RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 LINC00208Q96KT6 92 aa9.75□□□□□ -0.85
UBE2D3-229ENST00000510129 OCR1Q9BZK8 76 aa9.75□□□□□ -0.85
UBE2D3-229ENST00000510129 NDUFC1O43677 76 aa9.7□□□□□ -0.86
UBE2D3-229ENST00000510129 FCGBPQ9Y6R7 5405 aaPredicted RBP9.68□□□□□ -0.86
UBE2D3-229ENST00000510129 KRTAP9-7A8MTY7 169 aa9.68□□□□□ -0.86
UBE2D3-229ENST00000510129 H3BPC8 53 aa9.68□□□□□ -0.86
UBE2D3-229ENST00000510129 KLKP1Q107X0 134 aa9.68□□□□□ -0.86
UBE2D3-229ENST00000510129 IMUPQ9GZP8 106 aa9.67□□□□□ -0.86
UBE2D3-229ENST00000510129 SCGB1A1P11684 91 aa9.65□□□□□ -0.86
UBE2D3-229ENST00000510129 SPRR2GQ9BYE4 73 aa9.65□□□□□ -0.86
UBE2D3-229ENST00000510129 CRIPTQ9P021 101 aa9.64□□□□□ -0.87
UBE2D3-229ENST00000510129 H0YAA0 97 aa9.6□□□□□ -0.87
UBE2D3-229ENST00000510129 Q5VV11 94 aa9.6□□□□□ -0.87
UBE2D3-229ENST00000510129 LOC100996750A0A140TA64 210 aa9.58□□□□□ -0.88
UBE2D3-229ENST00000510129 KRTAP4-6Q9BYQ5 205 aa9.58□□□□□ -0.88
UBE2D3-229ENST00000510129 KRTAP19-8Q3LI54 63 aa9.56□□□□□ -0.88
UBE2D3-229ENST00000510129 K7ERU9 68 aa9.54□□□□□ -0.88
UBE2D3-229ENST00000510129 H3BS24 57 aa9.53□□□□□ -0.88
UBE2D3-229ENST00000510129 MT1BP07438 61 aa9.49□□□□□ -0.89
UBE2D3-229ENST00000510129 SMIM20Q8N5G0 67 aa9.47□□□□□ -0.89
UBE2D3-229ENST00000510129 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
UBE2D3-229ENST00000510129 A6NN06 94 aa9.44□□□□□ -0.9
UBE2D3-229ENST00000510129 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
UBE2D3-229ENST00000510129 MT-ATP8P03928 68 aa9.4□□□□□ -0.9
UBE2D3-229ENST00000510129 MACF1Q9UPN3 7388 aaKnown RBP9.38□□□□□ -0.91
UBE2D3-229ENST00000510129 TRAV7A0A075B6U4 112 aa9.37□□□□□ -0.91
UBE2D3-229ENST00000510129 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
UBE2D3-229ENST00000510129 KRTAP10-5P60370 271 aa9.31□□□□□ -0.92
UBE2D3-229ENST00000510129 ACYP2P14621 99 aa9.28□□□□□ -0.92
UBE2D3-229ENST00000510129 KRTAP6-3Q3LI67 103 aa9.27□□□□□ -0.93
UBE2D3-229ENST00000510129 SPTSSBQ8NFR3 76 aa9.23□□□□□ -0.93
UBE2D3-229ENST00000510129 R4GN34 69 aa9.23□□□□□ -0.93
UBE2D3-229ENST00000510129 SYNE2Q8WXH0 6885 aaKnown RBP9.23□□□□□ -0.93
UBE2D3-229ENST00000510129 P0C880 135 aa9.15□□□□□ -0.94
UBE2D3-229ENST00000510129 PLAC4Q8WY50 150 aa9.14□□□□□ -0.95
UBE2D3-229ENST00000510129 PRO2289Q9P1D8 64 aa9.13□□□□□ -0.95
UBE2D3-229ENST00000510129 M0QZ58 72 aa9.12□□□□□ -0.95
UBE2D3-229ENST00000510129 CHKB-CPT1BH3BT56 60 aa9.11□□□□□ -0.95
UBE2D3-229ENST00000510129 SERP2Q8N6R1 65 aa9.1□□□□□ -0.95
UBE2D3-229ENST00000510129 SNURFQ9Y675 71 aa9.09□□□□□ -0.95
UBE2D3-229ENST00000510129 SPANXA2-OT1Q8N9U9 137 aa9.08□□□□□ -0.96
UBE2D3-229ENST00000510129 KRTAP4-8Q9BYQ9 185 aa8.97□□□□□ -0.97
UBE2D3-229ENST00000510129 LINC01554Q52M75 96 aa8.95□□□□□ -0.98
UBE2D3-229ENST00000510129 MT1XP80297 61 aa8.93□□□□□ -0.98
UBE2D3-229ENST00000510129 KRTAP5-9P26371 169 aa8.89□□□□□ -0.99
UBE2D3-229ENST00000510129 COX7CP15954 63 aa8.82□□□□□ -1
UBE2D3-229ENST00000510129 KRTAP12-2P59991 146 aa8.79□□□□□ -1
UBE2D3-229ENST00000510129 KRTAP4-12Q9BQ66 201 aa8.79□□□□□ -1
UBE2D3-229ENST00000510129 KRTAP19-4Q3LI73 84 aa8.78□□□□□ -1
UBE2D3-229ENST00000510129 COA5Q86WW8 74 aa8.75□□□□□ -1.01
UBE2D3-229ENST00000510129 SEC61GP60059 68 aa8.69□□□□□ -1.02
UBE2D3-229ENST00000510129 KRTAP8-1Q8IUC2 63 aa8.67□□□□□ -1.02
UBE2D3-229ENST00000510129 NEBP20929 6669 aa8.66□□□□□ -1.02
UBE2D3-229ENST00000510129 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.02
UBE2D3-229ENST00000510129 H7BZZ5 65 aa8.64□□□□□ -1.03
UBE2D3-229ENST00000510129 SPRR2FQ96RM1 72 aa8.63□□□□□ -1.03
UBE2D3-229ENST00000510129 MUC12Q9UKN1 5478 aa8.61□□□□□ -1.03
UBE2D3-229ENST00000510129 KMT2DO14686 5537 aa8.58□□□□□ -1.04
UBE2D3-229ENST00000510129 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
UBE2D3-229ENST00000510129 LCE3BQ5TA77 95 aa8.56□□□□□ -1.04
UBE2D3-229ENST00000510129 ANAPC13Q9BS18 74 aa8.56□□□□□ -1.04
UBE2D3-229ENST00000510129 KRTAP10-12P60413 245 aa8.53□□□□□ -1.04
UBE2D3-229ENST00000510129 KRTAP20-1Q3LI63 56 aa8.53□□□□□ -1.04
UBE2D3-229ENST00000510129 CYSTM1Q9H1C7 97 aa8.53□□□□□ -1.04
UBE2D3-229ENST00000510129 CAMK2N1Q7Z7J9 78 aa8.51□□□□□ -1.05
UBE2D3-229ENST00000510129 KRTAP10-7P60409 375 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-229ENST00000510129 SPRR2EP22531 72 aa8.48□□□□□ -1.05
UBE2D3-229ENST00000510129 SPRR2BP35325 72 aa8.48□□□□□ -1.05
UBE2D3-229ENST00000510129 SPRR2AP35326 72 aa8.48□□□□□ -1.05
UBE2D3-229ENST00000510129 KRTAP4-8A0A0G2JLE6 195 aa8.46□□□□□ -1.06
UBE2D3-229ENST00000510129 A0A1B0GU33 70 aa8.46□□□□□ -1.06
UBE2D3-229ENST00000510129 MDN1Q9NU22 5596 aa8.38□□□□□ -1.07
UBE2D3-229ENST00000510129 A0A1B0GU69 56 aa8.37□□□□□ -1.07
UBE2D3-229ENST00000510129 A0A0D9SG42 100 aa8.36□□□□□ -1.07
UBE2D3-229ENST00000510129 KRTAP2-3P0C7H8 128 aa8.36□□□□□ -1.07
UBE2D3-229ENST00000510129 LCE1AQ5T7P2 110 aa8.36□□□□□ -1.07
UBE2D3-229ENST00000510129 KRTAP2-4Q9BYR9 128 aa8.36□□□□□ -1.07
UBE2D3-229ENST00000510129 ATP5EP56381 51 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-229ENST00000510129 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
UBE2D3-229ENST00000510129 KRTAP9-9Q9BYP9 154 aa8.32□□□□□ -1.08
UBE2D3-229ENST00000510129 KRTAP9-4Q9BYQ2 154 aa8.32□□□□□ -1.08
UBE2D3-229ENST00000510129 CCDC179H3BU77 68 aa8.3□□□□□ -1.08
UBE2D3-229ENST00000510129 SPINT4Q6UDR6 99 aa8.28□□□□□ -1.08
UBE2D3-229ENST00000510129 SMIM26A0A096LP01 95 aa8.26□□□□□ -1.09
UBE2D3-229ENST00000510129 PRR15LQ9BU68 103 aa8.22□□□□□ -1.09
UBE2D3-229ENST00000510129 SPRR2DP22532 72 aa8.21□□□□□ -1.1
UBE2D3-229ENST00000510129 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
UBE2D3-229ENST00000510129 LCE4AQ5TA78 99 aa8.17□□□□□ -1.1
UBE2D3-229ENST00000510129 TMEM258P61165 79 aa8.12□□□□□ -1.11
UBE2D3-229ENST00000510129 KRTAP2-2Q9BYT5 123 aa8.11□□□□□ -1.11
UBE2D3-229ENST00000510129 KRTAP2-1Q9BYU5 128 aa8.11□□□□□ -1.11
UBE2D3-229ENST00000510129 LINC01558Q9Y6Z2 57 aa8.06□□□□□ -1.12
UBE2D3-229ENST00000510129 LCE1DQ5T752 114 aa8.05□□□□□ -1.12
UBE2D3-229ENST00000510129 A8MU10 97 aa8.04□□□□□ -1.12
UBE2D3-229ENST00000510129 KRTAP19-7Q3SYF9 63 aa7.98□□□□□ -1.13
UBE2D3-229ENST00000510129 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
UBE2D3-229ENST00000510129 MT1EP04732 61 aa7.92□□□□□ -1.14
UBE2D3-229ENST00000510129 UQCR11O14957 56 aa7.9□□□□□ -1.14
UBE2D3-229ENST00000510129 TNP1P09430 55 aa7.88□□□□□ -1.15
UBE2D3-229ENST00000510129 LCE5AQ5TCM9 118 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms