RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
SNF8-210ENST00000511214 SACSQ9NZJ4 4579 aa4.87□□□□□ -1.63
SNF8-210ENST00000511214 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
SNF8-210ENST00000511214 K7ERS5 55 aa4.86□□□□□ -1.63
SNF8-210ENST00000511214 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
SNF8-210ENST00000511214 LRP1BQ9NZR2 4599 aa4.85□□□□□ -1.63
SNF8-210ENST00000511214 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
SNF8-210ENST00000511214 C9orf92A6NGG3 77 aa4.83□□□□□ -1.64
SNF8-210ENST00000511214 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
SNF8-210ENST00000511214 PKD1P98161 4303 aa4.83□□□□□ -1.64
SNF8-210ENST00000511214 KRTAP10-4P60372 401 aaPredicted RBP4.8□□□□□ -1.64
SNF8-210ENST00000511214 FAT2Q9NYQ8 4349 aa4.78□□□□□ -1.64
SNF8-210ENST00000511214 HYDINQ4G0P3 5121 aa4.78□□□□□ -1.64
SNF8-210ENST00000511214 RYR2Q92736 4967 aa4.76□□□□□ -1.65
SNF8-210ENST00000511214 A0A1B0GVY2 172 aa4.75□□□□□ -1.65
SNF8-210ENST00000511214 VPS13BQ7Z7G8 4022 aa4.75□□□□□ -1.65
SNF8-210ENST00000511214 SMR3BP02814 79 aaPredicted RBP4.74□□□□□ -1.65
SNF8-210ENST00000511214 KMT2CQ8NEZ4 4911 aaKnown RBP4.73□□□□□ -1.65
SNF8-210ENST00000511214 RYR3Q15413 4870 aa4.73□□□□□ -1.65
SNF8-210ENST00000511214 ROMO1P60602 79 aa4.73□□□□□ -1.65
SNF8-210ENST00000511214 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
SNF8-210ENST00000511214 RPL37P61927 97 aaKnown RBP4.72□□□□□ -1.65
SNF8-210ENST00000511214 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
SNF8-210ENST00000511214 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
SNF8-210ENST00000511214 KRTAP17-1Q9BYP8 105 aa4.68□□□□□ -1.66
SNF8-210ENST00000511214 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
SNF8-210ENST00000511214 KRTAP10-8P60410 259 aa4.66□□□□□ -1.66
SNF8-210ENST00000511214 S4R3F8 94 aa4.66□□□□□ -1.66
SNF8-210ENST00000511214 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.66
SNF8-210ENST00000511214 PKHD1P08F94 4074 aa4.63□□□□□ -1.67
SNF8-210ENST00000511214 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
SNF8-210ENST00000511214 DYNC1H1Q14204 4646 aaKnown RBP4.62□□□□□ -1.67
SNF8-210ENST00000511214 KRTAP13-4Q3LI77 160 aa4.61□□□□□ -1.67
SNF8-210ENST00000511214 FLG2Q5D862 2391 aaPredicted RBP4.61□□□□□ -1.67
SNF8-210ENST00000511214 KRTAP4-5Q9BYR2 181 aa4.6□□□□□ -1.67
SNF8-210ENST00000511214 EPPK1P58107 5090 aaKnown RBP4.57□□□□□ -1.68
SNF8-210ENST00000511214 A0A0D9SG42 100 aa4.55□□□□□ -1.68
SNF8-210ENST00000511214 TPRXLQ17RH7 258 aa4.54□□□□□ -1.68
SNF8-210ENST00000511214 CRIPTQ9P021 101 aa4.54□□□□□ -1.68
SNF8-210ENST00000511214 M0QZ58 72 aa4.53□□□□□ -1.68
SNF8-210ENST00000511214 P0C880 135 aa4.53□□□□□ -1.68
SNF8-210ENST00000511214 Q5VSD8 79 aa4.51□□□□□ -1.69
SNF8-210ENST00000511214 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
SNF8-210ENST00000511214 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
SNF8-210ENST00000511214 TNXBP22105 4242 aa4.5□□□□□ -1.69
SNF8-210ENST00000511214 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
SNF8-210ENST00000511214 FAT1Q14517 4588 aa4.5□□□□□ -1.69
SNF8-210ENST00000511214 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
SNF8-210ENST00000511214 KRTAP12-1P59990 96 aa4.49□□□□□ -1.69
SNF8-210ENST00000511214 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
SNF8-210ENST00000511214 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
SNF8-210ENST00000511214 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
SNF8-210ENST00000511214 LRP1Q07954 4544 aaKnown RBP4.46□□□□□ -1.7
SNF8-210ENST00000511214 HSPG2P98160 4391 aa4.45□□□□□ -1.7
SNF8-210ENST00000511214 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
SNF8-210ENST00000511214 RYR1P21817 5038 aa4.43□□□□□ -1.7
SNF8-210ENST00000511214 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
SNF8-210ENST00000511214 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
SNF8-210ENST00000511214 C10orf95Q9H7T3 257 aa4.42□□□□□ -1.7
SNF8-210ENST00000511214 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
SNF8-210ENST00000511214 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.71
SNF8-210ENST00000511214 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
SNF8-210ENST00000511214 HERC2O95714 4834 aa4.37□□□□□ -1.71
SNF8-210ENST00000511214 ABCA13Q86UQ4 5058 aa4.3□□□□□ -1.72
SNF8-210ENST00000511214 R4GN34 69 aa4.3□□□□□ -1.72
SNF8-210ENST00000511214 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
SNF8-210ENST00000511214 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
SNF8-210ENST00000511214 MYCBP2O75592 4640 aa4.26□□□□□ -1.73
SNF8-210ENST00000511214 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
SNF8-210ENST00000511214 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
SNF8-210ENST00000511214 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
SNF8-210ENST00000511214 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
SNF8-210ENST00000511214 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
SNF8-210ENST00000511214 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
SNF8-210ENST00000511214 LRP2P98164 4655 aa4.08□□□□□ -1.76
SNF8-210ENST00000511214 HERC1Q15751 4861 aa4.05□□□□□ -1.76
SNF8-210ENST00000511214 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
SNF8-210ENST00000511214 LPAP08519 4548 aa4.04□□□□□ -1.76
SNF8-210ENST00000511214 MUC17Q685J3 4493 aa4.03□□□□□ -1.76
SNF8-210ENST00000511214 TNP1P09430 55 aa4.01□□□□□ -1.77
SNF8-210ENST00000511214 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
SNF8-210ENST00000511214 HMCN2Q8NDA2 5059 aa3.96□□□□□ -1.78
SNF8-210ENST00000511214 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
SNF8-210ENST00000511214 SPRR2GQ9BYE4 73 aa3.88□□□□□ -1.79
SNF8-210ENST00000511214 FLGP20930 4061 aaPredicted RBP3.87□□□□□ -1.79
SNF8-210ENST00000511214 UBR4Q5T4S7 5183 aa3.86□□□□□ -1.79
SNF8-210ENST00000511214 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
SNF8-210ENST00000511214 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
SNF8-210ENST00000511214 KRTAP19-8Q3LI54 63 aa3.71□□□□□ -1.82
SNF8-210ENST00000511214 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
SNF8-210ENST00000511214 MT1HP80294 61 aa3.68□□□□□ -1.82
SNF8-210ENST00000511214 M0R2T5 61 aa3.67□□□□□ -1.82
SNF8-210ENST00000511214 MT2AP02795 61 aa3.67□□□□□ -1.82
SNF8-210ENST00000511214 MT1FP04733 61 aa3.64□□□□□ -1.83
SNF8-210ENST00000511214 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
SNF8-210ENST00000511214 MUC2Q02817 5179 aa3.64□□□□□ -1.83
SNF8-210ENST00000511214 INE1O15225 51 aa3.62□□□□□ -1.83
SNF8-210ENST00000511214 FAT4Q6V0I7 4981 aa3.61□□□□□ -1.83
SNF8-210ENST00000511214 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
SNF8-210ENST00000511214 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms