RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 LOC101927531A0A1B0GV80 90 aa3.7□□□□□ -1.82
TRAPPC11-206ENST00000509857 DNAH5Q8TE73 4624 aa3.69□□□□□ -1.82
TRAPPC11-206ENST00000509857 OXTP01178 125 aa3.69□□□□□ -1.82
TRAPPC11-206ENST00000509857 LINC00313P59037 77 aa3.69□□□□□ -1.82
TRAPPC11-206ENST00000509857 C1orf195Q5TG92 126 aa3.69□□□□□ -1.82
TRAPPC11-206ENST00000509857 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
TRAPPC11-206ENST00000509857 V9GYY9 64 aa3.67□□□□□ -1.82
TRAPPC11-206ENST00000509857 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
TRAPPC11-206ENST00000509857 NDUFS5O43920 106 aa3.66□□□□□ -1.82
TRAPPC11-206ENST00000509857 LINC00304Q8N9R0 145 aa3.66□□□□□ -1.82
TRAPPC11-206ENST00000509857 PKD1P98161 4303 aa3.65□□□□□ -1.82
TRAPPC11-206ENST00000509857 KRTAP10-4P60372 401 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC11-206ENST00000509857 Q1T7F1 81 aa3.64□□□□□ -1.83
TRAPPC11-206ENST00000509857 FP248Q71RG6 208 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC11-206ENST00000509857 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
TRAPPC11-206ENST00000509857 Q5W150 140 aa3.61□□□□□ -1.83
TRAPPC11-206ENST00000509857 SACSQ9NZJ4 4579 aa3.59□□□□□ -1.83
TRAPPC11-206ENST00000509857 LRP1BQ9NZR2 4599 aa3.59□□□□□ -1.83
TRAPPC11-206ENST00000509857 C4orf26Q17RF5 130 aa3.59□□□□□ -1.83
TRAPPC11-206ENST00000509857 HYDINQ4G0P3 5121 aa3.59□□□□□ -1.84
TRAPPC11-206ENST00000509857 ACYP2P14621 99 aa3.58□□□□□ -1.84
TRAPPC11-206ENST00000509857 COA5Q86WW8 74 aa3.58□□□□□ -1.84
TRAPPC11-206ENST00000509857 PKHD1P08F94 4074 aa3.57□□□□□ -1.84
TRAPPC11-206ENST00000509857 PCOTHQ58A44 107 aa3.57□□□□□ -1.84
TRAPPC11-206ENST00000509857 DMAC1Q96GE9 116 aa3.57□□□□□ -1.84
TRAPPC11-206ENST00000509857 C20orf166-AS1Q96NR2 134 aa3.57□□□□□ -1.84
TRAPPC11-206ENST00000509857 A8MUU9 505 aa3.56□□□□□ -1.84
TRAPPC11-206ENST00000509857 SMR3BP02814 79 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC11-206ENST00000509857 DYNC1H1Q14204 4646 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-206ENST00000509857 A8MUN3 132 aa3.55□□□□□ -1.84
TRAPPC11-206ENST00000509857 C7orf65Q6ZTY9 151 aa3.54□□□□□ -1.84
TRAPPC11-206ENST00000509857 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
TRAPPC11-206ENST00000509857 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
TRAPPC11-206ENST00000509857 HRES1P13985 223 aa3.53□□□□□ -1.84
TRAPPC11-206ENST00000509857 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
TRAPPC11-206ENST00000509857 FLG2Q5D862 2391 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-206ENST00000509857 APOBP04114 4563 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-206ENST00000509857 Q5VSD8 79 aa3.5□□□□□ -1.85
TRAPPC11-206ENST00000509857 RYR2Q92736 4967 aa3.49□□□□□ -1.85
TRAPPC11-206ENST00000509857 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
TRAPPC11-206ENST00000509857 Q5VV11 94 aa3.48□□□□□ -1.85
TRAPPC11-206ENST00000509857 SPTSSBQ8NFR3 76 aa3.47□□□□□ -1.85
TRAPPC11-206ENST00000509857 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
TRAPPC11-206ENST00000509857 PSPHP1O15172 72 aa3.45□□□□□ -1.86
TRAPPC11-206ENST00000509857 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
TRAPPC11-206ENST00000509857 RETNLBQ9BQ08 111 aa3.44□□□□□ -1.86
TRAPPC11-206ENST00000509857 DMBT1Q9UGM3 2413 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-206ENST00000509857 C9orf92A6NGG3 77 aa3.42□□□□□ -1.86
TRAPPC11-206ENST00000509857 RPL37P61927 97 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-206ENST00000509857 ATP11AUNQ6ZP68 121 aa3.42□□□□□ -1.86
TRAPPC11-206ENST00000509857 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
TRAPPC11-206ENST00000509857 FAT1Q14517 4588 aa3.42□□□□□ -1.86
TRAPPC11-206ENST00000509857 KMT2CQ8NEZ4 4911 aaKnown RBP3.41□□□□□ -1.86
TRAPPC11-206ENST00000509857 MT1HL1P0DM35 61 aa3.41□□□□□ -1.86
TRAPPC11-206ENST00000509857 SPINK7P58062 85 aa3.41□□□□□ -1.86
TRAPPC11-206ENST00000509857 A6NED7 52 aa3.4□□□□□ -1.87
TRAPPC11-206ENST00000509857 COX6B2Q6YFQ2 88 aa3.4□□□□□ -1.87
TRAPPC11-206ENST00000509857 TNXBP22105 4242 aa3.4□□□□□ -1.87
TRAPPC11-206ENST00000509857 HSPG2P98160 4391 aa3.4□□□□□ -1.87
TRAPPC11-206ENST00000509857 A0A1B0GU69 56 aa3.39□□□□□ -1.87
TRAPPC11-206ENST00000509857 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
TRAPPC11-206ENST00000509857 RYR1P21817 5038 aa3.37□□□□□ -1.87
TRAPPC11-206ENST00000509857 UQCR11O14957 56 aa3.36□□□□□ -1.87
TRAPPC11-206ENST00000509857 SPATA8Q6RVD6 105 aa3.34□□□□□ -1.87
TRAPPC11-206ENST00000509857 LCA10Q71F78 164 aa3.34□□□□□ -1.87
TRAPPC11-206ENST00000509857 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
TRAPPC11-206ENST00000509857 LRP1Q07954 4544 aaKnown RBP3.29□□□□□ -1.88
TRAPPC11-206ENST00000509857 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
TRAPPC11-206ENST00000509857 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
TRAPPC11-206ENST00000509857 RYR3Q15413 4870 aa3.28□□□□□ -1.88
TRAPPC11-206ENST00000509857 A6NN06 94 aa3.27□□□□□ -1.89
TRAPPC11-206ENST00000509857 H1FX-AS1Q4G0G2 97 aa3.26□□□□□ -1.89
TRAPPC11-206ENST00000509857 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
TRAPPC11-206ENST00000509857 S4R3F8 94 aa3.25□□□□□ -1.89
TRAPPC11-206ENST00000509857 A0A1B0GU33 70 aa3.24□□□□□ -1.89
TRAPPC11-206ENST00000509857 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
TRAPPC11-206ENST00000509857 KIAA1109Q2LD37 5005 aa3.23□□□□□ -1.89
TRAPPC11-206ENST00000509857 H0YAA0 97 aa3.21□□□□□ -1.9
TRAPPC11-206ENST00000509857 MYCBP2O75592 4640 aa3.2□□□□□ -1.9
TRAPPC11-206ENST00000509857 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
TRAPPC11-206ENST00000509857 CSAG1Q6PB30 78 aa3.19□□□□□ -1.9
TRAPPC11-206ENST00000509857 K7ERS5 55 aa3.18□□□□□ -1.9
TRAPPC11-206ENST00000509857 SPINT4Q6UDR6 99 aa3.17□□□□□ -1.9
TRAPPC11-206ENST00000509857 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
TRAPPC11-206ENST00000509857 M0QZ58 72 aa3.14□□□□□ -1.91
TRAPPC11-206ENST00000509857 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-206ENST00000509857 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.91
TRAPPC11-206ENST00000509857 LRP2P98164 4655 aa3.09□□□□□ -1.91
TRAPPC11-206ENST00000509857 ADM2Q7Z4H4 148 aa3.09□□□□□ -1.91
TRAPPC11-206ENST00000509857 HERC2O95714 4834 aa3.08□□□□□ -1.92
TRAPPC11-206ENST00000509857 P0C880 135 aa3.08□□□□□ -1.92
TRAPPC11-206ENST00000509857 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
TRAPPC11-206ENST00000509857 KRTAP19-2Q3LHN2 52 aa3.06□□□□□ -1.92
TRAPPC11-206ENST00000509857 KRTAP13-4Q3LI77 160 aa3.06□□□□□ -1.92
TRAPPC11-206ENST00000509857 KRTAP4-1Q9BYQ7 146 aa3.05□□□□□ -1.92
TRAPPC11-206ENST00000509857 MUC17Q685J3 4493 aa3.05□□□□□ -1.92
TRAPPC11-206ENST00000509857 ROMO1P60602 79 aa3.03□□□□□ -1.92
TRAPPC11-206ENST00000509857 CRIPTQ9P021 101 aa3.03□□□□□ -1.92
TRAPPC11-206ENST00000509857 ABCA13Q86UQ4 5058 aa3.01□□□□□ -1.93
TRAPPC11-206ENST00000509857 R4GN34 69 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms