
MATR3-216ENST00000511249 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
MATR3-216ENST00000511249 NOTCH1P46531 2555 aa1.58□□□□□ -2.16
MATR3-216ENST00000511249 PKD1P98161 4303 aa1.58□□□□□ -2.16
MATR3-216ENST00000511249 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
MATR3-216ENST00000511249 DYNC1H1Q14204 4646 aaKnown RBP1.57□□□□□ -2.16
MATR3-216ENST00000511249 FLNAP21333 2647 aaKnown RBP1.57□□□□□ -2.16
MATR3-216ENST00000511249 MAST4O15021 2626 aa1.56□□□□□ -2.16
MATR3-216ENST00000511249 TEP1Q99973 2627 aaKnown RBP1.56□□□□□ -2.16
MATR3-216ENST00000511249 DNAH5Q8TE73 4624 aa1.56□□□□□ -2.16
MATR3-216ENST00000511249 USP24Q9UPU5 2620 aa1.55□□□□□ -2.16
MATR3-216ENST00000511249 ZNF469Q96JG9 3925 aaPredicted RBP1.55□□□□□ -2.16
MATR3-216ENST00000511249 LRP1BQ9NZR2 4599 aa1.54□□□□□ -2.16
MATR3-216ENST00000511249 PKHD1P08F94 4074 aa1.54□□□□□ -2.16
MATR3-216ENST00000511249 FAT3Q8TDW7 4589 aa1.54□□□□□ -2.16
MATR3-216ENST00000511249 STARD9Q9P2P6 4700 aa1.54□□□□□ -2.16
MATR3-216ENST00000511249 TNXBP22105 4242 aa1.53□□□□□ -2.16
MATR3-216ENST00000511249 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.16
MATR3-216ENST00000511249 FLGP20930 4061 aaPredicted RBP1.53□□□□□ -2.17
MATR3-216ENST00000511249 HSPG2P98160 4391 aa1.52□□□□□ -2.17
MATR3-216ENST00000511249 FLNCQ14315 2725 aa1.52□□□□□ -2.17
MATR3-216ENST00000511249 MGAM2Q2M2H8 2515 aa1.51□□□□□ -2.17
MATR3-216ENST00000511249 FAT2Q9NYQ8 4349 aa1.51□□□□□ -2.17
MATR3-216ENST00000511249 NSD1Q96L73 2696 aaPredicted RBP1.51□□□□□ -2.17
MATR3-216ENST00000511249 FLNBO75369 2602 aaKnown RBP1.51□□□□□ -2.17
MATR3-216ENST00000511249 IGSF10Q6WRI0 2623 aa1.49□□□□□ -2.17
MATR3-216ENST00000511249 TENM1Q9UKZ4 2725 aa1.49□□□□□ -2.17
MATR3-216ENST00000511249 STAB1Q9NY15 2570 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms