RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
USP38-202ENST00000510377 DNAH2Q9P225 4427 aa7.5□□□□□ -1.21
USP38-202ENST00000510377 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
USP38-202ENST00000510377 DNAH5Q8TE73 4624 aa7.44□□□□□ -1.22
USP38-202ENST00000510377 DNAH6Q9C0G6 4158 aa7.42□□□□□ -1.22
USP38-202ENST00000510377 FAT1Q14517 4588 aa7.41□□□□□ -1.22
USP38-202ENST00000510377 HECTD4Q9Y4D8 3996 aa7.4□□□□□ -1.22
USP38-202ENST00000510377 ALMS1Q8TCU4 4167 aa7.39□□□□□ -1.23
USP38-202ENST00000510377 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
USP38-202ENST00000510377 A0A0A0MQY5 61 aa7.38□□□□□ -1.23
USP38-202ENST00000510377 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
USP38-202ENST00000510377 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
USP38-202ENST00000510377 KRTAP10-4P60372 401 aaPredicted RBP7.34□□□□□ -1.23
USP38-202ENST00000510377 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
USP38-202ENST00000510377 VPS13BQ7Z7G8 4022 aa7.32□□□□□ -1.24
USP38-202ENST00000510377 DYNC2H1Q8NCM8 4307 aaKnown RBP7.27□□□□□ -1.24
USP38-202ENST00000510377 DYNC1H1Q14204 4646 aaKnown RBP7.22□□□□□ -1.25
USP38-202ENST00000510377 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
USP38-202ENST00000510377 MYCBP2O75592 4640 aa7.2□□□□□ -1.26
USP38-202ENST00000510377 HYDINQ4G0P3 5121 aa7.12□□□□□ -1.27
USP38-202ENST00000510377 MT1HL1P0DM35 61 aa7.12□□□□□ -1.27
USP38-202ENST00000510377 KIAA1109Q2LD37 5005 aa7.09□□□□□ -1.27
USP38-202ENST00000510377 SACSQ9NZJ4 4579 aa7.08□□□□□ -1.28
USP38-202ENST00000510377 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
USP38-202ENST00000510377 PKHD1P08F94 4074 aa7.04□□□□□ -1.28
USP38-202ENST00000510377 LRP1Q07954 4544 aaKnown RBP7.03□□□□□ -1.28
USP38-202ENST00000510377 TNP1P09430 55 aa6.99□□□□□ -1.29
USP38-202ENST00000510377 RYR1P21817 5038 aa6.99□□□□□ -1.29
USP38-202ENST00000510377 FAT2Q9NYQ8 4349 aa6.95□□□□□ -1.3
USP38-202ENST00000510377 RYR3Q15413 4870 aa6.94□□□□□ -1.3
USP38-202ENST00000510377 APOBP04114 4563 aaKnown RBP6.93□□□□□ -1.3
USP38-202ENST00000510377 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
USP38-202ENST00000510377 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
USP38-202ENST00000510377 FAT3Q8TDW7 4589 aa6.9□□□□□ -1.3
USP38-202ENST00000510377 PKD1P98161 4303 aa6.86□□□□□ -1.31
USP38-202ENST00000510377 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
USP38-202ENST00000510377 KMT2CQ8NEZ4 4911 aaKnown RBP6.83□□□□□ -1.32
USP38-202ENST00000510377 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
USP38-202ENST00000510377 RYR2Q92736 4967 aa6.72□□□□□ -1.33
USP38-202ENST00000510377 LRP2P98164 4655 aa6.72□□□□□ -1.33
USP38-202ENST00000510377 HSPG2P98160 4391 aa6.68□□□□□ -1.34
USP38-202ENST00000510377 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
USP38-202ENST00000510377 HERC2O95714 4834 aa6.63□□□□□ -1.35
USP38-202ENST00000510377 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
USP38-202ENST00000510377 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
USP38-202ENST00000510377 LPAP08519 4548 aa6.48□□□□□ -1.37
USP38-202ENST00000510377 EPPK1P58107 5090 aaKnown RBP6.47□□□□□ -1.37
USP38-202ENST00000510377 TNXBP22105 4242 aa6.4□□□□□ -1.39
USP38-202ENST00000510377 PRO2289Q9P1D8 64 aa6.29□□□□□ -1.4
USP38-202ENST00000510377 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
USP38-202ENST00000510377 PCLOQ9Y6V0 5065 aa6.25□□□□□ -1.41
USP38-202ENST00000510377 ABCA13Q86UQ4 5058 aa6.25□□□□□ -1.41
USP38-202ENST00000510377 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
USP38-202ENST00000510377 MT1HP80294 61 aa6.09□□□□□ -1.43
USP38-202ENST00000510377 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
USP38-202ENST00000510377 HERC1Q15751 4861 aa6.07□□□□□ -1.44
USP38-202ENST00000510377 MUC2Q02817 5179 aa6.06□□□□□ -1.44
USP38-202ENST00000510377 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
USP38-202ENST00000510377 SPRR2GQ9BYE4 73 aa6.01□□□□□ -1.45
USP38-202ENST00000510377 KRTAP19-2Q3LHN2 52 aa6□□□□□ -1.45
USP38-202ENST00000510377 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
USP38-202ENST00000510377 MT1FP04733 61 aa5.97□□□□□ -1.45
USP38-202ENST00000510377 MT2AP02795 61 aa5.96□□□□□ -1.45
USP38-202ENST00000510377 RNF213Q63HN8 5207 aa5.94□□□□□ -1.46
USP38-202ENST00000510377 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
USP38-202ENST00000510377 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.46
USP38-202ENST00000510377 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
USP38-202ENST00000510377 INE1O15225 51 aa5.87□□□□□ -1.47
USP38-202ENST00000510377 FAT4Q6V0I7 4981 aa5.84□□□□□ -1.47
USP38-202ENST00000510377 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
USP38-202ENST00000510377 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
USP38-202ENST00000510377 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
USP38-202ENST00000510377 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
USP38-202ENST00000510377 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
USP38-202ENST00000510377 MT1XP80297 61 aa5.68□□□□□ -1.5
USP38-202ENST00000510377 KRTAP10-5P60370 271 aa5.66□□□□□ -1.5
USP38-202ENST00000510377 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
USP38-202ENST00000510377 MT1BP07438 61 aa5.65□□□□□ -1.5
USP38-202ENST00000510377 HMCN2Q8NDA2 5059 aa5.65□□□□□ -1.51
USP38-202ENST00000510377 KRTAP19-8Q3LI54 63 aa5.63□□□□□ -1.51
USP38-202ENST00000510377 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
USP38-202ENST00000510377 CRCT1Q9UGL9 99 aa5.55□□□□□ -1.52
USP38-202ENST00000510377 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
USP38-202ENST00000510377 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
USP38-202ENST00000510377 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
USP38-202ENST00000510377 KRTAP9-3Q9BYQ3 159 aa5.42□□□□□ -1.54
USP38-202ENST00000510377 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
USP38-202ENST00000510377 LCE2BO14633 110 aa5.32□□□□□ -1.56
USP38-202ENST00000510377 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
USP38-202ENST00000510377 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
USP38-202ENST00000510377 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
USP38-202ENST00000510377 USH2AO75445 5202 aa5.18□□□□□ -1.58
USP38-202ENST00000510377 KMT2DO14686 5537 aa5.18□□□□□ -1.58
USP38-202ENST00000510377 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
USP38-202ENST00000510377 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
USP38-202ENST00000510377 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
USP38-202ENST00000510377 MT1GP13640 62 aa5.03□□□□□ -1.6
USP38-202ENST00000510377 MT1LQ93083 61 aa4.99□□□□□ -1.61
USP38-202ENST00000510377 SPRR2EP22531 72 aa4.98□□□□□ -1.61
USP38-202ENST00000510377 SPRR2BP35325 72 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms